Timm004760.1
Basic Information
- Insect
- Tetramorium immigrans
- Gene Symbol
- ct
- Assembly
- GCA_011636585.1
- Location
- VBVO01000174.1:61697-77838[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.8e-28 7.9e-24 84.1 0.0 2 72 499 570 498 575 0.95 2 3 1e-32 1.4e-28 99.3 0.0 2 77 907 983 906 985 0.96 3 3 1.4e-30 1.9e-26 92.5 0.0 3 75 1139 1212 1137 1216 0.95
Sequence Information
- Coding Sequence
- ATGAGATATACTCGCCAAGATTTAAAGTTATCCTCTCTTAAGCGTTCGCTATTGATTTCCGTATATATTcccgataaaattaataaagagcTTCTGGTAAGCTCCTTACTAGGTTCGGTCCCAGATAAACGATGCTCGAGGCGAATCGCGAAGAAGGGAGAGGAACTCATCAACCAGTTGGTTGAAGAGGTGTCCAGGCTACAGCAGAGCCTGCAACGCCTTCAGGAGACAAGCGCGCAGGCAACGGCGCGGCTCGAAGAAGAACTCGAAGTGCGTAGACAGCACATTAACAGATTGGAGAGCAAATTGGAACGGCAGAGGGACTATGATGACTTGAAGCGCGAAATCAGTGTACTGAGATCAGTCGATCTTTCGCAGATATCAACCGGTGAGCCTGGAAAAAGCTTAGAACATCTTCTTATGGAGCGCTTCAAGGCGCTCCAACAAGCCGAGAACCTGAAACCCTCCAATACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTGCCACCTACGTCCCATGTGTCCTCCCAGCAACCACCGCCACCGCCTCCGACAGCAGCCTCCCTCCCTCCACGTTCCACCCCGACGCCTTCTTCGGCCACTTCGACGACTTCGAGTCTCCTTTTTCCGCCACCCCTCCAGAACGTCGAGACCTTCGGCTCATTTCTCGGTGAAGAAATCGTCGCTAATTGGAGGCGGACATTGGAAAGGTCTATCATGAgtcaacagcagcagcagcagcagcagcagcaaccgccgccgcagcagcagcagcagcagcagcaaccgCAGCAATCACAGCCATCTCAATTAAGCCAGTTAACAACTCAACAGCAACAATTGCAACAAGCCCAACCGCACATGGGTTTACACCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCACCGGGTGCGGATCCGTCGTCCACCTCGAACACTCCGGTGAAATCGAACACGCCGATCGGTACAACGTCCCTGGGCAGTCTAGATGTCATTGAAAAAGCCCCAACGCCGGTATCGGGTCACGAGACGCCGGCACCTCCGACACCATCCTCCACAACCGCCTTGACATCGCCGCCAAGCTTCCAGCCACCGACGTCGCTGGTGGAAACCATAAGCACTCCTTCGGCTTCCATCAATGGCAGCGGTCTCACGTCCGGCGTACCGAGCGCACCACCCCCGAAGAGTCCGCCTGATCAAGAATCATgtcacaataataataatagccaTCATCTGGCGAATAACAATATCGGCGGACTGAGCGTCCTCGATACGCTGAAGAGTCCGTTTCGATTTGACGACAGAGCGTATCCCTTCCGATTCGGTGACGAGTTCGGTGCCGCCGGTATGGCCGGTCGGTTGGGCGAGTCCCTCATTCCAAAGGGCGATCCCATGGAGGCAAGACTGCAGGAAATGTTGCGTCATAATATGGATAAATACGCTTCGCAGAATCTTGATACTCTTCACATAGCCAGGCGAGTGCGCGAACTGTTGTCGATACACAATATCGGTCAGAGACTATTCGCTAAATACGTTCTTGGGCTAAGTCAAGGCACGGTCAGCGAATTACTTAGCAAGCCCAAGCCTTGGGACAAATTAACTGAGAAGGGCCGCGACAGTTATCGGAAGATGCACGGTTGGGCTTGCGACGAGAACGCTGTGCTGCTGCTCAAGTCTTTGATTCCCAAGAAAGAGTATGTTTCAGGCAAGGAACAAGGAATGCCAGCGTTCGCACGTGGACCACAGGATGGTGGTCCGCAGGAAATGAGTGACGAAAGATTGGCACATATTCTCTCGGAATCGAGCCATATGCAGATGAGAGGTGAACACGAGGTATCAAACGACGCAGACAGCAAGAGTCCGAGCAGAATCGGTTGTCCGAGTCCGTTCAACAAGGACAGATTGGACAGCCAAAATAGGAGACTGAAGAAGTACGAAAACGACGACATTCCCCAGGAGAAGGTGGTGAGGATTTATCAAGAAGAATTGGCCAAGCTGATGGGCACGAGAGTGGAGAATCTTCGTCCGCGAGAGTTTCCTAGTGCGATGTTTCCGCATTTTTTCAGTGGTACCCAGGGCAGTTTTCAAGGCATCGAACGCACCCAGGAAGACATTCGATTGGCATTGGACGCTTATCACCGTGAGCTTCAAAAACTGAATGCCACACCAGGTCAGAATTCCTCAATGGCCGGATTGCCAGGATTGCCTGGATTACCAGGTTTGCTGGCACTTCAGCAACAAGCTCTCCAACAACATCACTTAGCCGCgaacggcggcggtggtgttCAAGACTTGAGTTTAGGCAAAGTGGATCCGcgcaataaaatgataaacgGTGTGtcggaagaagagaaagaaaagatggaAGAGGCGATGAGACATGCCGGAAGTGCGTTCTCCTTGGTGAGGCCGAAGCAGGAATCGACGGGTCCTCAATCGACGCCCGGCGGTTCCAGCGCGAGTTCGCCGCTCGGCAATTCTATACTTCCCCCCGCGATGACACCCAACGAGGAATTCTCCAGTGCGGCGGCAGCCAGCCCTCTTCAGAGAATGGCCTCTATTACGAACAGTCTGATAAGTCAACCGTCCACCCCAACTCACCATTCGGCCAATCAAAGACCGCTGAAAGCTGTGCTTCCTCCGATCACCCAGCAGCAATTCGACATGTACAATAATCTTAATACTGAAGATATTGTGAAGAGGGTGAAGGAACAGCTGTCTCAGTATTCGATTTCGCAGCGGCTATTCGGCGAATCAGTATTGGGTCTATCTCAGGGATCAGTGTCAGACCTCCTCGCGCGTCCAAAACCATGGCACATGCTGACCCAAAAGGGCCGTGAGCCCTTCATCCGGATGAAAATGTTTCTCGAAGATGACAACGCGGTACACAAGCTCGTCGCCAGCCAGTACAAGATCGCGCCAGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGTGGAACGCCTATGAAACCAATGCCGCCAACGAAACTCGTCCAAGAACAACTTCAAAATGCAGCGAAGGCGCAGGCCGCCGCTCAAGCAGCCGCGCAAGCAGCGGCGCAACAGCATCAGCAGGAGAATCAGATGCAGCTCGGTCCGCCGCAGCAAAGTCCTCAGCTTCCGCAACATCCACAGCCACCGCCACCGATGATGTTGACCCCACCCGGACCGCATCATCCTCATACTCAGCTTAGCATGCAAGAACTCCAAAAgaaacagcagcagcagcagcaacaaatGTCACTACACTCGCCACATCATCAAATGGCACCGTCGCCTCTTAGAAGTCTTCATCCGCACATTTCACCAAGCGTATACGAAATGGCTGCTCTTACGCAAGATCTCGATACACAGACAATCACAACGAAGATCAAGGAAGCGTTGTTGGCTAACAACATCGGCCAGAAAATTTTTGGTGAAGCAGTTCTCGGTTTGTCACAGGGCTCTGTCAGTGAGCTGCTGAGCAAACCGAAACCGTGGCATATGCTCAGTATAAAAGGCCGAGAACCGTTCATTAGGATGCAACTTTGGCTAGCAGACGCACACAACGTCGATCGATTGCAGGCGTTGAAGAATGAACGACGAGAGGCGAACAAGAGACGACGTAGCAGCGGTCCTGGTCACGACAACAGCTCCGACACTTCGAGTAACGACACAGCCGAGTTCTATCACGCGGCATCACCTGGTCCGGGACCGACTACCGGGAAGAAGCAGCGTGTTCTCTTCTCGGAAGAACAGAAGGAAGCCCTCAGACTCGCCTTCGCCTTGGATCCGTATCCTAATGTGGCCACCATCGAATTTCTCGCCAGTGAACTCGCCCTGTCCTCGAGGACGATAACCAACTGGTTTCACAATCATCGAATGAGACTGAAGCAACAGACGCCGCACGGCCAACCGGAGCCGCAATCGCCGCGAGAACCCGGGCAACCGTTCGACCCTGTTCAATTCAGATTGTTATTGAACCAAAGACTGCTGGAGATTCAAAAGGAGAGATTAGGTCTAGGAAATGTACCCCTACCTTACTCTCCGTACTTTAATCCCAACCTGGCGGCGCTGGTAGGTAATGCATTGAAAGAACAATGTTCTGGTCTCGACCTCTCCATGAATGCCCTGAAGAGAGAGCCCAATCAAGAATTCGAGGACGAGGACGTCGAGGACGCGATGAGTAATCTAGGTAGCGAGGACTCGGAAGGTTCGGCCAACAGTATAAAGAGAGAACCCACAGAAACACCGTCGGCACCCACGACGGTCAGGTCCAATAGAAGAAAACCCGCGGCACCACAATGGGTGAATCCGGAATGGCAGGAACCAACGAGAGCGGGCGACGAAGTCATCATCAATGGCGTTTGCGTGATGCAGACGGACGATTACGGAGTAAAGAGAGAGGCCGAGGAAACTATAAGAATCGAGCCGACACCGGTGCAGGATCGATACGAGGAGGATGCTCAGAGCGATGTCTCTTCCGTGTCAGGCAACAATGGGGCCGATCGGGATAGTCCGCTTCCCAGTCCAAAGTCTGGCCAAAACAGTCCAACGACGTCGCTCAGACCGCCGTCGGCGCAACAGACGCAACAGTCCACGGAAGAAAGTCCGAAGGATGTGGTGAAACACGAACCCGAGGAAACGTGGGATTACTAG
- Protein Sequence
- MRYTRQDLKLSSLKRSLLISVYIPDKINKELLVSSLLGSVPDKRCSRRIAKKGEELINQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQISTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAASLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMSQQQQQQQQQQPPPQQQQQQQQPQQSQPSQLSQLTTQQQQLQQAQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPVKSNTPIGTTSLGSLDVIEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSLVETISTPSASINGSGLTSGVPSAPPPKSPPDQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRAYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGMPAFARGPQDGGPQEMSDERLAHILSESSHMQMRGEHEVSNDADSKSPSRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGTRVENLRPREFPSAMFPHFFSGTQGSFQGIERTQEDIRLALDAYHRELQKLNATPGQNSSMAGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQQHQQENQMQLGPPQQSPQLPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSANSIKREPTETPSAPTTVRSNRRKPAAPQWVNPEWQEPTRAGDEVIINGVCVMQTDDYGVKREAEETIRIEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPTTSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394913;
- 90% Identity
- iTF_00014519;
- 80% Identity
- iTF_01422115;