Ccro008817.1
Basic Information
- Insect
- Colias croceus
- Gene Symbol
- pnr
- Assembly
- GCA_905220415.1
- Location
- HG991960.1:13148965-13159556[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9e-17 2.7e-13 49.7 3.3 1 35 450 483 450 484 0.97 2 2 6.5e-18 1.9e-14 53.3 7.5 1 35 511 544 511 545 0.97
Sequence Information
- Coding Sequence
- ATGGAGAACGTGATGAGAACAAATGACCACAGAGAGGAGGAAGCGAACGAAGCGCTGCAACTGGTTAAGAACGAGGAGAGACAAGAAATGGCAACTAGCGAATGTAACCCTAACACGTCCATAGCGGTCTCCGGTGCGGAAGGGTCAACGATCACCGTGTCGGCATCTAGCGGAGAGATGAGCGCGGAGCAGCACTCCGTCATCACGTCCCGCCGCACCCTGCGGACCATCACCACAGCCGGCCACATCACCGACGCGCCGGACATGAGCGACGAAGGCGTCAAGGACGAGCCGCCGGAGCCCCCGCCGCTCGAGCATGAGATGCAGTACAATGCTAAGCTGGAGGAGGAACGGCAGAACACAAGCCACTACGACGAGGAGCGCCTGCGCGCCGCTGAGGCGGAGACGGCGCGGTATCTGGCGTTCAAGCAGGAGCCGTACCGCTCGCTGCAGTCACCGGCGCCGCAGTTGGACAAGCGGCTGCAGCCACAATACGCGCGCGGGCCTCCGCCGCGGCCGGCGTACGGGCGCAGCCTGGCGCTGCGGTACGGCGCGCCGCACCACGTGATCGTGGCGCAGGAGGGTGAAGGCGAGGAGCAGGCGCACGAGGCGTATCTGCAGAAGGAGAAAAGCGAGCAGCTGCAGCAGTACGCGGGCGAGGCGCAAGAGAGCCGCCAGTACACCACCGTGCTGCCCGACCAGCCCGCCGCGCTCGAGATGATACAGACCACCTCGCTCAACAACCAGCAGGCCGTTGGCGTCGCCTATCAGCAGGTGAAATATGAGACGCGAGGGGAAACGGAGCCGCGGCCGAGCACGTACGCTAGCCTGCAGCCCGTGACGTCGGTGCAGGGAGGGTACACGTACGCGGGGCAGAGCCCGCAGTACGCGACGGGCGGATACAGCGCGTACGCGGGTGGCAAGGAGCTGCTCACGCTGTACGGCGCGGGTGCAAGCGCGGGCGCGAGGGGCGAGGACTCGCCGCCCTCGCAGCTGCTCTACCGTGCCGACCCCACGCTGTCCTCCTCCTCGCTCAACGCGCGCGCGCACGTCGTCTACGGCTCCGTCGTGCCGCAGTCGCAGGCGGTCTACGAGACGCCGCCGAGCCCCAATTCTCAACAGCAAGTGACGCTGTACACGCACGGCAACACGGTGCAGTACAAGGTGGGCGGCGAGCACTACCTGGGGCAGGGCGGCGGCGTGGAGTACGTGCCGGTGTCGGGCTACGAGGGCGGTCTGCTGGTGGAGAGCTACGCGCCGCCCGCGCAGCCCTGGCCCGCGCACAATCTGCTGCCCATCGACGACGGCTTCGACCCCAGTATGGCAGGCATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCGGCGGCCACCACCCCGCTGTGGCGGCGCGACGGCACAGGCCACTACCTGTGTAACGCGTGTGGCCTGTACACGCGCATCAACGGCGTTAACCGCCCGCCGCTCAAGGGGCAGAAGGCTAAGCCGCAACAAGCTCTGCCCACCAACGGCAATAGGCGCGTAGGAGTGACGTGCGCCAACTGCAGAACGTCCAACACGACACTGTGGCGCCGCAACAACAACGGCGAGCCCGTGTGCAACGCGTGCGGCCTGTACTACAAGCTGCACAACGTGAACCGGCCGCTGAGTATGAAGAAGGACGGCATCCAGACGCGCAAGCGCAAGCCGAAGAGCATGGGCGGGCACAGCGGCGTGGCGCGGCCCGGCGCGCTGTCAGGGTACCAGCGCTAG
- Protein Sequence
- MENVMRTNDHREEEANEALQLVKNEERQEMATSECNPNTSIAVSGAEGSTITVSASSGEMSAEQHSVITSRRTLRTITTAGHITDAPDMSDEGVKDEPPEPPPLEHEMQYNAKLEEERQNTSHYDEERLRAAEAETARYLAFKQEPYRSLQSPAPQLDKRLQPQYARGPPPRPAYGRSLALRYGAPHHVIVAQEGEGEEQAHEAYLQKEKSEQLQQYAGEAQESRQYTTVLPDQPAALEMIQTTSLNNQQAVGVAYQQVKYETRGETEPRPSTYASLQPVTSVQGGYTYAGQSPQYATGGYSAYAGGKELLTLYGAGASAGARGEDSPPSQLLYRADPTLSSSSLNARAHVVYGSVVPQSQAVYETPPSPNSQQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVESYAPPAQPWPAHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGHSGVARPGALSGYQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01562426;
- 90% Identity
- iTF_00358187; iTF_01562426;
- 80% Identity
- -