Sinv008419.1
Basic Information
- Insect
- Solenopsis invicta
- Gene Symbol
- ct
- Assembly
- GCA_016802725.1
- Location
- NC:14268574-14423544[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6e-28 4.2e-24 84.0 0.0 2 72 538 609 537 614 0.95 2 3 7.8e-30 5.5e-26 90.1 0.0 3 77 947 1026 945 1028 0.89 3 3 5.8e-31 4.1e-27 93.7 0.0 3 75 1183 1256 1181 1260 0.95
Sequence Information
- Coding Sequence
- ATGCAGGCCTCCGCGGAGGCCAACTCGCGGAATATAACGACCATGGAATGGCTCTACAAGAAGGAGCCCTTGTTCACGCTCGCCCACTTCTGGCAACAGAGAGCGACTTCGGCGGAGAAAGAAATAGCCGCGCTAAAAGAACAGCTCGCCGCAACGAATGACAACAATTCCAAGACTGAGGGACACCAATTGTCTCAGCCTCCGCAGGGAAGCGATCAACAACAGGTACACGATGCCAGCAATCCCAGAAGGACGCCGAACAGCAACCTCGAGCAGGAGCTGCAGGCCAAAGACAAAGAGATCAACCAGTTGGTTGAGGAGGTGTCCAGGCTACAGCAGAGCCTGCAACGTCTTCAGGAGACAAGTGCGCAAGCAACGGCGCGGCTCGAGGAGGAGCTCGAAGTGCGCAGGCAGCACATCAACAGACTGGAGAGCAAATTGGAACGGCAGAGGGACTATGATGACCTGAAGCGCGAAATTAGTGTGCTGAGGTCAGTCGACCTTTCGCAGATACCAACTGGCGAACCTGGAAAGAGCTTGGAGCATCTTCTTATGGAGCGCTTCAAGGCGCTCCAACAAGCCGAGAACCTGAAACCCTCCAATACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTGCCACCTACGTCCCACGTGTCCTCCCAGCAACCACCGCCACCGCCTCCGACAGCAGCCTCCCTCCCTCCACGTTCCACCCCGACGCCCTCTTCGGCCACTTCGACGACTTCGAGCCTCCTCTTCCCGCCACCCCTCCAGAACGTCGAGACTTTCGGCTCGTTTCTCGGTGAAGAAATCGTTGCCAATTGGAGGCGGACATTGGAAAGGTCTATCATGAgccaacagcagcaacaacagcagcaacagcagcagcagcaacaacaacaacaacagcaacaatCACAGCCATCTCAATTAAGCCAGTTGACACAACAGCAACAACAATTGCAACAAGCCCAACCGCACATAGGGTTACACCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCACCGGGTGCGGATCCGTCGTCCACCTCGAATACCCCGGTGAAATCGAACACCCCGATCGGTACAACACCCCTGGGCAGTCTTGATGTCATTGAGAAAGCGCCAACGCCGGTATCGGGACATGAAACGCCGGCGCCTCCGACACCATCCTCCACAACCGCCTTGACATCGCCGCCGAGCTTCCAACCACCAACGTCGATGGTGGAAACTAGTACTCCTTCGGCTTCCATCAATGGCAGCGGTCTCACGCCCGTCGTACCGAGCGCACCGCCCCCGAAGAGTCCGCCCGATCAAGAATCTTGtcacaataataacaatagtcATCACCTTGCGAATAACAATATCGGCGGGCTGAGCGTCCTCGATACGCTGAAGAGTCCGTTTCGGTTTGACGATCGAGCGTATCCCTTCCGATTCGGTGACGAGTTCGGTGCTGCCGGTATGGCCGGTCGGCTGGGCGAGTCCCTCATTCCAAAGGGTGATCCTATGGAGGCGAGACTGCAGGAAATGTTGCGTCATAACATGGACAAGTACGCCTCGCAGAATCTTGACACTCTTCACATAGCCAGGCGGGTGCGCGAGCTGTTGTCGATACACAATATCGGTCAAAGACTATTCGCCAAATACGTTCTCGGATTAAGTCAAGGCACGGTCAGCGAGTTGCTTAGCAAGCCCAAGCCTTGGGACAAATTAACCGAGAAGGGCCGCGACAGTTATCGGAAGATGCACGGTTGGGCTTGCGACGAGAACGCCGTGTTGCTGCTCAAGTCCCTGATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAAGGAATGCCAGCGTTCGCACGTGGACCACAGGATGGTGGTCCGCAGGAAATGAGTGACGAAAGATTGGCGCATATTCTCTCGGAATCGGGCCATATGCAAATGAGAGGTGAGCACGAGGTGTCGAACGACGCTGACAGCAAGAGCCCGAGTAGACTCGGTTGCCCGAGTCCGTTCAACAAAGACAGACTGGACAGCCAAAATAGGAGACTGAAGAAGTACGAAAACGACGACATTCCCCAGGAGAAGGTGGTGAGGATTTACCAAGAAGAATTAGCCAAGCTGATGGGCACGAGAGTGGAGAATCTTCGTCCGCGAGAATTCCCTAGCGCGATCTTTCCACATTTTTTCAGTGGCACCCAGAGCGGTCTTCAAGGCATCGAGCGTACCCAGGAAGACATTCGAATGGCATTGGACGCTTATCACCGTGAGCTTCAAAAATTGAATGCCGCACCAGGTCAGAATCCGTCAATAGCGGGTTTACCAGGATTACCTGGATTACCGGGTTTGCTGGCGCTTCAACAACAGGCTCTTCAACAGCATCATTTGGCCGCGAATGGCGGCGGCGGTGTACAGGACTTGAGTTTAGGCAAAGTGGATCCGCGCAATAAAATGATAAACGGTGTGtcggaagaagagaaagagaagatggAAGAGGCGATGAGACACGCCGGAAGTGCATTCTCTTTGGTGAGGCCGAAGCAGGAATCGACGGGCCCGCAATCGACGCCCGGCGGTTCCAGCGCGAGTTCACCTCTCGGCAATTCCATACTTCCCCCCGCGATGACGCCGAATGAGGAGTTCTCCAGTGCGGCGGCAGCCAGTCCTCTTCAGAGAATGGCCTCCATCACGAACAGTCTGATTAGTCAACCGTCCACCCCAACTCACCACTCGGCCAACCAAAGACCGCTGAAAGCTGTGCTTCCTCCAATCACGCAGCAGCAGTTCGATCTGTACAATAATCTTAACACCGAAGATATTGTAAAGAGGGTAAAGCGCACTGTGAAGGAACAGCTGTCTCAGTATTCGATTTCGCAGCGGCTTTTCGGCGAATCGGTATTGGGTCTATCTCAGGGATCAGTGTCGGACCTCCTCGCGCGTCCAAAACCATGGCACATGCTGACTCAAAAGGGTCGCGAGCCCTTTATTCGGATGAAGATGTTCCTCGAAGATGACAACGCGGTGCACAAACTCGTCGCCAGCCAGTACAAGATCGCACCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGAACACCTATGAAACCTATGCCTCCAACGAAACTCGTCCAAGAACAGCTTCAGAACGCAGCGAAGGCGCAGGCCGCCGCTCAAGCGGCCGCGCAAGCAGCGGCGCAGCAGCATCAGCAGGAGAATCAGATGCAGCTCGGTCCGCCACAGCAAAGCCCTCAGCTTCCGCAGCATCCGCAACCGCCACCACCGATGATGTTAACTCCGCCCGGACCTCATCATCCTCACACTCAGCTAAGCATGCAAGAACTCCAAAAgaaacagcagcagcaacagcagcaacaaatGTCACTGCACTCGCCGCATCATCAGATGGCACCGTCGCCTCTTCGAAGTCTTCATCCGCACATTTCACCAAGCGTATACGAGATGGCCGCTCTTACGCAAGATCTCGACACACAGACAATCACAACGAAAATCAAGGAAGCTCTACTGGCTAACAACATCGGCCAGAAGATCTTCGGTGAAGCGGTTCTCGGTCTGTCGCAGGGCTCCGTCAGTGAGCTATTGAGCAAACCGAAACCGTGGCATATGCTCAGTATAAAAGGCCGAGAACCTTTTATTAGGATGCAACTTTGGCTATCAGACGCACATAATGTCGATCGACTGCAGGCGTTGAAGAACGAACGACGAGAAGCAAACAAGAGACGACGCAGCAGCGGTCCCGGTCACGATAACAGCTCCGATACTTCGAGTAACGACACAGCCGAGTTCTATCACGCGGCATCACCCGGTCCGGGACCCACCACCGGGAAGAAGCAGCGCGTACTTTTCTCGGAAGAGCAGAAGGAAGCCCTCAGACTCGCCTTCGCCTTGGATCCATATCCCAATGTAGCCACCATTGAATTCCTCGCCAGTGAACTCGCTCTGTCTTCGAGGACGATAACGAATTGGTTTCATAATCATCGGATGAGACTGAAGCAACAGACGCCGCACGGGCAACCGGAGCCTCAGTCGCCGCGAGAACCCGGCCAACCGTTCGACCCTGTTCAATTCAGATTGCTATTGAACCAAAGACTGCTGGAGATTCAAAAGGAGAGATTGGGTCTAGGAAATGTACCTCTACCTTACTCTCCGTACTTTAATCCCAATTTGGCGGCTCTGGTAGGTAACGCATTAAAAGAACAATGTTCTGGTCTTGACCTCTCGATGAATGCCCTGAAGAGAGAGCCGAATCAAGAGTTCGAGGATGAGGACGCCGACGACGCGATGAGTAATCTAGGTAGCGAGGACTCGGAAGGTTCGGCCGGTAGTATAAAGAGAGAACCCACAGAAACGCCGACGGCACCCACGACGGTTAGGTCCAACAGAAGAAAACCCGCGGCACCACAATGGGTGAATCCAGAATGGCAAGAACCAACGAGAACGGGCGACGAAGTCATCATCAATGGCGTCTGCGTGATGCAGACGGACGATTACGGAGTAAAGAGAGAAGCTGAGGAGACCGTAAGAGTCGAGCCGACACCGGTGCAGGACCGATATGAAGAGGATGCCCAGAGCGATGTCTCTTCCGTATCCGGCAACAATGGTGCCGATCGGGATAGCCCGCTTCCCAGTCCAAAGTCTGGTCAGAACAGTCCAGCGACGTCGCTCAGACCGCCGTCGGCGCAACAAATGCAACAGTCCACGGAGGAAAGTCCGAAGGACGTGGTGAAACACGAACCGGAGGAAACGTGGGATTACTAG
- Protein Sequence
- MQASAEANSRNITTMEWLYKKEPLFTLAHFWQQRATSAEKEIAALKEQLAATNDNNSKTEGHQLSQPPQGSDQQQVHDASNPRRTPNSNLEQELQAKDKEINQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAASLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMSQQQQQQQQQQQQQQQQQQQQSQPSQLSQLTQQQQQLQQAQPHIGLHPPTTPSSLNHLPSPGADPSSTSNTPVKSNTPIGTTPLGSLDVIEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETSTPSASINGSGLTPVVPSAPPPKSPPDQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRAYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGMPAFARGPQDGGPQEMSDERLAHILSESGHMQMRGEHEVSNDADSKSPSRLGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGTRVENLRPREFPSAIFPHFFSGTQSGLQGIERTQEDIRMALDAYHRELQKLNAAPGQNPSIAGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKRTVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQQHQQENQMQLGPPQQSPQLPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDADDAMSNLGSEDSEGSAGSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPATSLRPPSAQQMQQSTEESPKDVVKHEPEETWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00729955;
- 90% Identity
- iTF_00014519;
- 80% Identity
- iTF_01355206;