Basic Information

Insect: Euzophera pinguis
Gene Symbol: -
Assembly: GCA_947363495.1
Location: OX376168.1:7342990-7344861[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.6e-07 0.00011 22.4 0.0 3 39 17 53 15 57 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.6e-07	0.00011	22.4	0.0	3	39	17	53	15	57	0.86

Sequence Information

Coding Sequence: atgccgaaagtacgcgtcaggacaactgaaaaggcttcctggtCTTCTGATAGCCTAAATAAAGCTATACGGCTCATTGATGGCGGTTCTTCTATAAGAAATGCTGCTAAAGTAATGGGAATCCCTTTTTCAAGCCTTCAGAAGAGGATAAAAAAAGGTTCTACCTTAGCACCACATCTAGGACGATTCACTGTCTTTAGTCGTGAGCAAGAAGCCGAGCTAGCGAACTTGGTGAAGAAAATGGCAAATATTTTCTATGGTTGTACTGCTAATCAAATCAGAAGAGTCGCTTTCGAATATGCTGAAAAATTAAATGTGAAGCATAATTTTAATCAAGCTTCAAAAATGGCTGGACGCGATTGGTTGCATGCTTTTATGGCTAGAAATAACATTTCTATTAGAAAACCGGAAGCGACCAGCATAAATAGAATTACGGCCTTTAATAAAACAGAGGTAAGTCTGTTCTTTGAGCTACTTGGGCAGCTGATGGAAAAACACAAATTCGTCCAAAAAAATATTTATAATTGCGATGAAACCGGTATTTCAACGGTTCAAACACCGGGAAAAATTTTAGCTGCAAAAGGACAGAAGAGAGTGGGATCTCTTACCAGTTGGGAGAGAGGAAAAAACATCACCTTGTTGTGTGCTATGAGCAGTGCTGGGGGGTACATTCCACCTATGTTTATCTTCCCTAGAAAAAGGATGACTCCACTACTTGAGAAGGATGGTCCAGCAGGCGCGCTTTACAAATGTTCAGACAACGGATGGATCAACGAGCATCTCTTTCTTGAATGGTTGGCGCATTTTAAACAGCACGCTAAACCGTCTGCAGATGAACCCATCCTTTTAATACTAGACAACCATGCTAGTCACATTTCTCTTTCCGTCTACGAATATTGCAAGTCCAATCACATTCATATGTTGTCTCTGCCACCACACACGTCTCATAGAATGCAGCCTCTTGACGTTTCTTTTTTTGGCCCACTCAAAATGGCATACAAAAAAGAATGTGACTTGTTTTTGAAAAGCCATCTAGCAAAAAAGATAACCCCTTACGACGTAGCGTCCTTGGTGAGGAAAGCATTTAATAATGTTGCTTCTATTAGTAAAGGAGAATCGGGGTTTAGATCAACTGGAATATTTCCACTAAATCCGGAGGTATTCACAGAAGAAGATTTTCTCGCTGCAGAAACTCTCCAATCTGAGACCGTTGTAATCGAAGACTGCAATGAATCTCTCGCAGCTGCCTGTGTGATTCCCAGTACATCAAAAGAAGACTCGCCAGTTCCGAGCACGTCAACACAAATTGTTTCACTACATCTTATGATGTCTAACCAAGAAgtcccacttgattctgaatcagatgttgtaccacaagttcctggcacgcctaatcaatctagtgtattgcatgatttaataaaaatgcccgagaaagcatctgttattaaaacaagacagggccgaaagaagcaacacgctacaattttaacttcaacgccacaaaaagaaaatctgttagaaaaggaaattaataaaatgaagaaaaaaggaggtaaagaaaaagagaaaacatggaaaggtagaggacaaggaaaaaagactaaagtacagaagaagggtcctgaaaaggcaaagcgccaagtattacaagaacagaacgaaacttctgtatcagatgttggcactgacgacttatgccaggacgatgaggatgatgacgcagaagatgctgggaacagatgcctagtatgcgacgaattcggaagaaacaacgagatgtggtacaggtgtacctcgtgtggactatgggctcacgcggagtgcactggatgggagtcagctgaaggttatgtttgcgacgtatgctag
Protein Sequence: MPKVRVRTTEKASWSSDSLNKAIRLIDGGSSIRNAAKVMGIPFSSLQKRIKKGSTLAPHLGRFTVFSREQEAELANLVKKMANIFYGCTANQIRRVAFEYAEKLNVKHNFNQASKMAGRDWLHAFMARNNISIRKPEATSINRITAFNKTEVSLFFELLGQLMEKHKFVQKNIYNCDETGISTVQTPGKILAAKGQKRVGSLTSWERGKNITLLCAMSSAGGYIPPMFIFPRKRMTPLLEKDGPAGALYKCSDNGWINEHLFLEWLAHFKQHAKPSADEPILLILDNHASHISLSVYEYCKSNHIHMLSLPPHTSHRMQPLDVSFFGPLKMAYKKECDLFLKSHLAKKITPYDVASLVRKAFNNVASISKGESGFRSTGIFPLNPEVFTEEDFLAAETLQSETVVIEDCNESLAAACVIPSTSKEDSPVPSTSTQIVSLHLMMSNQEVPLDSESDVVPQVPGTPNQSSVLHDLIKMPEKASVIKTRQGRKKQHATILTSTPQKENLLEKEINKMKKKGGKEKEKTWKGRGQGKKTKVQKKGPEKAKRQVLQEQNETSVSDVGTDDLCQDDEDDDAEDAGNRCLVCDEFGRNNEMWYRCTSCGLWAHAECTGWESAEGYVCDVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01561953;
90% Identity: iTF_00786721;
80% Identity: iTF_00720231;