Csec006117.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cryptotermes secundus
Gene Symbol
ZNF236
Assembly
GCA_002891405.2
Location
NW:2138639-2216379[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.23 6.6 6.9 6.3 1 21 227 247 227 249 0.94
2 28 0.013 0.36 10.9 0.2 1 23 255 277 255 277 0.95
3 28 4.1e-05 0.0012 18.7 0.3 2 23 283 304 283 304 0.97
4 28 0.067 1.9 8.6 0.1 3 23 312 332 310 332 0.95
5 28 0.00013 0.0037 17.2 0.9 2 23 343 364 343 364 0.97
6 28 0.00011 0.0031 17.4 5.7 1 23 387 409 387 409 0.98
7 28 1.5e-05 0.00042 20.1 1.2 1 23 415 437 415 437 0.99
8 28 0.0012 0.035 14.1 0.4 1 23 443 466 443 466 0.95
9 28 0.00021 0.0059 16.5 1.4 1 23 476 499 476 499 0.97
10 28 1.8e-06 5.1e-05 23.0 2.2 1 23 633 655 633 655 0.98
11 28 3.7e-06 0.00011 22.0 3.4 1 23 661 683 661 683 0.99
12 28 3.9e-05 0.0011 18.8 2.0 1 23 689 711 689 711 0.97
13 28 0.00056 0.016 15.1 3.3 1 23 717 739 717 739 0.97
14 28 9e-06 0.00026 20.8 1.9 1 23 805 827 805 827 0.98
15 28 2.4e-05 0.00067 19.5 2.1 1 23 833 855 833 855 0.99
16 28 2.9e-06 8.1e-05 22.4 0.7 1 23 861 883 861 883 0.98
17 28 0.00029 0.0081 16.1 7.6 1 23 889 911 889 911 0.98
18 28 0.00018 0.0052 16.7 6.5 1 23 1249 1271 1249 1271 0.99
19 28 0.0012 0.034 14.1 2.2 2 23 1277 1298 1276 1298 0.97
20 28 1.5e-05 0.00042 20.1 1.8 3 23 1306 1326 1304 1326 0.98
21 28 0.0034 0.097 12.7 2.4 2 23 1333 1354 1332 1354 0.97
22 28 1.8e-07 5.2e-06 26.1 0.7 2 23 1436 1457 1435 1457 0.98
23 28 0.02 0.58 10.2 6.3 1 23 1463 1485 1463 1485 0.97
24 28 5.1e-05 0.0015 18.4 3.1 1 23 1491 1513 1491 1513 0.97
25 28 0.00043 0.012 15.5 2.3 1 23 1519 1541 1519 1541 0.98
26 28 1.5e-05 0.00044 20.1 3.3 1 23 1812 1834 1812 1834 0.96
27 28 4e-05 0.0012 18.7 0.8 1 23 1840 1862 1840 1862 0.98
28 28 1e-07 2.8e-06 26.9 2.7 1 23 1868 1891 1868 1891 0.97

Sequence Information

Coding Sequence
