Basic Information

Insect: Coptotermes formosanus
Gene Symbol: ZNF236
Assembly: GCA_013340265.1
Location: BLKM01011269.1:1633461-1674525[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 3.3 1.6e+02 2.6 8.5 1 21 223 243 223 245 0.90

2 28 0.017 0.82 9.8 0.4 1 23 251 273 251 273 0.95

3 28 2.4e-05 0.0012 18.7 0.3 2 23 279 300 279 300 0.97

4 28 0.086 4.2 7.5 0.2 3 23 308 328 306 328 0.95

5 28 7.6e-05 0.0037 17.2 0.9 2 23 339 360 339 360 0.97

6 28 0.00063 0.03 14.3 8.6 1 23 383 405 383 405 0.98

7 28 8.6e-06 0.00042 20.1 1.2 1 23 411 433 411 433 0.99

8 28 0.00072 0.035 14.1 0.4 1 23 439 462 439 462 0.95

9 28 0.00012 0.0059 16.5 1.4 1 23 472 495 472 495 0.97

10 28 1e-06 4.9e-05 23.1 2.1 1 23 629 651 629 651 0.98

11 28 2.2e-06 0.0001 22.0 3.4 1 23 657 679 657 679 0.99

12 28 9e-06 0.00044 20.1 1.6 1 23 685 707 685 707 0.97

13 28 0.00013 0.0062 16.4 2.3 1 23 713 735 713 735 0.97

14 28 8.1e-06 0.00039 20.2 4.2 1 23 801 823 801 823 0.99

15 28 4.2e-06 0.0002 21.1 1.7 1 23 829 851 829 851 0.99

16 28 1.7e-06 8.1e-05 22.4 0.7 1 23 857 879 857 879 0.98

17 28 0.00017 0.0081 16.1 7.6 1 23 885 907 885 907 0.98

18 28 6.9e-05 0.0034 17.3 5.2 1 23 1249 1271 1249 1271 0.99

19 28 0.00065 0.031 14.2 2.4 2 23 1277 1298 1276 1298 0.97

20 28 2e-05 0.00097 19.0 1.5 3 23 1306 1326 1304 1326 0.97

21 28 0.00041 0.02 14.9 1.9 2 23 1333 1354 1332 1354 0.96

22 28 5.3e-07 2.6e-05 23.9 0.8 2 23 1436 1457 1435 1457 0.98

23 28 0.015 0.74 9.9 6.7 1 23 1463 1485 1463 1485 0.98

24 28 3e-05 0.0015 18.4 3.1 1 23 1491 1513 1491 1513 0.97

25 28 0.00025 0.012 15.5 2.3 1 23 1519 1541 1519 1541 0.98

26 28 1e-05 0.00049 19.9 3.8 1 23 1805 1827 1805 1827 0.96

27 28 0.00037 0.018 15.0 1.0 1 23 1833 1855 1833 1855 0.97

