Aeph013686.1
Basic Information
- Insect
- Acentria ephemerella
- Gene Symbol
- -
- Assembly
- GCA_943193655.1
- Location
- CALPDL010000093.1:2069247-2074846[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.033 2.3 9.1 0.6 1 23 79 102 79 102 0.95 2 33 3.8e-05 0.0026 18.4 2.7 1 23 107 130 107 130 0.96 3 33 0.0042 0.29 12.0 1.7 1 23 134 157 134 157 0.96 4 33 0.11 7.4 7.5 1.0 2 23 160 182 160 182 0.96 5 33 1.8 1.3e+02 3.6 0.1 2 13 191 202 190 204 0.89 6 33 0.59 40 5.2 0.6 1 23 239 261 239 261 0.96 7 33 5.7e-06 0.00039 21.0 4.5 1 23 359 381 359 382 0.96 8 33 0.0011 0.079 13.7 1.5 1 23 386 409 386 409 0.95 9 33 0.38 26 5.8 0.5 2 23 412 434 411 434 0.94 10 33 0.45 31 5.6 0.3 2 19 441 458 440 461 0.93 11 33 0.0037 0.26 12.1 1.4 1 23 515 538 515 538 0.94 12 33 0.0024 0.16 12.7 0.5 1 23 611 634 611 634 0.97 13 33 0.00044 0.03 15.0 0.2 3 23 641 662 640 662 0.93 14 33 0.00033 0.022 15.4 2.2 1 23 667 690 667 690 0.92 15 33 0.00017 0.011 16.4 0.6 2 23 696 718 696 718 0.95 16 33 3.5e-05 0.0024 18.5 4.4 1 23 722 745 722 745 0.97 17 33 0.19 13 6.7 1.5 2 23 752 773 751 773 0.96 18 33 0.027 1.8 9.4 1.2 1 23 812 834 812 834 0.95 19 33 0.39 27 5.8 0.1 2 23 862 884 861 884 0.89 20 33 0.0085 0.58 11.0 0.4 2 23 905 927 904 927 0.95 21 33 0.0033 0.23 12.3 2.0 1 21 932 952 932 955 0.94 22 33 0.00043 0.029 15.1 2.3 1 23 960 983 960 983 0.97 23 33 0.00085 0.058 14.1 0.6 2 23 986 1008 986 1008 0.95 24 33 0.17 12 6.9 2.6 2 20 1015 1033 1014 1035 0.92 25 33 0.0067 0.46 11.3 1.5 1 23 1091 1114 1091 1114 0.90 26 33 0.12 8.6 7.3 0.1 2 23 1142 1164 1141 1164 0.93 27 33 1.3 86 4.2 0.1 2 23 1187 1210 1186 1210 0.93 28 33 4e-05 0.0027 18.3 0.2 3 23 1217 1238 1216 1238 0.95 29 33 0.02 1.4 9.8 5.7 2 23 1243 1265 1242 1265 0.94 30 33 0.00062 0.042 14.6 3.3 1 23 1270 1293 1270 1293 0.97 31 33 3.8e-05 0.0026 18.4 4.2 1 23 1297 1320 1297 1320 0.97 32 33 0.00059 0.04 14.6 0.6 2 23 1327 1348 1326 1348 0.96 33 33 8.7e-06 0.00059 20.4 1.7 1 23 1354 1376 1354 1376 0.98