ATGAAGAACATGGATGAGGTGAACTGTAGAAAGGGTGATGTGTCAAATACACAGGTTGTCTCTCTTGCCACAGAAACTACCCTTAATAACTCTGGACTTATGTTTTCTGATGGAACCAATATGCTTGCTTCTTCAGATTTAGCCCTGGATGATAGTGGCACAACATATGTGACTCTTCCACTGCATTTACTTCAGGATGGTTCAATACTTGATTCAGGATCTGGAGTTCATAACTTAATTCTTAAAAATCTAGCCAGCAACACAGTGTATCTCGATACTAGTCAGTTGACCCTTCTGTCTGGGGGTTCTAGTCAAGTAGTATTAAGTACAGATGGCCttgttgaagatggagatggAAAGATTATATTGGATGCAGAAAATGCAGACAAGAATTCCAACAAAATTTCAGTTATACCAGGCCTGGGAGTTGATATTTCAACCATTGATTTGACAAACCTTAGTGGTGAAGGAGGAAGTGGAGATGTAGTTTCTGATCCAACAGAGGATGGAGAAGTCACCAAGCGTGGGTGTCTCACATTTGATCTCCCCACAGCCATTTCTTCCCAATCAGCTAGTAAGCAAAATCATCAGGTTCATCAGCGTACATCATCAAGAAGAGGTCCTGGACGACCTAGGAGGGAAGATACAGAAGTGGATCCTCCCATTGGAAAGGGTCCATTTAAGTGCCCTATTTGTGCTAAGGAGTTTTCAAAATCATCACAGTGCAAGAGACATGTGAAGTGCCATTCTGATGACAAGCCATTTCTTTGTAATTTGTGTCCATCATCATTCAATGTGGAGTCAAATTTGATTCTTCATAAGGCAACTCATAATGTAGATGACCCACGATGTCCTGAGTGTAATAAGAAGTTCTCTCGCATTGCAAGTTTAAAGGCCCATGTGATGCTGCATGAGAAGGAGGAGAGCCTGTTCTGCTCTGAGTGTGGTGATGAGTTCAGCACAATAGCCCAACTTGAAGAACATAAAAAGGAGCACCAAAATGAATGGGTGAAACCTTCTACCCCACAGTGTCGACAGTGCAAATGGCAATTCTCTCGTGCTTCAGCACTGCGTGAGCATATGAAGGAACATTATAAGgTAAAAGCTTCGCTGTCACACAAAAGCCATAAACGTAACATAGATCGAAGCACTTTCATCCATAAATGTGATACCTGCGACAAATGCTTCCAGAAACCAAGCCAATTGGTCCGACATAAGAGGATTCACACAGGTGAAAGGCCATATAAGTGCCAGTTATGCTCAAGAGCTTTCAACCAGAAAGGCTCTCTACAAATTCATATGTCCAAACACAATGGTATTAAACCATTTCACTGTGAATTTTGTGCTGCTGCTTTCAGTCAGAAAGGTAATCTCCGTGCTCACATTGTACGAGTTCATACAATCCCAAACTCAGGAGAACAGGTCTATAAATGCATGGAGTGCCCATGTGTGTTTAAAAAATTGGGAAGCCTTAATGCACATATGAGTCGAATGCATTGTGGTGATGGCACACAGAAGATTGATGGATCAGATACCAGTGATACATCCCACATGGTGAATGTGCGAGCTGTGTTGTCGCAGTTGGCAGAACTGCAAGCAGATGTGGCAGGAGACAAAAGCAAGATGCCTGACCAGCCAAGTGATGCAGACATTCTTCAGCAGGCTCTGGTTAATAGTGGCCTCTCTGGGAAAGATCAGTCTGCTCTGCGAGGACTGCAGGATGGTTCTTCCAAACAGGAAAGCAAAATGAAGGGTGATGTTAGTGGCGACACTGGAACAGTTCGCCCACACAAGGACAGCAGTACAACAAGCTACATTACATTGGCTGACAGAGGACTTGATGGAACAGTGAGGAGATACATCATTCGGCAACGTCGTGTGGGGACAGTTCGATGGCATCAGTGTTCATACTGTACCAAAGAATTCAAGAAACCCTCAGATCTAGTTAGGCATATCAGAATACACACACATGAACGGCCATACAAGTGCACTCATTGTTTCCGGTCCTTTGCTGTGAAGTCTACACTCACTGCCCACATTCGGACGCACACTGGTATCAGGGACCATGTGTGCTATATGTGCCTCAAAAAATTCTCTTCTGCTAGCAGTCTTAAAGTTCACATACGGATGCATACAGGTACCAAACCCTTTGCATGTCAGCTCTGTGACAAGACATTCCGAACTACGGGTCATCAAAAGACTCACATGTTGTCTCATACCAAAGAAGGTAGTGGAACATCCGAAGAAAGGGTTGCAAGGCGAAAACTGGTGAGACAGAAACCTACTCTTCCTGTCTTACCAGAAGTTGCTTTGCAGGAACCAATCATTATCACAAATAATGGATTTGTACAAGCTGTGGCACGCAACAGTACTGTTTTCCTTCCTGGTAACACTGTGAGTTTGGATCGTCCATACATGTGTAATGTATGCAATGCAGCATTTCGTAAATTAAGTCATCTCAAACAGCATATTCGCATGCACACTGGTGAACGCCCATATAAGTGCACGCTATGTGATAGgCATTTCATATCAAATGGGGTGCTCAAAGCTCACCAACGTACACATGAAGGAGTAAAATCATACAAGTGTCCAGAATGTAGTAACATGTTCTCTACAAATGGAAGCTTAAAACGTCATATGGGGACACACAGTGATGTCAGGCCCTTCATGTGTCCATACTGTCATAAAACATTCAAAACATCCGTCAACTGCCGCAAACACATCAAGACTCATAAGCATGAACTGGCTCTACAGGTTGCACAGCAAACAGCCAAAGAAGAAGGAACTAATATTCTCAGCACGATACCAGTAAATGGGCAAGGTCCTGCCGTGGTGACAGAAAGTACAAACTTCCCGCCTGAAGGTCTAGGTCCAGACTTCACTCAAGCATTTTCAGATCAGCCATTTCAGGTGGCCTCAACCACTGAACAACAGGAGCAAGAGGAATCAACATTTGCTCAGAATACGCTTGTTCATACACTTGCTTCTGGTCCTCTGGGGGACGGTGCTGATCCTGTAACAGCTCCTGGGGTGATAACACATACTTTGCATGCTGATGCCACAGGGACCATTACATTGCCAAGCCTTGCTGGACAACATACTTTGACTCAGGAGAGCATCCGGGAAATTGAGCGTACACTGAATGAGCAGATTTTTGGTACTTCTGCAACTGTAACATCGGATGTCGTAAATGTTGGGGGAGCATCCAGTGACCTGGCCACAAGGGTCGAAGTTGGCGGTAGTGACAGTGAAGTCGAGTCCACCACAACTGAAGATTTGGCACGTACTCTTGGAGCTGCTACTTCTCCATCAGCTCAGCCTGATCCTTCAGCCCTAGGCACTTTGTCAGAAGGACATAAAGATGATAACAGAAACAAGAATCCAGCAGAACCTTCTGGTAACAGCAGTGTATTTGGCACCACCTTTGATTCAGCAGGTTTTGAATCTTGTGTCTTCTCAGCTATTACTCTTCAGAGTGATCCTCTTGAACTTGAAGGTCTGGGATCAGGTTCATCCATGACTACGAACATGGCCAGCATTCTCCCTCCATCTGGGCACCCAGTGCCTGAACCTCAGTCTTCTGGAACAGCTGACACTACTTCTAAGCCTGAACCCTCAGTAATGTCTCCGATGGATGGCccagttgctgctgctgctgcagtaGCGGCTGATGACGCAGAGAAAGATAAAAACTATGTTCCAGGACGACCTTTCAGTTCAGATGCTCCACCTGGTGAACGGCCTTTCAAATGCAAACAGTGCAGTCGTGCATTTAAGAAGTCATATCATCTTAAAGAACATACAAGAAGCCATGTAGGAAAGAGCTTAAGCTGTTCATTGTGTGAAAGGAAGTGTACTACCTTCGGTGCTCTTAGGGCTCATATGAAAACACATGATGGCAATAGAGATTTTGGATGTGATATATGTGGTTGCCGATTCACAACAAATGGTTCTCTGAAACGTCACATGAGTGTTCATAGCAATGAAAGGCCATTGAAATGCTGTATCTGCAATGCAATGTTCCGGACAGACCAGCTGTTACGTAGACACATCAAGCTTCATGAACCAAGGGAGAGGAAGGGGAAGCTGGTAGCAACCAATCCATTACAGTCACCACGTGGACGTCGGCGTGCAGCTGTCATCAGACTCACTGCAGAAGAAACTCAGGTTCTAGCACAGCAACCTCTTGACAATGCAACTACTGTCTCAGAAAAAGTGCTCATTGCTTCAGTTGCTGAAAAGGACCGTATTAGTGAACTGAAGgATCCTGATCAACAGTACAATATGGAACCAATTCATCCAAACCAATGCAAATATTGCCCTAAGAGTTTCCGAAAGCCATCAGATCTAGTGCGTCATATTCGAATCCACACAGGAGAGCGGCCATACCAGTGTGCCTGCTGTAATAAATGCTTCACTGTCAAGTCAACATTAGACAGTCACCTTAAAACACATGGTGGACAGAAGCTTTTTGCCTGCCATGTTTGTGGTTGCCTTTTCTCGACTAAAGGAAGCCTCAAGGTTCACATGCGTCTGCACACAGGTGCCAAACCTTTCAAATGCCCACTCTGTGAGATGAGATTTCGTACATCTGGTCACCGTAAAGCTCACCTTATGTCTCATATGAAGCACGCAGCTAGTGGTGGTGGGAAACTTTCATCTCAACTTACAACATCTGCACGTCGAAACAAACAAGTTGCCGAACAGCAACAACCAGAGCAAGAACATGAATCAGAGCTGCAGAACCCAGCAACCAGCACCACATCAGAGCTAGTGACTGAAACTATGACACACATAACACTGGATCCTGCAACACTAAGTAGCCTGATACCAGGAGAACCATTCAATTCCTCACTGCTGACAACAGCTGCTGATGGAAGTCACATTATGGGCAACTTTCAGTTGCAGCTGACTGATGGTTTGCAAATAGCAGGAGTAGATCCATCTGGAATGCTCCATTCTTATACAACACAGGCTGTCCAGCTGGATGAGGCTCTTCTCCAGCAATTTCAGGCCTCAAACATAATTATCCAGACTACAGAAAGTAATGACCAGATGCAGACTCATGTAAGAGAGGGCAACACAGTTGAAGATCGACAGCAGCAACAAGCCACAGTAGATGCTGATGCTGATGCTGAAATGGCAACTGTGCGCTTTGAAATCCACACAGATGAGCACGGACAGATTATCAATATTCAACCAGCCCTGTTACACGAAATTCCTTCAAGAAATGGAGATATAACATTTGACCTGACAGGTGACTTGGATATGGAAGTAGTGGAAGGTGATCAACAGTCTCAGGCATCTCGCTTCCGTGTTACAGACAGTAGAAAAGAAGGACGCACTCTTGTGGCTGTGTCAATGGGAAACCATATGCCTGATGGACACAAAGATAAGGAAGGCGGAAATACTACAGAAGACTACTTATTGTTTCATGATTGTGCTACATGTGGAAAACACTTTTCAAAGCCCAGTCAGTTGGAGCGTCACACTCGTATACACACTGGAGAGCGTCCGTTTACCTGTCCCCTCTGTGCCAAGACATTCAACCAAAAGAATGCACTCAACACACATGTGAAAAGTCATACCGGGGAACGTCCTTTCCCTTGTCCCTACTGTCACTATTCTTTTACACAAAAGGGCAATCTGAAAACACATATGCGACGTGCCCATCAGTTCAGTTCTCTTGAGCTAGCTACGAACTCAGCTATTACAGTTACTACATCCATAGCTTCTCCTTCCGCTCCTACTCGATCGTTGCTCAAACCCAAGCAGCAGTCTACACTGACAAACTTGAACAGTAATGTAGACTTGGCTGCTGGGAAATCTCTCGATCTTGAGAAAGTTGTAGGTGATCTGTTTCCACAGATGAGGAATACCACTCCTGCTGACCCTTAA
Protein Sequence
