Zpyr038264.2
Basic Information
- Insect
- Zeuzera pyrina
- Gene Symbol
- -
- Assembly
- GCA_907165235.1
- Location
- OU015644.1:5610162-5611655[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-11 1.2e-08 35.8 0.0 1 39 8 47 8 53 0.91
Sequence Information
- Coding Sequence
- atgtCAAAGAGAAAGTTGTGGGATCCTGAAGCAATGAAAAAAGCTGTTGAAGCTGTACGAACGAAAGAAATGGGTTATAAAAAGGCAGTTAAGTTATTTAATGTTCCAAGAGCTACTTTGAAAGATTACGTAAAAAAAACGGAAAAATCTATCGAAAATATAGTTTCTGGGAAAATGGGAAGAAAACCAGTTTTGCCGGTTGAATTAGAAAAGGAGTTAGTAAACTATTGCTTGCAAATGGAGAAGAATTACTATGGTGTCACCGCTTCCGATTTAAAACGAATGTCTTTCCAATTGgctattagaaataatattccACACCCATTTTCACAGACTAAAAAAAAGGCTGGCAAGAAATGGATGAAGCTGTTTATGGCACGCCATCCTGATTTGTCGTTTCGTAAACCAGAGTCATTATCACGAGCTCGTGTACAAGGTTTTACTGCAGAAAACGTTAAGAGTTTTTTTGGCATATTAAAAcctgaattacaaaaaattaacttcaatcccaataaaatatttaaagtggaCGAAACTGGAATTAGCACCGTTCAgcataaaattagaaaaatccTGACTGTGAAAGGTAAGAGAGAAGTTCATATATTGTCGTCTGCTGAAAGGGGAGCGTTAGTAACTATTGTGACTTGCATGTCAGCTCCTGGTCAGTTCATTCCTCCGTTAATGGTGTTTCCGAGAAAAAACATGAAAGTCGAACTCCTTGATGGAGCACCTCCAGGCACCATTGGCGGATGTCATCCGTCTGGTTGGATCCAGCCTGAGCTATTCGCAAAATGGCTGAGACATTTCGTGTCTATAGTAAAACCATCTAAAGAAGACCCCGTTTTGCTGGTGTTAGATGGTCATTACAGCCATACAAGAAATTTAGATGTAATAGACATTGCACGCGACAATGGTGTGTCTATAATCTGCCTTCCGCCTCATTCAACTGATCGTATGCAGCCTTTGGATGTCTCATTTATGTTTCCTTTAAAAACATTCTATGCCCAAGAAATAGAGAATTGGTTGACAAATCATCCAGGACGAATTGTTACTCACTACCAAGTTGGAGAAATATTTGGAAAAGCTTATGCAAAAGCCTGCAAAATCGATACGGCTGTAAATGGCTTCCGGAAAACAGGCATATTTCCAATTAACGAAAACATTTTCGTTGACTCACCAAATGCTCCTTCTTCAACCGAAGCAAACAACACAACATTTTTGGTAAATGATGTCTCTTTACCTTTAGACTCCATAAGGTCAAGACCAACAACACCAACTACATTACCACGACTAGGAAACTCTCTATCCCCGTTTATAGTTCCAGCTGATGTGCAGCCTATTCCAATCATTGAGCCACCTTCAACGTCAACTAGACGGGGCAAAGCCATGATAGTCACGGCTTCACCGCATaaacaagaaattataaatatagaaaagaaGCGGAAGGAAAAGAGCGAAAGGAAAGCAGGAAAAAAAGAGCTAGaaacgtaa
- Protein Sequence
- MSKRKLWDPEAMKKAVEAVRTKEMGYKKAVKLFNVPRATLKDYVKKTEKSIENIVSGKMGRKPVLPVELEKELVNYCLQMEKNYYGVTASDLKRMSFQLAIRNNIPHPFSQTKKKAGKKWMKLFMARHPDLSFRKPESLSRARVQGFTAENVKSFFGILKPELQKINFNPNKIFKVDETGISTVQHKIRKILTVKGKREVHILSSAERGALVTIVTCMSAPGQFIPPLMVFPRKNMKVELLDGAPPGTIGGCHPSGWIQPELFAKWLRHFVSIVKPSKEDPVLLVLDGHYSHTRNLDVIDIARDNGVSIICLPPHSTDRMQPLDVSFMFPLKTFYAQEIENWLTNHPGRIVTHYQVGEIFGKAYAKACKIDTAVNGFRKTGIFPINENIFVDSPNAPSSTEANNTTFLVNDVSLPLDSIRSRPTTPTTLPRLGNSLSPFIVPADVQPIPIIEPPSTSTRRGKAMIVTASPHKQEIINIEKKRKEKSERKAGKKELET*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00042561; iTF_00408390; iTF_00752011; iTF_00408370; iTF_00120419; iTF_01367651; iTF_00120420; iTF_00924540; iTF_00924541; iTF_00924542; iTF_00924543; iTF_01564528; iTF_00144500; iTF_00144499; iTF_00144503; iTF_00017272; iTF_00144502; iTF_01367640; iTF_00144507; iTF_00247999; iTF_01359651; iTF_00247125;
- 90% Identity
- iTF_01564528;
- 80% Identity
- -