Zcuc021099.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zeugodacus cucurbitae
Gene Symbol
lov
Assembly
GCA_028554725.2
Location
CM053023.1:10739515-10758397[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.5 9.6e+03 -2.5 0.1 33 45 6 18 6 18 0.84
2 2 1.7e-17 3e-14 53.5 0.0 2 44 863 905 862 906 0.94

Sequence Information

Coding Sequence
ATGTTAACGGAGCCGCTGCACATGGTTAAACGTCGTAAACTGTCTTTGTCACAATcgcaaacagcaacagcaacaacagcagcgtccATGGACAGCGCGACCGTTGCGACCACAACGCCGCCGAATACACCGCCCACACCACCGCCGCTCAACATGATGATGACCACAGCACGTaatcacagcagcaacaacaccagcgTTAGCAGCGGCAACAGCAATGTTGACACCAGCAAAGACTGCAACATGGACAACACAACGTGTACTTTGATTACCGCCAGCTCAGCACCCACGCTCACCACCACCGCAATGACCGGCTCCTTGCTGAGCACCAGCCAGCACACAGCCTCAACGAATAGCGCCACAGCAGCTGCTGTTGCGGCCGCCGCTGTTGCTGCGGTGGCGGCTGTGACCGCTGCAGGCGTCAATGCTACACCAGCAAACGCCAGCGCTAGCGCCGCAAACAGTAGCGGTGCTGTGCCCGATCACTACAGCCTGCGTTGGAATAACCATCAAAATCATATACTGCGCGCTTTCGATGCGCTCTTGCAGACCAAGACACTGGTGGATGTGACGCTGGTGTGCGCCGAGACGAGCATACATGCGCACAAAATGGTGTTGTCCGCGTGTTCGCCCTTCTTTCAACGCGTCTTCGCCGAAACGCCGTGCAAGCATCCCGTCATTGTGCTGAAGGACTTCCAGGGCTGGGTGGTGCAAGCGATCGTTGACTTCATGTATCGCGGTGAGATCAGTGTGCCACAGGAGCGACTGCAAACCTTGATACAAGCAGGCGAGTCACTGCAGGTGCGCGGTTTGGTCGAAAGCTCGGTGCCAGAGCACACACCCACACCAGCTGCTTCGCCGGATGATTTTGGCATGATCGATACGTCGTTGATGTCGCCCGAACTGGAACGCTGCTCGAGCTTCGATGAGGAATCGCCTTCAATGGTAACAGCTGGCTCAAAAGTTATATTGCCATCGCGGCTGTTTGGCTCGTCAGCGCGTCGGGAGCGTGAACGTGAGCGCAAACGTGAACGTGCACTTGAGCGCGAATTGGAACGAGACGCCGAAAGCGATCAGGACCTGCCACTCGATACGAGTATCAATTCAGATGTTTGTACGTCGCCTATGCCAAGACGTAAGCAGGCACGTCCACGTCGCCGCTCCGGCGATTTGTCACTCGAAATGTTGAATGAACCAGCTACGCCCGCAGCGGTGGAGAAGCCGCCACAAGCACAACCCCTGCCTTTAACACTGGATGAGAAGTTGGAGCAGGCTCATGCAGAGCACTTAGAGGCTTTGAAAACTGTGATCAAAACTGAGCTGGCTGAACCGATGGATGAAGATGAGGGTGCTCGTCGCGATGACAGTGGCAATGGCAATGACAGTCAGATGAACAACGAAACAGACGAGAAATCCATAAATGCGTATCAGTCGAGTGAAGATCAACAGCATATTTCGCGCACGGATGAAACACTTTCACCAGCACCATTGAATGCGTCGCTCTCCATGGACATCGAAGAGGAGGAGCAAGAAGATGAAAATGATAACGAACATGACAATGATAATGAAGTAATACCAGATGCCGAAGATATCGAAGAACTCATCAACGCCACCAATGAGTTGCGTCGCAAATCGTTATCAAATCTCTCGGACGGCCCAGAAGATCTCTGCACAACGAAGAAAGACCAAAATGATACAAACGGCAGTCAGTCGACTAACGACGCCGATAGCAGTCCGacgaataataataacaacaataataaactcaacaacaacaatcgcattGTATTGTCACTCAAAGATATAAGACAACTAAATAAACCCTCATCCTCCTCCACACCCAATTCAACGAATAGCATGCACCCTTTTGCGACGGCCAGCCTACGCGATCTGCGACTGGATCGTGCCGTCAGCTCCGCAGCGGAAAATCAATGCAAAATGGACGCACTGGAAGCACAAATGCATGCGGCCGCAGCAGCCGCGGTAGCAGCAGCAAACGGCGAGAATCCCTTTCAACATATGGAACATCAGATGGATCTGTCGCTAGCTGCCGCCGCAGCAGCCGCCGCTGTGTCACATCAACAGTCACGCGAACGTGATCAGGCATTACAGCGGGAGCAACGGGAATTGCAAGAACAGCATAATGCCTATGCGAATAGCATACTCGGGCAAATGGGTATGTCCGGCATGCCGCCTTTCGGTGGTCCCGGTGGACCAGCACCGCATGAACGTCTGGAGGAGAGTATGAATCGATTGAGCAAAGAATTTGCGCCGAGTTCACCTATGAGTCTGCCCACACACTTCAATCCACCTGATGGACCACCACATCCACCCTCTCCACTACCATTTCCGGGTATGTCTTCAGCGCTGACGCTGACGCCACCGCACATGTTCGGTTTGGACTCACCACTTGGTCTCTTCCCGCCAGGCATTGACCCTGGCAAACTCTATAACCCACTAATGGAAATGTCCGATCCACGTGGCATGCCCAGCGATCATCCACCGCCCTTTCTCAAAGGCAAGAAAATACCACGCCCAAAGGGACAACACTCGGCGCCACGCGGCGGTCCGCCACGTTCGTGGACGAACTCCGAGCTCACCGAGGCATTGCAGCATGTCTGGAATAAGAAAATGACCACCTCACAGGCGTCCCGCATCTTCGGCATACCCTACAACTCACTGCTGATGTATGTGCGCGGCAAATATGGCAAGAGCCTGAAACTGGAACAGCTGCGCAAGGACTGTATCAGCGGTCCACCACTTGAATTGCTACAACTGGGGCTTGGCGGCGGCACTGGTGGCGGTAAAAATAAAGATGGCAAAGACAAATCAGCACATCGCAACTCGGAGAATTCAACGAAAAATAATAACGAACTCGACTTGGGCATACCGTTGCCGGGTATGGTGCCCGGCGGTAATGGACCAAGTGGGCCACGTAGCGCCAGTTCCGAACCCGATTTAATTGGCGGACCCAACTCGCTATTTGGACCATTTCCCGGCGCTTTCTATCCCGACTTCCCCGGCGGCTTTCCTGGTCTGCCGCTAAGCATGCTCAATCTACTCCCACCCACGGATCGTCATCAGCCACATGGCGCTGGCATGACGGCGCTGCATCATCTCGGCATGGATGAGGACTGCAAATCGGATCGTTCGAAGCAATCCTCTTCACTTGGTGATGACGACTTCGCTGCCAGCGCAGCAGCATTAGCCGCCGGCGTACAACCGCTCGCGCTCAATCGCAACGAAAACGAACGACGCAGCGGCGGTGATATGCACGGAAATGCGGGTGcgccgccaccgccaccaccgcccATGAGCACTGCCGTCGGCGGTGGCGGCCAGCAAAATGGTGGTATGCAGGATTGA
Protein Sequence
MLTEPLHMVKRRKLSLSQSQTATATTAASMDSATVATTTPPNTPPTPPPLNMMMTTARNHSSNNTSVSSGNSNVDTSKDCNMDNTTCTLITASSAPTLTTTAMTGSLLSTSQHTASTNSATAAAVAAAAVAAVAAVTAAGVNATPANASASAANSSGAVPDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIHAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFQGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGMIDTSLMSPELERCSSFDEESPSMVTAGSKVILPSRLFGSSARRERERERKRERALERELERDAESDQDLPLDTSINSDVCTSPMPRRKQARPRRRSGDLSLEMLNEPATPAAVEKPPQAQPLPLTLDEKLEQAHAEHLEALKTVIKTELAEPMDEDEGARRDDSGNGNDSQMNNETDEKSINAYQSSEDQQHISRTDETLSPAPLNASLSMDIEEEEQEDENDNEHDNDNEVIPDAEDIEELINATNELRRKSLSNLSDGPEDLCTTKKDQNDTNGSQSTNDADSSPTNNNNNNNKLNNNNRIVLSLKDIRQLNKPSSSSTPNSTNSMHPFATASLRDLRLDRAVSSAAENQCKMDALEAQMHAAAAAAVAAANGENPFQHMEHQMDLSLAAAAAAAAVSHQQSRERDQALQREQRELQEQHNAYANSILGQMGMSGMPPFGGPGGPAPHERLEESMNRLSKEFAPSSPMSLPTHFNPPDGPPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMPSDHPPPFLKGKKIPRPKGQHSAPRGGPPRSWTNSELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQLGLGGGTGGGKNKDGKDKSAHRNSENSTKNNNELDLGIPLPGMVPGGNGPSGPRSASSEPDLIGGPNSLFGPFPGAFYPDFPGGFPGLPLSMLNLLPPTDRHQPHGAGMTALHHLGMDEDCKSDRSKQSSSLGDDDFAASAAALAAGVQPLALNRNENERRSGGDMHGNAGAPPPPPPPMSTAVGGGGQQNGGMQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01045392;
90% Identity
iTF_01563013; iTF_00190595; iTF_00190759; iTF_00191285; iTF_00191453; iTF_00189867; iTF_00190050; iTF_00193484; iTF_00193674; iTF_01563887; iTF_01563682; iTF_00192178; iTF_00192012;
80% Identity
iTF_01563013;