Basic Information

Gene Symbol
pnr
Assembly
GCA_012273895.1
Location
CM022613.1:10902402-10906448[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.6e-17 2e-13 49.5 3.3 1 35 450 483 450 484 0.97
2 2 6.2e-18 1.4e-14 53.2 7.5 1 35 511 544 511 545 0.97

Sequence Information

Coding Sequence
ATGGAGAACGTAATGAGAACAAATGACCACAGAGAGGAGGAAGCGAACGAAGCGCTGCAACTGGTTAAGAACGAGGAGAGACAGGAGATAGCGGCTAGTGAATGTAACCCTAACACTTCTATAGCTGTCTCCGGCCCTGAAGGGTCAGCAATAACCGTATCCGCGTCCAGCGGGGAGATGAGTGCGGAGCAGCACTCTGTCATAACGTCCCGCCGCACCCTGCGCACCATCACCACCGCCGGCCACATCACTGACGCTCCGGACATGAGCGACGAAGGCGTCAAAGACGAGCCGCCAGAGCCGCCACCGCTAGAACACGATATGCAATACAACGCGAAGCTGGAAGAGGAGCGTCAGAACACTAGTCACTACGACGAGGAGCGGTTGCGCGCCGCCGAGGCAGAGACGGCGCGGTATCTGGCTTTCAAACAAGAGCCATACAGGACGCTGCAGTCCCCAGCGCCGCAGCTGGATAAGCGATTGCAGCCACAGTATTCGCGGGGTCCGCCCCCGCGACCGGCGTACGGGCGCAGCCTGGCGCTGCGGTACGGCGCCCCGCACCACGTGATAGTGGCGCAGGAGGGGGAGGCCGAGGAGCAGGCGCACGAGGCGTACTTGCAGAAGGAAAAGAGCGACCAGCTGCAACAGGCGTACGCGGGTGAGGCGCAGGAGAGCCGCCAGTACACGGCCGTGCTCCCAGACCAGCCCGCCGCGCTAGAGATGATACAGACCACCTCGCTCAACAACCAGCAGGCCGTTGGTGTCGCCTATCAGCAGGTGAAATACGAGACGCGAGGAGAGACGGAGCCGCGGCCGAGCACTTACGCGAGCCTGCAGCCCGTGACGTCGGTGCAGGGCGGCTACACGTACGCCGGCCAGAGCCCGCAGTACGCGGCAGGCGGCTACAGCGCGTATGCGGGCGGCAAGGAGCTGCTCACGCTGtacggcgcgggcgcgggcgcggccgCGCGGGGCGAGGACTCGCCGCCCTCGCAGCTGCTCTACCGCGCCGATCCCACGCTCTCGTCCTCCTCGCTGAACGCGCGAGCGCACGTTGTCTATGGATCCGTGGTGCCGCAGTCACAAGCGGTCTATGAGGCCCCGCCGAGCCCCAATTCTCAGCAGGTGACGCTGTACACGCATGGCAACACGGTGCAGTACAAGGTGGGCGGCGAGCACTATCTGGGACAGGGCGGCGGCGTGGAGTACGTGCCGGTGTCGGGCTACGAGGGCGGCTTGCTGGTGGAGAGCTACGCGCCGCCCGCGCAGCCCTGGCCCGCGCACAACCTGCTGCCCATTGATGACGGTTTCGACCCCAGTATGGCTGGCATGGGCGAGGTGAAGGAGTGCGTGAACTGTGCGGCGGCCACCACCCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGCATCAACGGGGTCAACCGCCCGCCGCTTAAAGGGCAGAAAGCAAAGCCACAACAAGCGCTGCCAACCAATGGAAACAGGCGAGTTGGTGTGACGTGCGCCAACTGCAGAACCTCCAACACCACGCTGTGGCGCCGCAACAACAACGGCGAGCCCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACGTGAACCGGCCACTAAGCATGAAGAAGGACGGCATCCAGACGCGGAAGCGCAAGCCGAAGAGCATGGGCGGGCACGGCGGCGTGGCGCGGCCCGGCGCGCTGTCAGTGGAGGCACACTCCCTCTCGCACAAGGTGCTGCCTCCGCTGTACGCCGCCGTGGAGGGCGCCGCGCCGCTGCTGCTGCTGCCCGCCCGCTCCGACATGGTACCAGCGCTAGAGCGCGCCGCGCCGCAGTGCCGCGCGCCCTAA
Protein Sequence
MENVMRTNDHREEEANEALQLVKNEERQEIAASECNPNTSIAVSGPEGSAITVSASSGEMSAEQHSVITSRRTLRTITTAGHITDAPDMSDEGVKDEPPEPPPLEHDMQYNAKLEEERQNTSHYDEERLRAAEAETARYLAFKQEPYRTLQSPAPQLDKRLQPQYSRGPPPRPAYGRSLALRYGAPHHVIVAQEGEAEEQAHEAYLQKEKSDQLQQAYAGEAQESRQYTAVLPDQPAALEMIQTTSLNNQQAVGVAYQQVKYETRGETEPRPSTYASLQPVTSVQGGYTYAGQSPQYAAGGYSAYAGGKELLTLYGAGAGAAARGEDSPPSQLLYRADPTLSSSSLNARAHVVYGSVVPQSQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVESYAPPAQPWPAHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGHGGVARPGALSVEAHSLSHKVLPPLYAAVEGAAPLLLLPARSDMVPALERAAPQCRAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00359143;
80% Identity
-