28 28 1.7e-06 8.1e-05 22.4 2.3 1 23 1861 1884 1861 1884 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	3.3	1.6e+02	2.6	8.5	1	21	223	243	223	245	0.90
2	28	0.017	0.82	9.8	0.4	1	23	251	273	251	273	0.95
3	28	2.4e-05	0.0012	18.7	0.3	2	23	279	300	279	300	0.97
4	28	0.086	4.2	7.5	0.2	3	23	308	328	306	328	0.95
5	28	7.6e-05	0.0037	17.2	0.9	2	23	339	360	339	360	0.97
6	28	0.00063	0.03	14.3	8.6	1	23	383	405	383	405	0.98
7	28	8.6e-06	0.00042	20.1	1.2	1	23	411	433	411	433	0.99
8	28	0.00072	0.035	14.1	0.4	1	23	439	462	439	462	0.95
9	28	0.00012	0.0059	16.5	1.4	1	23	472	495	472	495	0.97
10	28	1e-06	4.9e-05	23.1	2.1	1	23	629	651	629	651	0.98
11	28	2.2e-06	0.0001	22.0	3.4	1	23	657	679	657	679	0.99
12	28	9e-06	0.00044	20.1	1.6	1	23	685	707	685	707	0.97
13	28	0.00013	0.0062	16.4	2.3	1	23	713	735	713	735	0.97
14	28	8.1e-06	0.00039	20.2	4.2	1	23	801	823	801	823	0.99
15	28	4.2e-06	0.0002	21.1	1.7	1	23	829	851	829	851	0.99
16	28	1.7e-06	8.1e-05	22.4	0.7	1	23	857	879	857	879	0.98
17	28	0.00017	0.0081	16.1	7.6	1	23	885	907	885	907	0.98
18	28	6.9e-05	0.0034	17.3	5.2	1	23	1249	1271	1249	1271	0.99
19	28	0.00065	0.031	14.2	2.4	2	23	1277	1298	1276	1298	0.97
20	28	2e-05	0.00097	19.0	1.5	3	23	1306	1326	1304	1326	0.97
21	28	0.00041	0.02	14.9	1.9	2	23	1333	1354	1332	1354	0.96
22	28	5.3e-07	2.6e-05	23.9	0.8	2	23	1436	1457	1435	1457	0.98
23	28	0.015	0.74	9.9	6.7	1	23	1463	1485	1463	1485	0.98
24	28	3e-05	0.0015	18.4	3.1	1	23	1491	1513	1491	1513	0.97
25	28	0.00025	0.012	15.5	2.3	1	23	1519	1541	1519	1541	0.98
26	28	1e-05	0.00049	19.9	3.8	1	23	1805	1827	1805	1827	0.96
27	28	0.00037	0.018	15.0	1.0	1	23	1833	1855	1833	1855	0.97
28	28	1.7e-06	8.1e-05	22.4	2.3	1	23	1861	1884	1861	1884	0.97

