Basic Information

Insect: Zootermopsis nevadensis
Gene Symbol: ZNF236
Assembly: GCA_000696155.1
Location: NW:638902-664707[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.034 1.2 9.1 9.1 1 21 245 265 245 267 0.94

2 28 0.021 0.75 9.8 0.4 1 23 273 295 273 295 0.95

3 28 3e-05 0.0011 18.7 0.3 2 23 301 322 301 322 0.97

4 28 0.11 3.8 7.6 0.3 3 23 330 350 328 350 0.96

5 28 9.3e-05 0.0033 17.2 0.9 2 23 361 382 361 382 0.97

6 28 0.00077 0.028 14.3 8.6 1 23 405 427 405 427 0.98

7 28 1.1e-06 4.1e-05 23.2 0.6 1 23 433 455 433 455 0.99

8 28 0.00088 0.032 14.1 0.4 1 23 461 484 461 484 0.95

9 28 0.00015 0.0054 16.5 1.4 1 23 494 517 494 517 0.97

10 28 0.026 0.92 9.5 0.1 8 23 641 656 640 656 0.95

11 28 2.3e-06 8.3e-05 22.2 3.3 1 23 662 684 662 684 0.99

12 28 1.2e-05 0.00041 20.0 2.3 1 23 690 712 690 712 0.97

13 28 0.0004 0.015 15.2 3.3 1 23 718 740 718 740 0.97

14 28 3.4e-06 0.00012 21.7 1.5 1 23 806 828 806 828 0.99

15 28 6.9e-06 0.00025 20.7 1.0 1 23 834 856 834 856 0.99

16 28 1.2e-06 4.3e-05 23.1 3.6 1 23 862 884 862 884 0.99

17 28 0.00013 0.0045 16.8 8.2 1 23 890 912 890 912 0.98

18 28 8.5e-05 0.0031 17.3 5.2 1 23 1250 1272 1250 1272 0.99

19 28 9.5e-05 0.0034 17.1 2.1 2 23 1278 1299 1277 1299 0.97

20 28 7.9e-06 0.00028 20.5 1.2 1 23 1305 1327 1305 1327 0.97

21 28 0.00011 0.004 16.9 1.3 2 23 1334 1355 1333 1355 0.97

22 28 1.3e-07 4.8e-06 26.1 0.7 2 23 1437 1458 1436 1458 0.98

23 28 0.015 0.53 10.3 6.3 1 23 1464 1486 1464 1486 0.97

24 28 3.7e-05 0.0013 18.4 3.1 1 23 1492 1514 1492 1514 0.97

25 28 0.00031 0.011 15.5 2.3 1 23 1520 1542 1520 1542 0.98

26 28 1.1e-05 0.0004 20.1 3.3 1 23 1806 1828 1806 1828 0.96

27 28 6.6e-06 0.00024 20.8 1.0 1 23 1834 1856 1834 1856 0.98

28 28 7.2e-08 2.6e-06 27.0 2.7 1 23 1862 1885 1862 1885 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.034	1.2	9.1	9.1	1	21	245	265	245	267	0.94
2	28	0.021	0.75	9.8	0.4	1	23	273	295	273	295	0.95
3	28	3e-05	0.0011	18.7	0.3	2	23	301	322	301	322	0.97
4	28	0.11	3.8	7.6	0.3	3	23	330	350	328	350	0.96
5	28	9.3e-05	0.0033	17.2	0.9	2	23	361	382	361	382	0.97
6	28	0.00077	0.028	14.3	8.6	1	23	405	427	405	427	0.98
7	28	1.1e-06	4.1e-05	23.2	0.6	1	23	433	455	433	455	0.99
8	28	0.00088	0.032	14.1	0.4	1	23	461	484	461	484	0.95
9	28	0.00015	0.0054	16.5	1.4	1	23	494	517	494	517	0.97
10	28	0.026	0.92	9.5	0.1	8	23	641	656	640	656	0.95
11	28	2.3e-06	8.3e-05	22.2	3.3	1	23	662	684	662	684	0.99
12	28	1.2e-05	0.00041	20.0	2.3	1	23	690	712	690	712	0.97
13	28	0.0004	0.015	15.2	3.3	1	23	718	740	718	740	0.97
14	28	3.4e-06	0.00012	21.7	1.5	1	23	806	828	806	828	0.99
15	28	6.9e-06	0.00025	20.7	1.0	1	23	834	856	834	856	0.99
16	28	1.2e-06	4.3e-05	23.1	3.6	1	23	862	884	862	884	0.99
17	28	0.00013	0.0045	16.8	8.2	1	23	890	912	890	912	0.98
18	28	8.5e-05	0.0031	17.3	5.2	1	23	1250	1272	1250	1272	0.99
19	28	9.5e-05	0.0034	17.1	2.1	2	23	1278	1299	1277	1299	0.97
20	28	7.9e-06	0.00028	20.5	1.2	1	23	1305	1327	1305	1327	0.97
21	28	0.00011	0.004	16.9	1.3	2	23	1334	1355	1333	1355	0.97
22	28	1.3e-07	4.8e-06	26.1	0.7	2	23	1437	1458	1436	1458	0.98
23	28	0.015	0.53	10.3	6.3	1	23	1464	1486	1464	1486	0.97
24	28	3.7e-05	0.0013	18.4	3.1	1	23	1492	1514	1492	1514	0.97
25	28	0.00031	0.011	15.5	2.3	1	23	1520	1542	1520	1542	0.98
26	28	1.1e-05	0.0004	20.1	3.3	1	23	1806	1828	1806	1828	0.96
27	28	6.6e-06	0.00024	20.8	1.0	1	23	1834	1856	1834	1856	0.98
28	28	7.2e-08	2.6e-06	27.0	2.7	1	23	1862	1885	1862	1885	0.97

