Zces004288.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- -
- Assembly
- GCA_012273895.1
- Location
- CM022605.1:2849445-2851638[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-08 3.9e-05 23.1 0.0 3 39 17 53 15 57 0.86
Sequence Information
- Coding Sequence
- aTGCCGAAAGTACGCGTCAGGACAACTGAAAAGGCTTCCTGGTCTTCTGATAGCCTAAATAAAGCTATACAGCTCATTGATGGCGGTTCTTCTATAAGAAATGCTGCTAAAGTAATGGGAATCCCTTTTTCAAGCCTTCAGAAGAGGATAAAAAAAGGTTCTACCTTAGCACCACATTTAGGACGATTCACTGTCTTTAGTCGTGAGGAAGAAGCCGAGCTAGCGAACTTGGTGAAGAAAATggcaaatattttctatggtTGCACTGTTAATCAAATCAGAAGAGTCGCTTTCGAATATgctgaaaaattaaatgtgaagcataattttaatcaagcTTCAAAAATGGCTGGACGGGATTGGTTGCGTGCTTTTATGGCTAGAAATAACATTTCTATTAGAAAACCGGAAGCGACCAGCATAAATAGAATCACGgtctttaataaaacagaGGTAAGTCTGTTCTTTGAGTTACTTGGGCAGCTGATGGAAAAACACAAATTcgttgcaaaaaatatttacaattgcgATGAAACCGGTATTTCAACGGTTCAAACACCGGGAAAAATTTTAGCTGCAAAAGGACAGAAGAGAGTAGGATCTATTACCAGTTGGGAGAGAGGAAAAAACATAACCTTGTTGTGTGCTATGAGCAGTGCTGGGGGGTACATTCCACCTATGTTTATCTTCCCTAGAAAAAGGATGACTCCACTACTTGAGAAGGATGGTCCAGCAGGCGCGCTTTACAAATGTTCAGACAACGGTTGGATCAACGAGCATCTCTTTCTTGAATGGTTGGCGCATTTTAAACAGCACGCTAAACCGTCTGCAGATGAACCCATCCTTTTAATATTAGACAACCATGCTAGCCACATTTCTCTTTCCGTCTACGAATACTGCAAGTCCAATCACATTCATATGTTGTCTCTGCCACCACACACGTCTCATAGAATGCAGCCCCTTGACGTTTCTTTTTTTGGCCCACTTAAAATGGCTTACAAAAAAGAATGTGacttgtttttaaaaagtCATCTAGCAGAAAAGATAACCCCTTACGACGTAGCATCCTTGGTGAGGAAAGCATTTAATAATGTTGCTTCTATTAGTAAAGGAGAATCGGGGTTTAGATCAACTGGAATATTTCCACTAAATCCGGAGATATTCACTGAAGAAGATTTTCTCGCTGCAGAAACTCTCCAATCTGAGACCGTTGTAATCCAAGACTGCAATGAATCTCTCGCAGCTGCCTGTGTGATTCCCAGCACATCAAAAGAAGACTCACTAGTTCCAAGCACGTCAACACAAATTGTTTCACTAGATCTTATGATGTCTAACCAAGAAGTCCCACTTGATTCTGAATCTGATGTTGTTCCACAAGTTCCTGGCACGCCTAATCAATGTAGTGTATTgcatgatttaataaaaatgccaGAGAAAGCATCTGTTATTAAAACAAGACTGGGCCGAAAGAAGCAACACGCTACAATTTTAACTTCAACGCCACTAAAAGAAAATCTGTtagaaaaggaaaataataaaatgaagaaaaaaggAGGTAAAGAAAAAGAGAAGACATGGAAAGGCAAAGGACAAGGAAAAAAGACCAAAGTACAGAAGAAGGGTCCTGAAAAGGCAAAGCGCCAAGTATTACAAGAACAGAACGAAACTTCTATATCAGATGTTGGCACTGATGACTTATGCCAGGACGATGAGGATGATGACGCAGAAGATGCTAGAAACAGATGCCTAGTATGCGACGAATTCGGAAGAAATAACGAGATGTGGTACAGGTGTACCTCGTGTGGACTATGGGCTCACGCGGAGTGCACTGGATGGGAGTCAGCTGAAGGTTATGTTTGCGACGTatgctaa
- Protein Sequence
- MPKVRVRTTEKASWSSDSLNKAIQLIDGGSSIRNAAKVMGIPFSSLQKRIKKGSTLAPHLGRFTVFSREEEAELANLVKKMANIFYGCTVNQIRRVAFEYAEKLNVKHNFNQASKMAGRDWLRAFMARNNISIRKPEATSINRITVFNKTEVSLFFELLGQLMEKHKFVAKNIYNCDETGISTVQTPGKILAAKGQKRVGSITSWERGKNITLLCAMSSAGGYIPPMFIFPRKRMTPLLEKDGPAGALYKCSDNGWINEHLFLEWLAHFKQHAKPSADEPILLILDNHASHISLSVYEYCKSNHIHMLSLPPHTSHRMQPLDVSFFGPLKMAYKKECDLFLKSHLAEKITPYDVASLVRKAFNNVASISKGESGFRSTGIFPLNPEIFTEEDFLAAETLQSETVVIQDCNESLAAACVIPSTSKEDSLVPSTSTQIVSLDLMMSNQEVPLDSESDVVPQVPGTPNQCSVLHDLIKMPEKASVIKTRLGRKKQHATILTSTPLKENLLEKENNKMKKKGGKEKEKTWKGKGQGKKTKVQKKGPEKAKRQVLQEQNETSISDVGTDDLCQDDEDDDAEDARNRCLVCDEFGRNNEMWYRCTSCGLWAHAECTGWESAEGYVCDVC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00276324; iTF_00720230; iTF_00720231; iTF_00720232; iTF_01028233; iTF_01090697; iTF_00282286; iTF_00290640; iTF_00125077; iTF_00125078; iTF_00038711; iTF_00717716; iTF_00717717; iTF_00720216; iTF_00967968; iTF_00786722; iTF_00786721; iTF_00786723; iTF_01248070; iTF_00786711; iTF_01248058; iTF_01248059; iTF_01248060; iTF_01248061; iTF_00786720; iTF_00794512; iTF_00695477; iTF_01317237;
- 90% Identity
- iTF_00786721;
- 80% Identity
- -