Sequence Information

Coding Sequence: ATGGATGATGTTGACTGTGTTAAGGGTGAGGTGTCAGATACAGAAGTTGCATCACTTGCAACTGAAACTGCCCTTAATAACTCAGGACTTGTGTTTTCTGATGGCACCAATATGTTAGCTTCTGCAGATTTAGCCCTGGATGATGGCACAACATACGTGACACTTCCACTACATTTACTTCAAGATGGCTCAATACTTGATTCAGGATCTGGCATTCATAACTTAATTCTTAAAAACCTAGCAAGCAGCACAGTGTATCTCGATTCTAGTCAGTTGGCCCTTCTGTCTGGGGGTTCTAGTCAAGTAGTATTAAGTACAGATGGCCTTGTTGGAGATGGAAATGGCAGGATTATACTGGATGCAGAGTATGCAGAAAAGAATTCCAATAAGATTTCAATCATACCGGGCCTAGGGGTTGATATTGCAACCATTGACCTGACAAACATGGGTGGTGAAGGAGAAAATGGAGGTGTAGTTACTGATCCAACTAATAATGGAGAAATTATGAAGTCTGGGTGTCTGACACTTGATCTGTCCAGTGCCATCCCACTGACATCCACCAGTCAACAAAATTATCAAGTGCATCAGCCCAGTTCATCAAGAAGAGGACCAGGGCGACCAAGGAGGGAAGACACGGAAGTGGATCCTCCTGTTGGGAAGGGTCCATTCAAGTGTCACATATGTGGTAAGGAATTCTTGAAGTCATCGCAGTGCAAGAGACATGTGAAATGCCATTCAGATGATAAACCATTTCTGTGCAATTTATGTTCATCATCATTCAATGTGGAGtcAAATTTGATTTTGCACAAGGCTACTCATAATGTAGATGATCCACGGTGCCCTGAGTGTAATAAGAAGTTCTCTCGCATTGCAAGTTTAAAAGCACATGTTATGCTACATGAAAAAGAGGAGAGCCTATTCTGTTCTGAGTGTGGCGATGAGTTCAGCACGATGATCCAATTGGAGGAACATAAAAAGGAGCATCAAAATGAATGGGTGAAGCCTACTAACCCACAGTGTCGTCAGTGCAAATGGCAGTTCTCTCGTGCTTCAGCACTACGTGAACATATGAAGGAACATTACAAGGTAAAAGCTTCACTGTCACACAAGAGTCATAAACGTAACATAGATCGAAGCACTTTTGTCCATAAATGTGATACGTGTCACAAGTGCTTCCAGAAACCAAGCCAGTTGGTCCGACATAAGAGGATCCACACGGGTGAGAGGCCGTATAAGTGCCAGTTATGCTCAAGGGCTTTCAACCAGAAGGGCTCTCTACAGATTCATATGTCCAAACACAATGGTATTAAACCATTtcattgtgaattttgtgctgCTGCTTTCAGTCAAAAGGGTAACCTTCGTGCTCACATAGTACGAGTTCATACAATTCCAAACTCAGGAGAACAGGTCTATAAATGCATGGAGTGCCcatgtgtgtttaaaaaattgggAAGCCTTAATGCACATATGAGTCGAATGCACTGCGGTGATGCTGCACAGAAGACTGAAGTGTCAGGTACCTCTGATGCATCCCACATGGTGAATGTGCGAGCTGTGTTGTCGCAGTTGGCAGAATTGGAAGCAGAGGTAGCAGGAAACAAAACCAAGACACTTGACCATCCAAGTGATGCAGATATCCTGCAGCAAGCCTTGGTTAACAGTGGCCTGTCTGGGAAGGATCAACCTGCTGTTCAAGGACTGCAAGGTAGTGCTTCTAAgcaggaaaacaaaatgaaggGTGGTATCAGAGATGAGAGTGGAACAGTTCGCCAACACAAGGACACCAGCACTACCAGTTATATCACACTTGCTGACAGAGGACTTGATGGAACTGTGAGGAGATATATCATTCGGCAACGTCGTGTGGGGACAGTTCGATGGCATCAGTGTTCATACTGTTCTAAAGAATTCAAGAAACCATCAGATCTGGTTAGGCATATcagaatacacacacatgaacGTCCATACAAGTGCACTCACTGCTTCCGGTCCTTTGCTGTTAAGTCCACCCTCACTGCTCACATTCGCACACACACTGGTGTCCGGGATCACGTGTGTTATATATGCCTCAAGAAGTTCTCTTCTGCGAGCAGTCTTAAAGTTCACATACGGATGCATACAGGTACAAAACCATTTGCATGTCAGCTGTGTGACAAGACATTCCGAACCACGGGTCATCAAAAGGCTCACATGTTGTCTCATACCAAAGAAAATGGTGGAACTACAGAAGGAAGGGTTTCAAGGCGGAAACTGGTGAGACAGAAACCCACTCTTCCAGAGTTACCAGAAGTTGCTTTGCAGGAACCAATTATTATCACAAATAATGGATTTGTGCAAGCCGTGGCCCGAAACAGTACTGTTTTCCTTCCTAGTAACACTGTGAGTCTGGATCGTCCATACACATGTCATGTGTGCAATGCAGCATTCCGTAAATTAAGTCATCTCAAACAGCACATCCGCATGCACACTGGTGAACGCCCATACAAGTGCAACCTATGTGGCAGGCACTTCATATCCAATGGGGTTCTGAAAGCTCACCAGCGTACACATGAAGGTGTAAAATCTTACAAGTGCCCTGAATGTAGTAACATGTTCTCTACAAATGGAAGCTTAAAACGTCACATGGGTACACACAGTGACTTGAGACCCTTCATGTGTCCATACTGTCATAAGACTTTCAAAACATCTGTCAACTGCCGCAAACACATCAAAACACATAAGCATGAACTGGCTCTGCAGGTTGCACAGCAAACCGTTAAAGAAGATGGAACTAATATACTCAACAGTATACCAGTAAGTGGACAAGGTTCTGCTGTTGTGACGGAAAGTACAAACTTCCCTCCTGAAGGTTTGGGTCCAGATTTTGCCCAAGCATTTTCAGATCAGCCATTTCAGGTGACATCAACCACTGAGCAACAAGAGCAAGAAGAATCAGCTTTTGCCCAGAACACTCTCGTTGATACACTGACGTCTGGTCCTCTGGAGGACAGCACTGATCCTGTAACAGCTCCAGCAATGATAACACACACTTTGCATGCTGATGCCACAGGGACCATTACATTGCCAAGTCTTGCTGGCCAGCATACTTTGACACAGgaaaatatcCGTGAAATTGAGCGTACATTGAACGAGCAAATTTTTGGTACATCTGCAAATGTAACGTCAGATCTTGTAAGTGTTGGGGGAGCGTCCAGTGATCTGGCTGCAAGAGTCGAAGTTGTAGGCAGCGACAGTGAAGTTGAGTCTACCACAACGGAAGATTTAGCACGTACTCTTGGGGCCGCTTCCTCTCCATCAGCTCAGCCTGATGCCTCGACACTAGGCACTTTGTCAGAAGGACCTAAGGACAACGGCAGAAATAAGAACACAGCAGAACCTGCCAGTAACAGTAGTGTGTTTGGAACCTCTTTTGATTCAGCAGGTTTTGATTCATGTGTTTTCTCAGCAATTACTCTTCAGAGTGATACCCTAGAACTAGAAGGTCTGGGATCGGGCTCTGCCATGACCACTAACATGGCCAGCATTCTGCCTCCACCTGGGGATGCAATGCCTGAGCCTGGGACTGCAGCAGCATCTGCCCCTACTTGCAAGTCTGAACTCTTAGTAATGCCTCCAATGGATGGtccagttgctgctgctgctgccgccgccgcagCAGTGGCAGCAAATGAAGCAGATAAAGATAAGAACTATGTTCCGGGAAGACCTTTTAGTGCAGATGCTCCACCTGGTGAACGGCCTTACAAaTGCAAACAATGCAGTCGTGCATTTAAGAAGTCATATCATCTAAAGGAACATGCAAGAAGTCATGTGGGAAAGAATTTAAGCTGTACATTATGTGAAAGAAAGTGTACTACCTTCGGAGCACTCAGGGCACATATGAAAACACATGATGGCACTAGAGATTTTGGGTGTGACTTGTGTGGTTGCCGATTCACAACAAGTGGATCACTGAAACGCCACATGATTGTCCATAGTGATGAAAGGCCATTGAAATGCTCCATCTGCAATGCAACGTTCCGGACAGACCATTTGTTACgcagacacatcacacttcaTGAACCAAGGGAGAGAAAGGGGAAACTGGTAGCAACAAATCCATTGCAGCCACCACGTGGACGCCGGCGTGCAGCTGTTATTCGACTGACTGCAGAAGAAACTCAGGTTTTAGCTCAGCAACCTCTAGACAATGCAGCTACTGTCTCAGAGAAAGTACTGATTGCGTCTGTTGCTGAGAAGGACCGCATTAGTGAATTGAAGGACCCTGAACAGCAGTACAATATGGAGCCAATTCATCCAAACCAATGCAAATTCTGCCCAAAGAGTTTCCGAAAGCCATCAGACCTAGTGCGACACATTCGAATCCATACAGGAGAGCGGCCATACAAGTGTGCATGTTGTAATAAATGCTTCACTGTTAAGTCAACATTGGACAGTCACCTTAAAACACATGGTGGACAGAAACTCTTTGCCTGTCATGTCTGTGGTTGCCTGTTCTCCACAAAAGGGAGCCTGAAAGTACACATGCGTCTGCATACAGGTGCTAAACCTTTCAAGTGTCCACTCTGTGAGATGAGATTTCGTACATCGGGTCACCGTAAAGCCCACCTTATGTCTCATATGAAGCATGTGACTGGTGACAGCAAACTTTCTTCTCAACTGACCATATCTGCACGTCGAAGCAAGCAGGTTCCTGGCCAACAGCAAGAGCAGGAGTCAGAAGTACAGAACCCAGCAACCAGCACCACATCAGAGCTAGTGACTGACACCATGACACACATAACACTGGATCCTGCTACACTAAGTAGCCTGATGCCAGGAGAACCATTCAACTCATCACTGTTGACTGCGACAGCTGATGGAAATCATGTTGTGGGTAACTTCCAGCTGCAGCTGACTGATGGTTTCCAGATAGCTGGTGTAGATCCATCTGGAACCGTCCATTCCTATACCACACAGGCTGTTCAGCTGGATGAGGCTCTTTTGCATCAATTCCAGGCCTCCAATATAATTATCCAAACCACACAAAGTAATAGCCAGGCACAAAATCATGTAGAAGAGGGCAACACATTAGAAgatcagcagcagcaagaagtCACAGTGGATGCTGGTGCAGAAGTGTCAACTGTGCGCTTTGAAATCCATACAGATGAACATGGACAGATCATCAATATTCAGCCAGCTGTATTACAGGAAATTGCTTCTAGGAATGGAGGAGATATAACATTTGACCTGACAGGTGGCCTGGATATGGACGCTGTAGAAGGAGACCGCCAGCCTCAGACAGCTCGATTCCATGTCACAGACTGCAGAAAGGATGAACAGGTTCTGGGACCTATAGGAAACCAGACTTCTGGTGGACAGAAAGATAAGGAAAGTGGCAGTACATCAGATGAATACTTATTATTTCACAATTGTGCTACATGTGGAAAACACTTTTCAAAGCCCAGCCAGCTGGAGCGACATACTCGAATTCACACGGGAGAACGTCCTTTTGCCTGTTTCCTGTGTGCAAAGACATTCAACCAGAAGAATGCACTCAACACACACCTGAATAGTCACACGGGAGAACGTCCTTTTCCTTGCCCATACTGTCACTATTCCTCCACACAGAAGGGTAATCTTAAGACACACATGCGACGTGCTCATCGGTTTAGTTCTCTCGAGGTCAGTACGAACTCAACTGTCACAGTTACCACATCCACAACTTCTCCTTCGACTTCTACCCGATCATTGCTCAAACCCAAGCGGCAGCCTACACTAACAAACTTGAACAGTAGTGTAGACTTAGCTACAGGGAAATCTCTGGATCTTGAGAAAGTTGTAGGTGATTTGTTTCCACAGATGAGGAATACCACTTCTACTGACCTTTAA