Sequence Information

Coding Sequence: ATGGAGCCGTATTATAGCAACTGCTCATTTTTACTCAGTTTTATAGAACTTTTGATGATTTGCACTATAaACATGGATGAGGCTAAAAGTGGAAAGGATGATATGTCAGATGCACATGTTGTCTCTCTTGCCACTGAAACCGCCCTTAATAACTCAGGACTTGTGTTTTCTGATGGTAGCAACATGCTTGCTTCTGCAGATGTAGCATTGGATGATGGTGGAACAACATATTTGACTCTTCCGCTGCATTTTGTACAAGATGGTTCAGTACTTGAGTCAGGATCTAGCATTCATAACTTAATTCTTAAAAGCTTGGCAAGCAGCACAGTGTTTCTCGATACTAGTCAGTTTACCCTTCTGTCAGGGTGTTCTAGTCAAGTAATATTAAGTACGGATGGCcttgttgaagatggagatgggAAGATTCTGCTGGGTACAGAGAATGAAAAGAGTTCAGATAAAGTTTCAATTGTACCAGGCCTAGGAGTTGATATTGCAACCATTGACCTGACAAACCTTACTAGTGAAGGAGGAAGTGGAGATGTAGGTTCTGATCCAATCGAGAATGGAGAAGTTATCAAGCCTGGGTGTCTCACGTTCAGTTTGGATACAACTATTCATCCtccaaataaacaaaatcatgAGGTACATCAGCCCAATTCATCAAGAAGAGGACCAGGACGGCCTAGGAGGGAAGACACAGAAGTAGATCCTCCCATTGGAAAGGGGCCATTTAAGTGTCACATATGTGGTAAAGAATTTTCTAAGTCATCACAATGCAAGAGACATGTGAAATGCCATTCAGATGATAAGCCATTTTTGTGCAACCTatgttcatcatcatttaatGTGGAGTCAAATTTGATTCTGCACAAGGCAACACATAATGTAGATGACCCACGGTGTCCAGAATGTAATAAGAAGTTCTCCCGCATTGCAAGTTTAAAGGCACATGTGATGCTACATGAGAAAGAGGAAAGCCTGTTCTGCTCTGAGTGTGGTGATGAGTTCAGCACAATGCTCCAACTTGAGGAACATAAAAGGGAGCACCAAAATGAATGGGTTAAGCCATCTAATCCACAGTGTCGACAGTGCAAATGGCAATTCTCTCGTGCTTCAGCACTGCGTGAACATATGAAGGAACATTACAaggtaaaaGCTTCATTGTCACATAAGAGTCACAAACGTAACATAGATCGAAGCACTTTTATCCATAAATGTGACACGTGTCACAAGTGCTTCCAGAAACCGAGCCAGTTGGTCCGACATAAGAGGATCCACACGGGTGAGAGGCCCTATAAGTGCCAGATATGCCCAAGAGCTTTCAACCAGAAAGGCTCTCTACAAATTCATATGTCCAAACACAATGGTATTAAACCATTTCATTGTGAATTTTGTGCTGCTGCTTTCAGTCAGAAGGGTAATCTCCGTGCTCACATTGTACGAGTTCATACGATTCCCAACTCAGGAGAACAAGTTTATAAATGCATGGAATGTCcatgtgtgtttaaaaaattgggAAGCCTTAATGCACATATGAGTCGAATGCATTGTGGTGATGGTTCACAGAAGATTGAAGGGCCAGATAATTCTGATACATCACTCATAGTGAATGTTCGAGCCGTGTTGTCACAATTGGCAGAACTGGAAGCACATGTAGCAGGAGATAAAAACAAGATACCTGAGCAGCCTAGTGATTCAGATATTTTGCAGCAAGCCCTGGTTAATAGTGGCCTCTCTGGGAAGGATCAGTCTACCCTGCGAGGACTAGAAGATAGTTCTTGCAATCATGAAACCAAAATGAAGGATGGTGTCTGTGATGAGAGTGGAACAGTCAGACAGCACAAGGAGAGTAGCACAACCAGTTACATCACACTTGCTGACAGAGGACTTGATGGAACTGTGAGGAGATATATCACTAAAGAATTCAAGAAACCCTCAGATCTAGTTAGGCATATCAGAATACACACACATGAACGTCCATACAAGTGCACTCATTGCTATCGGTCATTTGCTGTCAAGTCCACGCTTACAGCCCACATACGCACGCACACTGGCGTCAGAGACCACGTATGCTACATATGCCTCAAGAAATTCTCTTCATCAAGTAGTCTTAAAGTTCACATAAGAATGCATACAGGTACCAAACCATTTGCCTGTCAGCTCTGTGACAAGACATTCCGAACCACAGGACACCAAAAGACTCACATGTTGTCTCATACCAAAGAAAGTAGTGGAACTTCTGGAGAAAGAGTTACAAAGCGGAAACTGGTCAGACAGAAGCCTACACTTCCTGTCTTACCAGAAGTTGCATTGCAAGAACCAATTATTATCACAAATAATGGATTTGTACAAGCTGTAGCCCGAAACAGCACTGTTTTCCTTCCTGGCAACACTGTGAGTTTGGATCGTCCATATGTGTGTAATGTGTGCAACGCAGCATTCCGTAAATTAAGTCACCTCAAACAGCACATTCGCATGCACACTGGTGAACGCCCATTCAAGTGTACCCTATGTGACAGGCGCTTCATATCAAATGGGGTACTGAAAGCTCATCAGCGAACACACGAGGGAGTAAAATCGTACAAGTGTCATCAATGTGGTAATATGTTCTCTACAAATGGAAGCTTGAAACGGCACATGAGTACACATAGCGACTTGAGGCCCTTCATGTGTCCATACTGCcacaaaacattcaaaacatCTGTTAACTGCCGCAAACACATGAAGACACACAAACATGAATTAGCTTTACAGGTTGCACAACAAACAGCTAAAGAAGGAGAAAGAACAAATACACTTAGCAGTATACCAGTGGATGGACAGGGTCCTGCTGTTGTGACAGAAAGTACAAACTTCCCTCCTGAAGGTTTAGGTCCAGACTTTACTCAAGCATTTTCAGATCAACCGTTTCAAGTAACATCAACCACTGAGCATCAGGAGCAAGAGGAAGTAACATTTGCTCAGAACACACTTGTTCATACACTTGCTCCTGATTCTCTGGTGGATGATGCTGAACCTGTAAACACTCCCAGTGTGATAACACACACATTGCATGCTGATGCCACAGGGACCATCACATTACCAAATCTTGATGGGCAACATACCTTGACACAGGAAAATATCCAGGAAATTGAGCGTACACTGAATGAACAAATTTTTGGTCCATCTACAAATGTAACATCGGATCTTGTGAATGTTGGGGAAGCATCCAGTGATCTGGCCACAAGAATCGAAGTTGGAGGTAGTGACAGTGAAGCTGAGTCAACCACAACAGAAGATTTAGCACATACTCTTGGAGCCACTGCTTCCCCATCAGGTCATCCTGATGCTTCAGCACTAGGCACTTTGTCAGAGCAACCTAAGGTTGATGGCAGAAACAAGAGTTCGGCAGAACCACCCAGCAATGGCAGTGTGTTTGGCAACACTTTCGATTCAGCAGGTTTTGAGTCATGTGTCTTCACAGCAATGACTCTTCAGAGTGATCCCCTGGAACTAGAAGGCCTAGGGTCAGGCCCTGCCATAACCACCAACATGGCTAGCATTCTCCCCCCACCTGAGGGTGCAATGCCTGAACCTGAAACTGCTGCAGCATCTGACTCTACTTCTAAGCCCGAACTCTTAGCAGAGCTACCGATGGAAGGTCCAGTTGCTGCTGCTGCAGTGGCAGCAGACGAAGCAGATAAAGATAAGAATTACATTCCAGGAAGACCTTTCAGTGCAGACAATCCCCCTGGTGAACGGCCTTACAAATGCAAACAATGCAGCCGTGCATTTAAGAAGTCATATCATCTGAAAGAACATGCAAGAAGCCATGTAGGAAAGAATTTAAGCTGTACTTTATGTGGAAGAAAGTGTACTACCTTTGGTGCTCTCAGGGCTCATATGAAAACACATGATGGCAGTAGAGATTATGAATGTGACCTATGTGGTTGTCAATTCACAACAAATGGTTCACTGAAACGTCACATGGTTGTCCACAGTGATGAAAGGCCACTAAAGTGTTCTATCTGCGATGCAGTGTTTCGGACTGACCATCTGTTACGCAAACACATTAAACTTCATGAACCAAGAGAGAGAAGGGGGAAACTGGTTGCAACCAATCTAATGCAGCCACCACGTGGACGTCGACGTGCGGCTGTCATCCGACTCACTGCAGAAGAAACTCAGGTTCTAGCACAACAACCCCTTGACAATGCAGCCACTGTCTCGGAAAAAGTGCTGATTGCTTCTGTTGCTGAGAAAGATCGCATTAGTGAACTGAAGGATCCAGAGCAGCAGTATAATATGGAACCAATTCATCCGAACCAATGCAAATACTGCCCAAAAAGCTTTCGAAAGCCATCAGATTTAGTGCGTCACATTCGAATCCACACAGGAGAACGCCCGTACCAATGTGCTTGCTGTAATAAATGCTTCACTGTCAAATCAACTTTAGACAGTCATCTCAAAACACATGGAGGACAGAAGCTTTTTGCTTGCCATGTCTGCGGCTGCCTCTTTTCCACAAAAGGAAGCCTCAAGGTTCACATGCGTCTGCATACAGGTGCCAAACCTTTCAAGTGCCCACTCTGTGAGATGAGATTTCGTACATCAGGTCACCGTAAAGCCCACCTTATGTCTCATATGAAGCATGCAGCTGGTGATGGCAAAATTCCATCTCGGCTTACCACAACTGCACGTCGGAACAAGCGAGTTCCCGAGCAGGAGCAGCAACCGGATCAGGCAGAGGAATCGCAGTTGCAGAATGCAGCAACCAGCACTGCATCGGAGCTGGTGACTGAAACTATGACGCACATAACACTGGATCCTGCTACACTGAGTAGCCTGATACCAGGAGAACCATTCAGCTCCTCATTGCTAACCACAACAGCTGATGGAAATCACTTTATGGGAAACTTCCAGTTACAGCTGAGTGATGGTCTACAAATAGCAGGAGTGGATCCCTCTGGAACACTCCATTCCTATACCACACAGGCTATCCAGCTGGATGAGGCCCTTCTGCAGCAGCTCCAGGCTTCAAACATAATTATCCAAACTACACCAAGTAATGGCCATTTGCAAAATCCGGCAGAAGAGGGCCAGACTGTTGAAGATCAGCAGCAGCAACACGACACTGTAGATGCCAGTGCAGAAATGTCAACTGTCCGCTTTGAAATCCATACAGATGAACATGGACAGATCATCAATATTCAACCAGCAGTGCTGCAAGGAATTCCTTCAAGAAATGgAGGAGATATAACGTTTGATCTGACAGGTGGGTTGGATATGGAAGTAGTGGAAGGAGACCAACAAGCTCAAGCATCTCGCTTCCGTGTTACAGACAGCAGAAAGGAGCGGCGGACTCTAGTGGCTATTGGAAACCAGTTATCTAGTGGACAGAAAGATAAGGAATGTGAGGACTTCTTGTTATTTCATGATTGTGCTACGTgtggaaaacatttttcaaaacccaGCCAATTAGAGCGCCATACCCGTATTCACACTGGAGAGCGTCCATTTTCCTGTCCCCTGTGTGCTAAGACATTCAACCAGAAGAATGCACTCAACACACATATGAAAAGTCATACAGGGGAACGCCCTTTCCCTTGTCCCTACTGTCACTATTCCTTCACCCAAAAGGGTAACCTTAAGACGCACATGCGACGCGCCCATCAGTTCATTTCCTTAGAGCTAGGTACAAACTCAGCTACGACATCTACCACTTCTCCTTCCACTCCTACTCGATCATTGCTCAAACCCAAGCAGCAAACCACGCTAGATCTTGAGAAGGTTGTAGGAGATTTGTTTCCACAGATGAGGAATACCGCTCCTGCTGATCCTTGA
