Ccro002010.1
Basic Information
- Insect
- Colias croceus
- Gene Symbol
- XBP1
- Assembly
- GCA_905220415.1
- Location
- HG991962.1:2577050-2579795[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-17 2.8e-14 53.2 5.9 2 52 44 94 44 96 0.97 2 2 1.4e-05 0.015 15.7 1.1 30 55 86 111 85 116 0.90
Sequence Information
- Coding Sequence
- ATGAGCGTACCGATAATAATCACTGTTCCCAATGGCTACTTGGAGGTGGAAGATGGAGATTCTCCGGTCGTGGTCGACTCGGCTCCAACTACACCTTCAAGGAAGCGAAGGCTCGACCACCTCACATGGGAAGAGAAGATGCAACGCAAGAAGCTGAAGAACCGCGTCGCCGCGCAAACATCGCGGGACCGGAAGAAGGCGAAAATGGATGAAATGGAGAGCAAGATAAACCACTTCATGGAGGTGAACGAGATGCTCGTCAAGGAGGTGGAGGAATTAAAAGCGATGAACAAGCGTTTGTTGAGCGAGAACGCATCGTTGAGAAGCGAGGCGGCGGCGCGGACCGTCGCGGAAGCCCCGGGACCAGCAGAGTCTCATCCTCAGCAGAAGGAGGGGCTTCCGTCGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACCTCGAGTCTGACGAGTACCTCGATACCCTCCATCAACTTGCAGACTCCCTCCTCAAAGAGATTGATGCAGGTGCTGCAGGAGCGCCTGAAGATAACTCAGTCAGGGAAAATAGAAAATGTACTGAAGGACCTGAAGTGGTGGGGTCCGCAGCAAAGCACATGGAATCCAGTGAAAGTAGAGTCCTAG
- Protein Sequence
- MSVPIIITVPNGYLEVEDGDSPVVVDSAPTTPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESKINHFMEVNEMLVKEVEELKAMNKRLLSENASLRSEAAARTVAEAPGPAESHPQQKEGLPSAIRAARLLLAMCLLSQTSSHTSSLTSTSIPSINLQTPSSKRLMQVLQERLKITQSGKIENVLKDLKWWGPQQSTWNPVKVES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00875896;
- 90% Identity
- iTF_01561763; iTF_00357157; iTF_01193357;
- 80% Identity
- -