Psen017852.1
Basic Information
- Insect
- Phoebis sennae
- Gene Symbol
- gata4
- Assembly
- GCA_001586405.1
- Location
- LQNK01000057.1:85632-89972[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-07 0.00026 20.6 0.5 14 35 467 487 466 488 0.90 2 2 2.1e-13 4.9e-10 38.9 8.5 1 33 515 545 515 548 0.89
Sequence Information
- Coding Sequence
- ATGGAGAACGTCATGACGAGACAGAACGATCCCAGAGAGGAGGAGGCGAATGAAGCGCTGCAATTAGTGAAGAATGAGGAAAGACAGGAGATAGCTACTAGTGAGTGTAACCCGAACACTTCCATGTCAGTGACGGGCGCGGAAGGCTCGGCCATCACCGTGTCGTCCGGCGGCGAGATGAGCGCGGAGCAGCACTCCGTCATCACGTCGCGGCGAACGCTGCGCACCATCACCACGGCCGGCCACATCACCGACGCGCCGGACATGAGCGACGAAGGCGTCAAGGACGAGCCGCCGGAGCCGCCGCCGCTGGAGCACGACCTGCAGTACAATGCCAAGATGGAAGAGGAACGCCAAAACACCAGCCACTACGACGAGGAGAGGTTACGTGCCGCCGAGGCTGAGACCGCGCGGTACCTGGCCTTCAAACAGGAGCCATACAGAACCTTACAGTCGCCAGCCCCACAGTTAGACAAGCGGTTGCAGCCGCAATATTCGCGAGGTCCTCCGCCGCGGCCGGCGTACGGAAGAAGCCTCGCGCTCCGGTACGGAGCTCCACACCACGTCATAGTGGCGCAGGAGGGCGAGGGGGAGGAACAAGCGCACGAGGCGTACTTGCAAAAGGAGAAGAGCGAGCAGCTGCAGCAGGCGTACGCGGGCGAGGCGCAGGAGGGCCGCCAGTACGCCGCCGTGCTGCCCGACCAGCCCGCGCTCGAGATGATACAGACCACCTCGCTCAACAACCAGCAGGCCGTCGGCGTTGCATATCAACAGGTGAAATACGAGAGCCGCGGGGAGACGGAGCCGCGGCCGAGCACGTACGCGAGCCTGCAGCCGGTGACGTCGGTGCAGGGCTACGCGTACGCCGGCCAGTCGCCGCAGTACGCGGGCGGCTACAGCGCGTACGGCGGCAAGGAGCTGCTGACGCTGTACGGCGCGGGCGCGGGCGGCGCGGGCGCGCGGGGGGAGGACTCGCCGCCGTCGCAGCTGCTGTACCGAGCCGACCCCACGCTGTCGTCGTCCTCGTTGAACGCCCGCGCGCACGTCGTATACGGCTCTGTGGTGCCGCAGTCGCAGGCCGTGTACGAAGCTCCACCTAGCCCTAACTCACAGCAGCAACAAGTGACGCTATACACGCACGGTAACACGGTGCAGTACAAGGTGGGCGGCGAGTACCTGGGTCAGGGCGGCGGCGTGGAGTACGTGCCGGTGTCGGGCTACGAGGGCGGCCTGCTGGTGGAGAGCTACGCGCCGCCCGCCCAGCCCTGGCCCGCGCACAACCTGCTGCCCATCGACGACGGCTTCGACCCCATTTTTAAAGCAACAATTGTCTTGTGTCAGGTATGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTGTACACGCGCATCAACGGCGTCAACCGCCCGCCGCTCAAGGGGCAGAAGGCCAAGCCGCAGCAAGCCCTGCCAACAAATGGGAACCGGCGGGTTGGAGTCACGTGCGCCAACTGCAGGACGTCCAACACCACGCTGTGGCGACGCAACAACAACGGCGAGCCTGTCTGCAACGCGTGCGGTCACTACAAGCTGCACAATGTAAACCGACCACTCAGCATGAAGAAGGACGGCATCCAGACCCGCAAGCGCAAGCCCAAGAGCATGGGCGGGCACAGCGGCGTGCGGCCGGGCGCGCTGTCAGCGGAGGGTCCGCTCCACAGGGTGCTGCCGCCGCTGTTCGCCGCCGTGGAGTCGCCGCTGCTGCTGCTGCCCGCGCGCGCCGCCGACACGGTACCAGCGCTAGAGCGCGCGCCCGCCGCCGCCGCCGGCGCCGCGCACTACCGGCCTCCCTAA
- Protein Sequence
- MENVMTRQNDPREEEANEALQLVKNEERQEIATSECNPNTSMSVTGAEGSAITVSSGGEMSAEQHSVITSRRTLRTITTAGHITDAPDMSDEGVKDEPPEPPPLEHDLQYNAKMEEERQNTSHYDEERLRAAEAETARYLAFKQEPYRTLQSPAPQLDKRLQPQYSRGPPPRPAYGRSLALRYGAPHHVIVAQEGEGEEQAHEAYLQKEKSEQLQQAYAGEAQEGRQYAAVLPDQPALEMIQTTSLNNQQAVGVAYQQVKYESRGETEPRPSTYASLQPVTSVQGYAYAGQSPQYAGGYSAYGGKELLTLYGAGAGGAGARGEDSPPSQLLYRADPTLSSSSLNARAHVVYGSVVPQSQAVYEAPPSPNSQQQQVTLYTHGNTVQYKVGGEYLGQGGGVEYVPVSGYEGGLLVESYAPPAQPWPAHNLLPIDDGFDPIFKATIVLCQVWXXXXXXXXXXXXXXXXXRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGHYKLHNVNRPLSMKKDGIQTRKRKPKSMGGHSGVRPGALSAEGPLHRVLPPLFAAVESPLLLLPARAADTVPALERAPAAAAGAAHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01562426;
- 90% Identity
- -
- 80% Identity
- -