Protein Sequence: MEPYYSNCSFLLSFIELLMICTINMDEAKSGKDDMSDAHVVSLATETALNNSGLVFSDGSNMLASADVALDDGGTTYLTLPLHFVQDGSVLESGSSIHNLILKSLASSTVFLDTSQFTLLSGCSSQVILSTDGLVEDGDGKILLGTENEKSSDKVSIVPGLGVDIATIDLTNLTSEGGSGDVGSDPIENGEVIKPGCLTFSLDTTIHPPNKQNHEVHQPNSSRRGPGRPRREDTEVDPPIGKGPFKCHICGKEFSKSSQCKRHVKCHSDDKPFLCNLCSSSFNVESNLILHKATHNVDDPRCPECNKKFSRIASLKAHVMLHEKEESLFCSECGDEFSTMLQLEEHKREHQNEWVKPSNPQCRQCKWQFSRASALREHMKEHYKVKASLSHKSHKRNIDRSTFIHKCDTCHKCFQKPSQLVRHKRIHTGERPYKCQICPRAFNQKGSLQIHMSKHNGIKPFHCEFCAAAFSQKGNLRAHIVRVHTIPNSGEQVYKCMECPCVFKKLGSLNAHMSRMHCGDGSQKIEGPDNSDTSLIVNVRAVLSQLAELEAHVAGDKNKIPEQPSDSDILQQALVNSGLSGKDQSTLRGLEDSSCNHETKMKDGVCDESGTVRQHKESSTTSYITLADRGLDGTVRRYITKEFKKPSDLVRHIRIHTHERPYKCTHCYRSFAVKSTLTAHIRTHTGVRDHVCYICLKKFSSSSSLKVHIRMHTGTKPFACQLCDKTFRTTGHQKTHMLSHTKESSGTSGERVTKRKLVRQKPTLPVLPEVALQEPIIITNNGFVQAVARNSTVFLPGNTVSLDRPYVCNVCNAAFRKLSHLKQHIRMHTGERPFKCTLCDRRFISNGVLKAHQRTHEGVKSYKCHQCGNMFSTNGSLKRHMSTHSDLRPFMCPYCHKTFKTSVNCRKHMKTHKHELALQVAQQTAKEGERTNTLSSIPVDGQGPAVVTESTNFPPEGLGPDFTQAFSDQPFQVTSTTEHQEQEEVTFAQNTLVHTLAPDSLVDDAEPVNTPSVITHTLHADATGTITLPNLDGQHTLTQENIQEIERTLNEQIFGPSTNVTSDLVNVGEASSDLATRIEVGGSDSEAESTTTEDLAHTLGATASPSGHPDASALGTLSEQPKVDGRNKSSAEPPSNGSVFGNTFDSAGFESCVFTAMTLQSDPLELEGLGSGPAITTNMASILPPPEGAMPEPETAAASDSTSKPELLAELPMEGPVAAAAVAADEADKDKNYIPGRPFSADNPPGERPYKCKQCSRAFKKSYHLKEHARSHVGKNLSCTLCGRKCTTFGALRAHMKTHDGSRDYECDLCGCQFTTNGSLKRHMVVHSDERPLKCSICDAVFRTDHLLRKHIKLHEPRERRGKLVATNLMQPPRGRRRAAVIRLTAEETQVLAQQPLDNAATVSEKVLIASVAEKDRISELKDPEQQYNMEPIHPNQCKYCPKSFRKPSDLVRHIRIHTGERPYQCACCNKCFTVKSTLDSHLKTHGGQKLFACHVCGCLFSTKGSLKVHMRLHTGAKPFKCPLCEMRFRTSGHRKAHLMSHMKHAAGDGKIPSRLTTTARRNKRVPEQEQQPDQAEESQLQNAATSTASELVTETMTHITLDPATLSSLIPGEPFSSSLLTTTADGNHFMGNFQLQLSDGLQIAGVDPSGTLHSYTTQAIQLDEALLQQLQASNIIIQTTPSNGHLQNPAEEGQTVEDQQQQHDTVDASAEMSTVRFEIHTDEHGQIINIQPAVLQGIPSRNGGDITFDLTGGLDMEVVEGDQQAQASRFRVTDSRKERRTLVAIGNQLSSGQKDKECEDFLLFHDCATCGKHFSKPSQLERHTRIHTGERPFSCPLCAKTFNQKNALNTHMKSHTGERPFPCPYCHYSFTQKGNLKTHMRRAHQFISLELGTNSATTSTTSPSTPTRSLLKPKQQTTLDLEKVVGDLFPQMRNTAPADP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00396469; iTF_00370362;
90% Identity: -
80% Identity: -