Basic Information

Gene Symbol
XBP1
Assembly
GCA_012273895.1
Location
CM022622.1:8900237-8901500[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4e-17 3.4e-14 52.4 10.0 2 62 44 104 44 107 0.94
2 2 3.8e-05 0.032 14.1 1.2 32 55 88 111 86 116 0.90

Sequence Information

Coding Sequence
ATGAGCGTACCGATTATAATCACTGTTCCCAATGGCTACTTGGAGGTGGAAGATGGGGATTCACCGGTCGTGGTTGACTCGGCTCCAACTACACCTTCAAGGAAGCGAAGGCTCGACCACCTGACATGGGAAGAGAAGATGCAACGAAAGAAGCTGAAGAACCGCGTCGCGGCGCAAACATCGCGGGACCGTAAGAAGGCGAAAATGGATGAGATGGAGAGCAAAATAAACCACTTCATGGAGGTGAACGAGATGCTTGTCAAGGAGGTGGAGGAATTGAAGGCGATGAACAAGCGTTTGTTGAGCGAGAACGCAACGTTGAGAAGCGAGGCGGCGGCGCGGACCGTCGCGGAAGCCCCGGGACCGGCAGAGTCTCATCCTCAGCAGAAGGAGGGGCTTCCGTCGGCGATCCGCGCGGCGCGCCTGCTTCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACCTCGAGTCTGACGAATACCTCGATACCCTCCATCAACTTGCAGACTCCCTCCTCAAAGAGATTGATGCAGGTGCTACAGGAACGCCTGAAGATAACTCAATCAGggaaaatagaaaatgtacTGAAGGACCTGAAATGGTGGGGTCCGCAGCAAAGCACATGGAATCCAGTGAAAGTAGAGTCCTAG
Protein Sequence
MSVPIIITVPNGYLEVEDGDSPVVVDSAPTTPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESKINHFMEVNEMLVKEVEELKAMNKRLLSENATLRSEAAARTVAEAPGPAESHPQQKEGLPSAIRAARLLLAMCLLSQTSSHTSSLTNTSIPSINLQTPSSKRLMQVLQERLKITQSGKIENVLKDLKWWGPQQSTWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00875896;
90% Identity
iTF_00358260;
80% Identity
-