Sequence Information
- Coding Sequence
- ATGAAGCGACACACTAAATCACACAGCGCGTGTTTGAACGACGACCGTTGTCTGAAACACATTAAAGGTCAGGATACTGAAGTTAAACTTGATGTCTCTGATGGCATATCCTGTTTACTGTGCCATAAACATCATGAAATCCTTGATGATATCATCATGCATTTTATAGAAAAGCATAGCTTACCATACAACAAGAAATTACAAATCAAAATGGTCTTGTATAGATTGGTCGATTTTAAATGCTTGGAATGCAATACGACTTTTGAGATTTTTTCCAGACTTGTAAAACATGTGAATCAAGCCCATTCGGTGAACTGCTTCGTATGCCACGACTGCGGGCAAAGTTTTGGCAAAAAAAGAGATCTCCGAAGCCATTTAAATTATTATCACAAACACGTGTACAAATGTAAACCATGCAATCTAACATTTACAACTAAAGACGCATACCTTAAACATAAATCTCGACCGCACTTTGCAGTCTGTAATATCTGTTTCGAGAAGTTTCCTTCAGCAACGAAAAGGCTCGCGCACATGCATCGGGAACATTTTACCGATAACATTAAACAATTGACATGCGGTGTTTGCAATAAAATATTCGATACAAAGTTAGATGAAAATGGGGCAAAAGGTCATCATGCTAGTAGAAAACGGAGGAGAAATCTGCAAATTTTGTTCAACAACACCTCAATGATACCGTTTAAATGGCGCGGGAAATTTATGTGCTTTTACTGCGGCGACGACATTGACGATTATATGGAGCTCAGGAAGCACACCAAATCGCATGGCGTTTGCTCAGAGAGAGATAGAGCTATAAAGTTAGTTAAGTCTCGGGATTCCGAAGTAAAGATCGATGTATCAGATATTACATGCGAACTTTGCAATGAATTGTTTACTTGTTTCGATGATATTGTTATTCATTTGACTTTGAAACATCAGTTACCTTACGATAAAGATGCAGATATAACAATTACCACTTATAGACTGCTAGACCTCAAGTGCGTATTTTGTGCGGATAGCTGTGATAACTTTAGCAGACTCGTAAAACATATGAACCACGTACACCCTATAAATTGCTTTGTCTGTCATGATTGTGATAGGAAATTCAACAAAAAGCGAGATCTCGAATCTCATATTCGTATTCATCATAGGAAGGTGTATAATTGTAAAAAGTGTTCACTGCATTTTCCTAATAATGCGGCTTTACAGAAACACAAGGCACGTGCTCACATTTCAATGTGCAACATATGTTTTGAGCCTTTTCCCTCTGATAGTAAGAAATTGGATCACATGAAACAAACACATCTTGGTAAGGACGTACTAGAATGCGGCTTTTGTCATAAAAAACTTAGCACGAAGTTAGCTCTTTTGAATCACGCCGGCAAATGTATTGTTCAACAGTATAAGAACGACATAGCCATGTACGATGGTGAACCCGAAGCTGATAATAGCGACAGAAAGCCTACTGTAGCTGAAATAAGAAGCAATATCGCTTGCATTGTCAATATGTCGACCGCTTTACCTTTCAAATATTTTATGAACAAATTCCGCTGTTTCTACTGCCCAAAAGATTTCATAGAATGCGATGACCTTAAAGAACATACTGTAATGGAACACCCATCTTGTAATAGTAAATTAAAATGTCTTAGGCTTAGAAATAGGGAGCATGGTATCAAAATTAAAATAGACATATCATATCTCTCCTGTAAGATGTGTTTTGAACCCATGCAAGATTTGGATGCCTTGATAAACCATTTGATCGCTGAACACAAAGCTCAGTACGATAAGTCTGTAGATAATAATATGCAACCTTTCAAGTTGATAAGGGATAATTTCGCGTGTCCGTTCTGTGTTGAAGTTTATAGGTATTTCAGTACTCTACTAAAACATATAAGTACAAGTCACACGGAAAATAGAAACATTTGTTCGTATTGCGGTATGTCTTTCAGAACGGATCCCAGTTTAAGAGCACATATAACACTGCGACATAAGCCAAACGGTCACAAATGTAACGTATGTGAGAAAGATTTTACTACTAGACACGCGTTACGAGATCACTTGGGCAATGCACACGGTAATAAAGTAGCCAAATGCCAAGTCTGCTCGGAAAGGTTCACCTCTCAATACGCGATGCAACGGCATATGATTAACGTGCACGCCACAGGCCacaagtgctcttactgcggcaaaatgttcacaaagaactcctttatggtgaatcacatacggcgaacacatctaaaggagaagaacgtacaatgttctgtatgtttcgaaagattctttgacgtacacctcttgagaatgcacacagtaaagcatgttgATGAAATCGCTCTGGCGCCTTACGAAGGATGCGCCTCTGAGCGCAGAAGGAAAAACTTGAAAATACTATTCAACAATACAACAGTGTTGCCATTCAAATGGCGTGGCAGATATCTTTGTTTTTATTGTCCTAAAATCTGTGCCGAATACGTGGAATTGAAAAAACATACAATTTCACACGGCTGGTGTACCACAAAAGATTATTCCTTACGAGTAATAAAAGGAAACCATATAGAGATAAAGGTTGATGTGTCTGAAATATCTTGCGAGATTTGCAACGAGCCGTTTCATGATCTGAACGAGATTATAGACCATCTGATCGGGAAACACAATTTGGAATACGATAAGACTGTTGATATACCATTTCAAACTTACAGGTTAATGAATTTAAGCTGTTTATTCTGTGATGAGAAGTTTACTTATTTCGGTTACTTGATCAACCATGTGAATATGTCTCACCCACAGAACTGCTTTATTTGTGACGATTGTGGAGTTACTTTCAACAAGAAGAGGGACCTGGCCGTTCACTTTAGATGTTACCACAAACACGGTGGTTACCCGTGCGATCAATGCGTTAAACATTTTGATAATTTCTATTTACTACGCAGGCACCAAAACAGTGTGCATTTTAGGAAGTGCAAAAATTGTAATTTGCGTTTTGTGTCCCTGGGATTGTTGCAAAAACACATATCTTTAGAGCATCCGGAAGATGGCAGTTTAAAATGCGAGTACTGCGCCAAACAATGTCGTTCTTCGCAAGGTTTGAAACAGCATAAAAGCAAATGCAGGGTCAAGTTCATCGTTACTGCAGACGAACCGACAGACAATCACTTTCCAATTGATAATGACTCTGAACCTAAAAAAAAGCAAAACGTTAAACAAATCAGACAAAATATTCAATGCGTCCTAAACATGTCCACTGCTGTCCCTTTCAAATTCTTTTCAAAGTTTTCCTGCTTTTATTGTTCGAAAAAATTCGTTGAATTCGATGATCTCAAGAACCATACAGTTTTGGAACATCCCGTGTGCGATTTGAAATCAAAATCCATGCGAAAATGCAAAGGGGAAAGAATTTCCGTCAAAATCGACACAACCTCTTTAACTTGTAAAGGTTGCTCTAAAAATATGGACTCATTAGATAACTTAATAGACCACTTAATTTTAGAACATAAAGCTGATTACGATAAAACCATTTTAGGCTGTTTGGAACCATTTAAAATAGTTAAGGACAATATACCTTGCCCTCAATGCCCGGATCGTGCATTCCGATACTTCGGCATACTTCTCCGTCACATGAATTCTGAACACAGCAACAATAATAGGATCTGCGATTTCTGCGGTCGCAGTTTCAAGAACGTCGCCAACTTAAACGTTCACATCAACTACACGCACATCGGCTCATGCGAATGTAATATTTGTGGAGTCAAATACAAAAACCAGTGGTGTCTAGCGAGACACAGAGCGAAATGCCACAACGCCAAAGATTACAAATGCCCTAAATGCCCTGAAAAGTTCCAATCTCAATACCATAAGCAAAAACATTTAATAAAAGTGCATAACACAGGACATAAGTGTGAGCAGTGCGGAAAAATGTTCACACGCAACTCTTTTATGAAAGATCACGTAAGACGGACGCATTTGAAGGAAAAAAACGTTTCATGTTCTGTTTGCAACGAAAAGTTCTTTGATAATTACCTGCTGAGGATGCATATGGTAAAACATGAAGGGGAAAGGCGGTTCAGCTGCAATATTTGCGGGAAAGCTTTTCTGAGACGGAGCAATCTGCATTCACATATGGAGATGCACAAGAAATATGGGCACGCAGTTGGTTTGCTACACAACATGATAAATTAA
- Protein Sequence
- MKRHTKSHSACLNDDRCLKHIKGQDTEVKLDVSDGISCLLCHKHHEILDDIIMHFIEKHSLPYNKKLQIKMVLYRLVDFKCLECNTTFEIFSRLVKHVNQAHSVNCFVCHDCGQSFGKKRDLRSHLNYYHKHVYKCKPCNLTFTTKDAYLKHKSRPHFAVCNICFEKFPSATKRLAHMHREHFTDNIKQLTCGVCNKIFDTKLDENGAKGHHASRKRRRNLQILFNNTSMIPFKWRGKFMCFYCGDDIDDYMELRKHTKSHGVCSERDRAIKLVKSRDSEVKIDVSDITCELCNELFTCFDDIVIHLTLKHQLPYDKDADITITTYRLLDLKCVFCADSCDNFSRLVKHMNHVHPINCFVCHDCDRKFNKKRDLESHIRIHHRKVYNCKKCSLHFPNNAALQKHKARAHISMCNICFEPFPSDSKKLDHMKQTHLGKDVLECGFCHKKLSTKLALLNHAGKCIVQQYKNDIAMYDGEPEADNSDRKPTVAEIRSNIACIVNMSTALPFKYFMNKFRCFYCPKDFIECDDLKEHTVMEHPSCNSKLKCLRLRNREHGIKIKIDISYLSCKMCFEPMQDLDALINHLIAEHKAQYDKSVDNNMQPFKLIRDNFACPFCVEVYRYFSTLLKHISTSHTENRNICSYCGMSFRTDPSLRAHITLRHKPNGHKCNVCEKDFTTRHALRDHLGNAHGNKVAKCQVCSERFTSQYAMQRHMINVHATGHKCSYCGKMFTKNSFMVNHIRRTHLKEKNVQCSVCFERFFDVHLLRMHTVKHVDEIALAPYEGCASERRRKNLKILFNNTTVLPFKWRGRYLCFYCPKICAEYVELKKHTISHGWCTTKDYSLRVIKGNHIEIKVDVSEISCEICNEPFHDLNEIIDHLIGKHNLEYDKTVDIPFQTYRLMNLSCLFCDEKFTYFGYLINHVNMSHPQNCFICDDCGVTFNKKRDLAVHFRCYHKHGGYPCDQCVKHFDNFYLLRRHQNSVHFRKCKNCNLRFVSLGLLQKHISLEHPEDGSLKCEYCAKQCRSSQGLKQHKSKCRVKFIVTADEPTDNHFPIDNDSEPKKKQNVKQIRQNIQCVLNMSTAVPFKFFSKFSCFYCSKKFVEFDDLKNHTVLEHPVCDLKSKSMRKCKGERISVKIDTTSLTCKGCSKNMDSLDNLIDHLILEHKADYDKTILGCLEPFKIVKDNIPCPQCPDRAFRYFGILLRHMNSEHSNNNRICDFCGRSFKNVANLNVHINYTHIGSCECNICGVKYKNQWCLARHRAKCHNAKDYKCPKCPEKFQSQYHKQKHLIKVHNTGHKCEQCGKMFTRNSFMKDHVRRTHLKEKNVSCSVCNEKFFDNYLLRMHMVKHEGERRFSCNICGKAFLRRSNLHSHMEMHKKYGHAVGLLHNMIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01081794; iTF_00279317; iTF_00448337;
- 90% Identity
- -
- 80% Identity
- -