Ppal009897.1
Basic Information
- Insect
- Pseudomyrmex pallidus
- Gene Symbol
- ct
- Assembly
- GCA_014825455.1
- Location
- QVNV01009249.1:11737-26670[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6e-28 6.1e-24 84.1 0.0 2 72 446 517 445 522 0.95 2 3 1.3e-32 1.4e-28 98.9 0.0 3 77 857 932 855 934 0.96 3 3 5.4e-31 5.9e-27 93.8 0.0 3 75 1087 1160 1085 1164 0.95
Sequence Information
- Coding Sequence
- ATGCCCGAAGTAAATCGGAGGAGGGAAAAGCTCATCAACCAGTTGGTTGAAGAGGTGTCTAGGCTACAGCAGAACCTGCAACGCCTTCAGGAACAAAGTGCCCAAGCAACGGTGCGACTCGAAGAGGAACTCGAAGTGCGGAGGCAGCACATCAACAGACTGGAAAGTAAATTGGAGCGGCAGAGGGATTACGACGACCTAAAGCGCGAAATCAGTGTACTGAGATCGGTCGACCTCTCGCAGATACCAACCGGTGAGCCCGGAAAGAGTTTGGAACATCTTCTTATGGAACGCTTCAAGGCGCTCCAGCAAGCCGAGAACCTGAAATCCTCTAATACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCGTCACCCCACGGGGTTGGAGGTGTACCACCTACGTCCCATGTGTCCTCCCAACAACCACCGCCACCGCCTCCGACGGCAATCTCCCTCCCTCCGCGTTCCACTCCAACGCCTTCTTCGGCCTCTTCGACAACTTCAAACCTTCTCTTCCCGCCACCTCTTCAAAACGTCGAGACCTTTGGCTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGGTCTGCATCCGCCATCAACGCCAAGTAGTTTAAATCACCTGCCATCGCCGAGTGCGGATCCGTCGTCCACTTCGAATACGCCTGCAAAATCGAATACGCCGATAAGCACGGCTCCTCTAAGTAATTTAGACGTCACTGAGAAAGCTCCAACACCGGTATCGGGACATGAGACGCCAGCACCTCCAACACCATCCTCTACAACCGCCTTAACATCACCGCCGAGCTTCCAACCACCTACGTCGATGGTGGAAACCAATACCCCTTCGGCTTCCATCAACGGCGGCGGTCTCACACCCGGTGTTCCGAGCGCACCTCCTCCGAAAAGCCCGGCTGATCAAGAATCATGTCACAACAATAACAACAGCCACCATTTAGCGAACAATAACATCGGTGGTCTGAGCGTTCTCGACACACTAAAAAGTCCATTTCGGTTTGACGATCGAACGTATCCGTTCCGATTCGGTGACGAGTTCGGAGCTGCCGGTATGGCCGGTCGGCTGGGCGAGTCTCTCATTCCGAAGGGTGATCCCATGGAGGCGAGACTGCAAGAGATGTTACGTCACAATATGGACAAGTACGCCTCGCAAAATCTCGATACTCTTCACATAGCTAGACGAGTGCGGGAGTTGCTATCGATACATAATATCGGACAGAGATTGTTCGCCAAATATGTTCTCGGACTGAGTCAGGGCACGGTCAGCGAGTTACTTAGCAAACCCAAACCTTGGGACAAATTGACCGAAAAAGGCCGTGACAGCTATCGGAAGATGCACGGTTGGGCTTGCGACGATAACGCTGTAATGCTGCTCAAGTCCCTCATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCATTCGCACGTGGGCCACAGGATGGTGGTCCGCCAGAAATGAATGACGAAAGATTGGCACATATTCTCTCGGAGTCGAGCCATATGCAAATGAGGAGTGAGCACGAGGTGTCGAACGACGCAGATAGCAAGAGTCCGAACAGAATCGGTTGTCCGAGTCCATTCAACAAGGACAGACTAGACAGCCAAAATAGGAGACTGAAGAAGTACGAGAACGATGACATTCCTCAGGAGAAGGTGGTGAGAATTTATCAGGAAGAACTGGCCAAACTGATGGGCAGAAGAGTGGAAGACCTTCGTCCGCGAGAGTTTTCTAGTGCGATCTTTCCGCATTTTTTCAGTGGTACTCAAAGTGGTCTTCAAGGTATCGAGCGTACCCAAGAAGACATTCGACTGGCCTTGGACGCTTATCATCGTGAACTTCAAAAGTTGAACGCAGCACCAGGTCAGACACCCACGATGACTGGATTGCCAGGATTGCCCGGACTGCCAGGTTTGCTGGCGCTTCAGCAACAAGCTCTTCAGCAACATCATTTGGCCGCGAATGGCGGCGGAGGCGGGAGTGTTCAGGACTTGAGTTTAGGCAAAGTGGATCCGCGTAACAAAATGATAAACGGCGTGTCGGAAGAGGAGAAAGAGAAAATGGAAGAAGCGATGAGGCACGCAGGAAGTGCTTTCTCTCTGGTGAGACCAAAGCAAGAATCGACAGGCCCGCAATCGACGCCCGGCGGTTCCAGCGCGAGTTCACCGCTTGGCAATTCTATACTCCCTCCTGCAATGACACCTAGCGAAGAATTCTCTAGCGCGGCGGCAGCCAGTCCTCTTCAAAGGATGGCATCCATCACGAACAGTTTGATAAGCCAACCGTCCACGCCAACTCACCACTCGGCTAATCAAAGACCGTTGAAAGCTGTGCTTCCTCCAATCACCCAGCAACAGTTCGATCTGTATAATAATCTTAACACCGAAGATATTGTCAAAAGGGTGAAAGAACAGCTGTCTCAATATTCGATTTCACAGCGGCTATTCGGCGAGTCAGTATTGGGTTTGTCTCAAGGATCGGTATCGGACCTTCTAGCGCGTCCTAAACCATGGCACATGCTTACTCAAAAAGGTCGCGAACCCTTCATTCGAATGAAGATGTTCCTTGAAGATGACAACGCAGTACACAAGCTGGTTGCCAGTCAATACAAAATTGCTCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGTGGAACGCCTATGAAACCTATGCCGCCGACAAAACTCGTCCAAGAGCAACTGCAAAATGCGGCGAAGGCGCAGGCTGCTGCTCAAGCGGCCGCGCAAGCGGCGGCACAACAACATCAGCAGGAGAATCAGATGCAACTTGGCCCGCCTCAGCAAAGTCCTCAGCTTCCACAGCATCCGCAACCGCCACCGCCAATGATGTTGACCCCGCCCGGACCTCATCATCCTCATACTCAGCTCAGCATGGAGCTTCAGAAGAAGCAACAACAACAGCAGCAACAAATGTCATTACATTCGCCGCATCATCAGATGGCGCCGTCGCCTCTTCGAAGTCTTCATCCGCACATTTCACCGAGCGTGTACGAGATGGCTGCCCTCACGCAAGATCTCGACACACAAACGATCACCACGAAAATCAAAGAAGCGTTACTGGCCAATAATATCGGCCAGAAAATTTTCGGTGAAGCGGTTCTCGGTCTTTCGCAGGGTTCTGTCAGCGAGCTTCTGAGCAAACCGAAGCCGTGGCATATGCTTAGCATAAAAGGCCGTGAACCTTTTATCAGGATGCAGCTTTGGCTGTCAGACGCGCATAACGTCGATAGACTGCAAGCATTGAAAAACGAGCGACGAGAAGCAAACAAAAGACGACGCAGCAGTGGCCCGGGTCATGACAACAGTTCTGACACTTCAAGTAATGACACTGCTGAGTTTTATCACGCAGCGTCACCCGGTCCGGGACCCACTACCGGTAAGAAGCAACGTGTTCTCTTCTCTGAAGAACAAAAAGAAGCTCTTAGACTCGCTTTTGCCTTGGATCCGTATCCTAATGTAGCTACCATCGAATTCCTCGCCGGTGAACTCGCCCTATCCTCGAGAACAATAACGAACTGGTTTCACAATCATCGAATGAGACTGAAGCAGCAAACGCCACACGGTCAGCCGGAACCACAATCGCCACGAGAACCTGGCCAGCCTTTCGATCCTGTTCAATTCAGATTACTACTGAACCAAAGACTGTTAGAGATTCAAAAAGAGAGATTGGGATTAGGAAATGTACCTTTACCTTACTCTCCATACTTCAATCCCAATCTAGCGGCTCTAGTGGGTAATGCGTTGAAGGAGCAATGCTCCGGCCTCGATCTCTCAATGAACTCTCTGAAGAGAGAACCAAATCAGGAGTTCGAAGACGAAGATGTCGAGGACGCGATGAGTAATCTAGGTAGTGAAGATTCGGAAGGTTCGGCCAGCAGTATAAAGAGAGAACCCGCGGAAACGCCGACGGCACCCGCGACGGTTAGGTCTAACAGAAGAAAACCTGCAGCACCGCAATGGGTGAATCCAGAATGGCAAGAACCAGCAAGAACAGGCGACGAAGTCATTATCAATGGTGTTTGCGTGATGCAGACGGATGATTATGGTGTGAAGAGGGAAGCCGAGGAGACCATAAGAGTCGAACCGACACCCGTGCAGGACCGGTACGAAGAAGACGCTCAGAGTGACGTCTCTTCCGTGTCCGCCAACAATGGGGCCGATCGGGACAGTCCGCTTCCCAGTCCAAAGTCTGGTCAAAATAGCCCAGTGACGTCACTCAGACCGCCGTCGGCACAACAAACGCAACAATCCACGGAGGAGAGTCCGAAGGACGTGGTAAAGCAAGAACCGGAAGAAACGTGGGATTACTAG
- Protein Sequence
- MPEVNRRREKLINQLVEEVSRLQQNLQRLQEQSAQATVRLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKSSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAISLPPRSTPTPSSASSTTSNLLFPPPLQNVETFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGLHPPSTPSSLNHLPSPSADPSSTSNTPAKSNTPISTAPLSNLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETNTPSASINGGGLTPGVPSAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDGGPPEMNDERLAHILSESSHMQMRSEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRPREFSSAIFPHFFSGTQSGLQGIERTQEDIRLALDAYHRELQKLNAAPGQTPTMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGGSVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPSEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQQHQQENQMQLGPPQQSPQLPQHPQPPPPMMLTPPGPHHPHTQLSMELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNSLKREPNQEFEDEDVEDAMSNLGSEDSEGSASSIKREPAETPTAPATVRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSANNGADRDSPLPSPKSGQNSPVTSLRPPSAQQTQQSTEESPKDVVKQEPEETWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00729955;
- 90% Identity
- iTF_00014519;
- 80% Identity
- iTF_01271086;