Nasi011600.1
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- lov
- Assembly
- GCA_030068015.2
- Location
- CM061527.1:59397928-59430219[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-17 1.7e-14 53.5 0.0 2 44 876 918 875 919 0.94
Sequence Information
- Coding Sequence
- ATGTTAATGGAACCAATGCACGGCGTTAAGAGACGCAAATCGTCGGTGTCGCAGTCCCACAACTCGGCATCTACGACAACAACACCAACGTCCATGGAAAACGCCTCAGTGGCCACGACCACACCACCAATCACACCGCCCACGCCACCGCTCAATATGATGATGACCACAGCTCGCAGTCacaacagcagtagcagcagcaccAGTAGTCTAATCGGCAACTGTAGCGCCAGCAATGCTTGCAACGTAGGTAACAACAACACCACGTGTACTTTGACTGCGGCTAGTTCAACGCCCACGCATACAACCAACACAATGAGCGGCTCATTATTGAGTGCCAGCCAACACACAGCCTCAGAAAGTAACGCTACGGCAGCAgcagctattgcggccgcgaCAGCTGCTGCGGTGGCTGCCGTGGCCGCTGCTGGCACTAATGCCTCCACAACGCCCGCCCTCATAACCACCGCGAACACCGTACAAGATCATTACAGCCTGCGTTGGAATAATCATCAGAATCACATATTGCGTGCATTCGATGCGCTCCTACAGACCAAAAATTTGGTGGATGTGACACTGGTGTGCGCTGAGACGAGCATACATGCGCACAAAATGGTGTTGTCGGCGTGTTCGCCTTTCTTTCAACGCGTCTTTGCTGAAACACCCTGCAAGCATCCTGTTATCGTTTTGAAGGACTTTCAGGGCTGGGTGGTGCAAGCGATTGTGGATTTCATGTATCGTGGTGAGATTAGTGTGCCACAGGAGCGACTACAAACACTCATACAAGCAGGCGAATCATTACAGGTGCGTGGTTTAGTTGAAAGCTCTGTGCCGGAACATACACCAACACCAGCTGCCTCGCCGGATGATTTTGGCATGATCGACACATCATTAATGTCGCCTGAACTGGAACGTTGCTCCAGTTTTGACGAAGAATCACCTTCGATGGTTACCGCAGGCTCAAAGGTTATACTACCATCAAGGCTTTTTGGCTCATCAGCACGGCGTGAGCGTGAACGTGAACGGAAACGCGAACGTGCACTCGAACGTGAGTTGGAGCGCGAAATAGAAAGCGACCAGGACCAGCCACTTGATACAAGCATCAACTCAGATATTTGCACATCACCTATGCCGAGACGCAAGCAAGCGCGCCCTCGGCGACGCTCCGGCGATCTGCCACTAGAAATGATAAACGAACCAGTTCCACCTGCGCCTGAAACCGCACCTATCGACGAATCACCACAACCTCAACCACTGCCTCTGACACTGGAGGAACAGCTGGAGAAAGTACAGGCTGATAGCATAGAGGCTTTGAAAACTGTGATCAAAACTGAGCTAGCCGAGCCCGTGGATGAAGATGAAGGTGCACATCGAGACGAAAGTGGCAGCGGTAATGAAAGCCACGACAACAACGAATCACAGGAAAAGTCGTCAAACGCATACCAATCGGGTGAGGGGCAGCAACAGACCTGTGGGATAAATGAGACACCATCACCCGTAGTACCCTTAAATGAAACCCACTCTATGGACATAGAAGACGAGGAGCAAGATGATGACAATGAAATCGAGCAAGAAAATGGTAATGACGATATTGAACCAATACCAGAAGCTGAAGACATTGAAGAGCTCATTAACGCCACCAATGAGTTGCGGCGCAAATCCTTGTCTAATCTATCGGACGGTCCAGAGGATCTCTGCACAACGAAGAAAGATCAAACCGAAACCGGGGCTAGCAATTCAGCGAACGACACTGAAAGCACACTGgcgaataataataacaacaataataaattgaacaataacAATCGAATTGTGTTGTCTCTGAAAGATATACGGCAACTGAACAAACCCTCATCCTCCTCCACACCCAATACGACGAATAACATGCACCCTTTTGCGACGGCCAGCCTACGCGATCTGCGCCTCGATCGTGCCGTCAGCACGGCGGCCGAAAATCAATGTAAAATAGACGCTTTGGAGGCGCAGATGCATGCCGCGGCAtcagcagcagcggcggcagcagcaaATGGCGAAAATCCATTTCAGCTCATGGAACATCAAATGGATTTGTCACTAGCGGCGGCCGCAGCAGCTGCCGCTGTCTCCCATCAACAGTCACGGGAACGTGATCAGGCATTACAACGGGAACAACGTGAATTCcaagaacaacaaaatgccTATGCGAATAGCATATTGGGCCAAATGGGCATGGCCGGTATGCCGCCATTCGGTCCACCTGGTGGTCACGGGGGACCAGCACCACATGAACGTTTGGAGGAGAGTATGAATCGATTAAGTAAAGAATTTGATCCGACCTCGCCCATGAGCCTGCCCTCGCACTACAATCCAACGGATGGACAACCACATCCATCCTCACCACTACCATTTCCGGGTATGTCATCAGCTTTGACGCTGACGCCACCGCACAtgtTTGGCCTAGACTCGCCACTCGGTCTCTTTCCGCCTGGCATTGACCCTGGCAAGCTTTATAATCCGCTAATGGAAATGTCCGATCCACGCGGCATGCCGAGCGATCATCCGCCGCCCTTTCTCAAAGgcaaaaaaataccCCGCCCAAAGGGACAACACTCTGCGCCACGTGGTGGTCCACCACGCTCTTGGACCAACTCTGAGCTCACCGAGGCGCTGCAGCATGTCTGGAACAAGAAGATGACCACCTCCCAGGCATCACGCATCTTCGGCATACCCTACAACTCACTGCTGATGTATGTACGTGGCAAGTATGGCAAGAGCTTGAAACTGGAGCAGCTGCGCAAAGACTGCATAAGTGGGCCACCGCTTGAACTGCTACAACTCGGTCtaggtggcggtggtggtggtggcaaaCATAAGGaaggtaaaaataaatcatCGGCTCATCAAAATGCAGATAATACAGCGAAAGGTAATGCTGAACTCGATTTGGGCATACCACTGCCGGGTATGGTGCCCGGCGGCAATGGCGCAAGCGGACCACGCAGCGCTAGCTCTGAACCGGATTTGCTCGGTGGCCCTAATTCGATATTCGGTCCATTCCCTGGCGCCTTCTACCCCGATTTCCCCGGCGGCTTTCCCGGTCTGCCGCTAAGCATGCTCAATCTGTTGCCACCTACCGATCGACATCAATCACACGGCTCTGGCCTGTCAGCGTTACACCACCTTGGCATGGATGAAGACTGTAAATCAGATCGCTCCAAACAATCTTCATCATTAGGCGATGACGATTTTGTCGCCAGTGCAGCATTAGGGGTACAACCACTCGCACTCAATCGTAGCGACAGCGAACGGCGCGGTAGCAGTGACATGATTGGGAATGCCGGTGCGTTAGGTGTGCCGCCACCGCCACTACCACCCATGAGCGCTGCCGTCGGTGGTGGTGCGCAGGAAAATGGCGGTATGCAAGATTGA
- Protein Sequence
- MLMEPMHGVKRRKSSVSQSHNSASTTTTPTSMENASVATTTPPITPPTPPLNMMMTTARSHNSSSSSTSSLIGNCSASNACNVGNNNTTCTLTAASSTPTHTTNTMSGSLLSASQHTASESNATAAAAIAAATAAAVAAVAAAGTNASTTPALITTANTVQDHYSLRWNNHQNHILRAFDALLQTKNLVDVTLVCAETSIHAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFQGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGMIDTSLMSPELERCSSFDEESPSMVTAGSKVILPSRLFGSSARRERERERKRERALERELEREIESDQDQPLDTSINSDICTSPMPRRKQARPRRRSGDLPLEMINEPVPPAPETAPIDESPQPQPLPLTLEEQLEKVQADSIEALKTVIKTELAEPVDEDEGAHRDESGSGNESHDNNESQEKSSNAYQSGEGQQQTCGINETPSPVVPLNETHSMDIEDEEQDDDNEIEQENGNDDIEPIPEAEDIEELINATNELRRKSLSNLSDGPEDLCTTKKDQTETGASNSANDTESTLANNNNNNNKLNNNNRIVLSLKDIRQLNKPSSSSTPNTTNNMHPFATASLRDLRLDRAVSTAAENQCKIDALEAQMHAAASAAAAAAANGENPFQLMEHQMDLSLAAAAAAAAVSHQQSRERDQALQREQREFQEQQNAYANSILGQMGMAGMPPFGPPGGHGGPAPHERLEESMNRLSKEFDPTSPMSLPSHYNPTDGQPHPSSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMPSDHPPPFLKGKKIPRPKGQHSAPRGGPPRSWTNSELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQLGLGGGGGGGKHKEGKNKSSAHQNADNTAKGNAELDLGIPLPGMVPGGNGASGPRSASSEPDLLGGPNSIFGPFPGAFYPDFPGGFPGLPLSMLNLLPPTDRHQSHGSGLSALHHLGMDEDCKSDRSKQSSSLGDDDFVASAALGVQPLALNRSDSERRGSSDMIGNAGALGVPPPPLPPMSAAVGGGAQENGGMQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01045578; iTF_00190595; iTF_00190050; iTF_00190759; iTF_00189867; iTF_00191285; iTF_00191453; iTF_00192012; iTF_00193674; iTF_00193484; iTF_00192178; iTF_01563887; iTF_01563682; iTF_01562816; iTF_01563013; iTF_00081353; iTF_00081123; iTF_00303739; iTF_00303894;
- 90% Identity
- iTF_01045578;
- 80% Identity
- iTF_01045578;