Zfil020488.1
Basic Information
- Insect
- Zygaena filipendulae
- Gene Symbol
- -
- Assembly
- GCA_907165275.1
- Location
- OU015672.1:3005478-3006196[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-07 0.00013 22.2 0.0 3 39 17 53 15 57 0.82
Sequence Information
- Coding Sequence
- ATGCCGAAAGTACGCGTCAGGACAACTGAAAAGGCTTCCTGGTCTTCTGATAGCCTAAATAAAGCTATGCAGCTCATTGATGGCGGTTCTTCTATAAGAAATGCTGCTAAAGTAATGGGAATCCCTTTTTCAAGCCTTCAGAAGAGGATAAAAAAAGGTTCTACCTTAGCACCACATCTAGGACGATTCACTGTCTTTAGTCGTGAGGAAGAAGCCGAGCTAGCGAACTTGGTGAAGAAAATGGCAAATATTTTCTATGGTTGCACTGCTAATCAAATCAGAAAAGTCGCTTTCGAATATGCTGAAAAATTAAATGTGAAGCACAATTTTAATCAAGCTTCAAAAATGGCTGGACGCGATTGGTTGCATGCTTTTATGGCAAGAAATAACATTTCTATTAGAAAACCGGAAGCGACCAGCATAAATAGAATCACGGCCTTTAATAAAACAGAGTTGGGAGAGAGGAAAAAACATCACCTTGTTGTGTGCTATGAGCAGTGCTGGGGGGTACATTCCACCTATGTTTATCTTCCCAAGAAAAAGAATGACTCCACTACTTGA
- Protein Sequence
- MPKVRVRTTEKASWSSDSLNKAMQLIDGGSSIRNAAKVMGIPFSSLQKRIKKGSTLAPHLGRFTVFSREEEAELANLVKKMANIFYGCTANQIRKVAFEYAEKLNVKHNFNQASKMAGRDWLHAFMARNNISIRKPEATSINRITAFNKTELGERKKHHLVVCYEQCWGVHSTYVYLPKKKNDSTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00281153; iTF_00933668; iTF_00111589; iTF_00416253; iTF_00125076; iTF_00383596; iTF_00843470; iTF_00842593;
- 90% Identity
- -
- 80% Identity
- -