Protein Sequence: MDDVDCVKGEVSDTEVASLATETALNNSGLVFSDGTNMLASADLALDDGTTYVTLPLHLLQDGSILDSGSGIHNLILKNLASSTVYLDSSQLALLSGGSSQVVLSTDGLVGDGNGRIILDAEYAEKNSNKISIIPGLGVDIATIDLTNMGGEGENGGVVTDPTNNGEIMKSGCLTLDLSSAIPLTSTSQQNYQVHQPSSSRRGPGRPRREDTEVDPPVGKGPFKCHICGKEFLKSSQCKRHVKCHSDDKPFLCNLCSSSFNVESNLILHKATHNVDDPRCPECNKKFSRIASLKAHVMLHEKEESLFCSECGDEFSTMIQLEEHKKEHQNEWVKPTNPQCRQCKWQFSRASALREHMKEHYKVKASLSHKSHKRNIDRSTFVHKCDTCHKCFQKPSQLVRHKRIHTGERPYKCQLCSRAFNQKGSLQIHMSKHNGIKPFHCEFCAAAFSQKGNLRAHIVRVHTIPNSGEQVYKCMECPCVFKKLGSLNAHMSRMHCGDAAQKTEVSGTSDASHMVNVRAVLSQLAELEAEVAGNKTKTLDHPSDADILQQALVNSGLSGKDQPAVQGLQGSASKQENKMKGGIRDESGTVRQHKDTSTTSYITLADRGLDGTVRRYIIRQRRVGTVRWHQCSYCSKEFKKPSDLVRHIRIHTHERPYKCTHCFRSFAVKSTLTAHIRTHTGVRDHVCYICLKKFSSASSLKVHIRMHTGTKPFACQLCDKTFRTTGHQKAHMLSHTKENGGTTEGRVSRRKLVRQKPTLPELPEVALQEPIIITNNGFVQAVARNSTVFLPSNTVSLDRPYTCHVCNAAFRKLSHLKQHIRMHTGERPYKCNLCGRHFISNGVLKAHQRTHEGVKSYKCPECSNMFSTNGSLKRHMGTHSDLRPFMCPYCHKTFKTSVNCRKHIKTHKHELALQVAQQTVKEDGTNILNSIPVSGQGSAVVTESTNFPPEGLGPDFAQAFSDQPFQVTSTTEQQEQEESAFAQNTLVDTLTSGPLEDSTDPVTAPAMITHTLHADATGTITLPSLAGQHTLTQENIREIERTLNEQIFGTSANVTSDLVSVGGASSDLAARVEVVGSDSEVESTTTEDLARTLGAASSPSAQPDASTLGTLSEGPKDNGRNKNTAEPASNSSVFGTSFDSAGFDSCVFSAITLQSDTLELEGLGSGSAMTTNMASILPPPGDAMPEPGTAAASAPTCKSELLVMPPMDGPVAAAAAAAAAVAANEADKDKNYVPGRPFSADAPPGERPYKCKQCSRAFKKSYHLKEHARSHVGKNLSCTLCERKCTTFGALRAHMKTHDGTRDFGCDLCGCRFTTSGSLKRHMIVHSDERPLKCSICNATFRTDHLLRRHITLHEPRERKGKLVATNPLQPPRGRRRAAVIRLTAEETQVLAQQPLDNAATVSEKVLIASVAEKDRISELKDPEQQYNMEPIHPNQCKFCPKSFRKPSDLVRHIRIHTGERPYKCACCNKCFTVKSTLDSHLKTHGGQKLFACHVCGCLFSTKGSLKVHMRLHTGAKPFKCPLCEMRFRTSGHRKAHLMSHMKHVTGDSKLSSQLTISARRSKQVPGQQQEQESEVQNPATSTTSELVTDTMTHITLDPATLSSLMPGEPFNSSLLTATADGNHVVGNFQLQLTDGFQIAGVDPSGTVHSYTTQAVQLDEALLHQFQASNIIIQTTQSNSQAQNHVEEGNTLEDQQQQEVTVDAGAEVSTVRFEIHTDEHGQIINIQPAVLQEIASRNGGDITFDLTGGLDMDAVEGDRQPQTARFHVTDCRKDEQVLGPIGNQTSGGQKDKESGSTSDEYLLFHNCATCGKHFSKPSQLERHTRIHTGERPFACFLCAKTFNQKNALNTHLNSHTGERPFPCPYCHYSSTQKGNLKTHMRRAHRFSSLEVSTNSTVTVTTSTTSPSTSTRSLLKPKRQPTLTNLNSSVDLATGKSLDLEKVVGDLFPQMRNTTSTDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01567148;
90% Identity: -
80% Identity: -