MKNMDEVNCRKGDVSNTQVVSLATETTLNNSGLMFSDGTNMLASSDLALDDSGTTYVTLPLHLLQDGSILDSGSGVHNLILKNLASNTVYLDTSQLTLLSGGSSQVVLSTDGLVEDGDGKIILDAENADKNSNKISVIPGLGVDISTIDLTNLSGEGGSGDVVSDPTEDGEVTKRGCLTFDLPTAISSQSASKQNHQVHQRTSSRRGPGRPRREDTEVDPPIGKGPFKCPICAKEFSKSSQCKRHVKCHSDDKPFLCNLCPSSFNVESNLILHKATHNVDDPRCPECNKKFSRIASLKAHVMLHEKEESLFCSECGDEFSTIAQLEEHKKEHQNEWVKPSTPQCRQCKWQFSRASALREHMKEHYKVKASLSHKSHKRNIDRSTFIHKCDTCDKCFQKPSQLVRHKRIHTGERPYKCQLCSRAFNQKGSLQIHMSKHNGIKPFHCEFCAAAFSQKGNLRAHIVRVHTIPNSGEQVYKCMECPCVFKKLGSLNAHMSRMHCGDGTQKIDGSDTSDTSHMVNVRAVLSQLAELQADVAGDKSKMPDQPSDADILQQALVNSGLSGKDQSALRGLQDGSSKQESKMKGDVSGDTGTVRPHKDSSTTSYITLADRGLDGTVRRYIIRQRRVGTVRWHQCSYCTKEFKKPSDLVRHIRIHTHERPYKCTHCFRSFAVKSTLTAHIRTHTGIRDHVCYMCLKKFSSASSLKVHIRMHTGTKPFACQLCDKTFRTTGHQKTHMLSHTKEGSGTSEERVARRKLVRQKPTLPVLPEVALQEPIIITNNGFVQAVARNSTVFLPGNTVSLDRPYMCNVCNAAFRKLSHLKQHIRMHTGERPYKCTLCDRHFISNGVLKAHQRTHEGVKSYKCPECSNMFSTNGSLKRHMGTHSDVRPFMCPYCHKTFKTSVNCRKHIKTHKHELALQVAQQTAKEEGTNILSTIPVNGQGPAVVTESTNFPPEGLGPDFTQAFSDQPFQVASTTEQQEQEESTFAQNTLVHTLASGPLGDGADPVTAPGVITHTLHADATGTITLPSLAGQHTLTQESIREIERTLNEQIFGTSATVTSDVVNVGGASSDLATRVEVGGSDSEVESTTTEDLARTLGAATSPSAQPDPSALGTLSEGHKDDNRNKNPAEPSGNSSVFGTTFDSAGFESCVFSAITLQSDPLELEGLGSGSSMTTNMASILPPSGHPVPEPQSSGTADTTSKPEPSVMSPMDGPVAAAAAVAADDAEKDKNYVPGRPFSSDAPPGERPFKCKQCSRAFKKSYHLKEHTRSHVGKSLSCSLCERKCTTFGALRAHMKTHDGNRDFGCDICGCRFTTNGSLKRHMSVHSNERPLKCCICNAMFRTDQLLRRHIKLHEPRERKGKLVATNPLQSPRGRRRAAVIRLTAEETQVLAQQPLDNATTVSEKVLIASVAEKDRISELKDPDQQYNMEPIHPNQCKYCPKSFRKPSDLVRHIRIHTGERPYQCACCNKCFTVKSTLDSHLKTHGGQKLFACHVCGCLFSTKGSLKVHMRLHTGAKPFKCPLCEMRFRTSGHRKAHLMSHMKHAASGGGKLSSQLTTSARRNKQVAEQQQPEQEHESELQNPATSTTSELVTETMTHITLDPATLSSLIPGEPFNSSLLTTAADGSHIMGNFQLQLTDGLQIAGVDPSGMLHSYTTQAVQLDEALLQQFQASNIIIQTTESNDQMQTHVREGNTVEDRQQQQATVDADADAEMATVRFEIHTDEHGQIINIQPALLHEIPSRNGDITFDLTGDLDMEVVEGDQQSQASRFRVTDSRKEGRTLVAVSMGNHMPDGHKDKEGGNTTEDYLLFHDCATCGKHFSKPSQLERHTRIHTGERPFTCPLCAKTFNQKNALNTHVKSHTGERPFPCPYCHYSFTQKGNLKTHMRRAHQFSSLELATNSAITVTTSIASPSAPTRSLLKPKQQSTLTNLNSNVDLAAGKSLDLEKVVGDLFPQMRNTTPADP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01567148;
90% Identity
-
80% Identity
-