Kina016532.1
Basic Information
- Insect
- Kallima inachus
- Gene Symbol
- -
- Assembly
- None
- Location
- HiC:5704512-5705108[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-07 4.4e-05 23.5 0.0 3 39 17 53 15 55 0.90
Sequence Information
- Coding Sequence
- ATGCCGAAAGTACGAGTCAGGACAACTGAAAAGGCTTCCTGGTCTTCTGATAGCCTGGATAAAGCTATACAGCTTGTTGATGCCGGTTCTTCTATAAGAAATGCTGCGAAAGTAACTGGAATTCCATTTTCCAGTCTTCAGAAAAGGATAAAAAAAGGTTCTATCTTAGGGCCACATCTAGGACGATTCACTGTTTTTAGTCCTGAAGCAGAAGCCGAGCTAGCGAACTTGGTGAAGAAAATGGCAAACATTTTCTATGGTTGCACTGCTAATGAAATTAGAAAAGTCGCTTTCGAATATGCTGCAAAATTAAATTTGAAGCACAATTTTAATCAAACTTCCAAAATGGCTGGACGCGACTGGTTGCGTGCTTTTATGACTAGAAATAACATTTCTATTAGAAAACCGGAGGCGACCAGCATAAATAGAATCACGGCCTTTAATAAAACAGAGGTAAATCTGTTCTTTGAGCTACTTGGGCAGCTAATGGGAAAGTACAGATTCGTTGCAAAAATATTTATAATTGCGATGAAACCGGTATTTCAACGGTTCAAACTCCGGGAAAAATTTTGGCTGCAAAAGGACAGAAAAGAGTAG
- Protein Sequence
- MPKVRVRTTEKASWSSDSLDKAIQLVDAGSSIRNAAKVTGIPFSSLQKRIKKGSILGPHLGRFTVFSPEAEAELANLVKKMANIFYGCTANEIRKVAFEYAAKLNLKHNFNQTSKMAGRDWLRAFMTRNNISIRKPEATSINRITAFNKTEVNLFFELLGQLMGKYRFVAKIFIIAMKPVFQRFKLREKFWLQKDRKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01569272;
- 90% Identity
- iTF_01119273; iTF_01119270; iTF_00125076; iTF_00888215;
- 80% Identity
- -