Lsin003217.1
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- Xbp1
- Assembly
- GCA_905404315.1
- Location
- FR990154.1:31905944-31907203[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-17 4.5e-14 53.3 10.9 2 62 44 104 44 107 0.94 2 2 8.7e-05 0.17 13.1 1.4 32 55 88 111 88 116 0.91
Sequence Information
- Coding Sequence
- ATGAGCGCACCGATTATTATCACCGTACCTAACAACTACTTGAGGGTGGACAATGGGGATTCCCAGGTCGTCGTGGATGTTTCCCCAGCTCCACCTTCAAGGAAGCGACGGCTCGACCACTTGTCGTGGGAAGAGAAGATGCAGCGAAAGAAGTTGAAAAACCGAGTCGCGGCGCAGACTTCCCGTGATCGCAAAAAAGCCAGGATGGACGAGATGGAGACCAAGATACAACAGTTTATGGATGTCAATGATCGTTTGATTAAAGAGGTGGAGAATTTGAAAGCTATGAATGAGCGTTTGTTGAGTGAAAATGCAACACTACGCAGTGAAGCAGCGGCGCGGACCGTCGCGGAAGCCCCGAGACCAGCGGCGTCTCGACCTCAGCAGAAGGAGGGGCCTCCGTCGGCGATCCACGCGGCTCGCCTGCTGGTAGCGATGTGTCTTCTCTCACAGACATCCTCGCACACCTCGAGTCTGATGAATACCTTGACACCCTCCATCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAGGTTCTTCAGAATCGCCTAAAGATGAATCAGTCTGGCAAAATAGAGAATGCTCTGAAGCAGCTGAAGTGGTGGGGACCACATCAAAGCATGTGGAATCCAGTGGAAGTGCAATCGTAG
- Protein Sequence
- MSAPIIITVPNNYLRVDNGDSQVVVDVSPAPPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKARMDEMETKIQQFMDVNDRLIKEVENLKAMNERLLSENATLRSEAAARTVAEAPRPAASRPQQKEGPPSAIHAARLLVAMCLLSQTSSHTSSLMNTLTPSINLQTPSSKKLMQVLQNRLKMNQSGKIENALKQLKWWGPHQSMWNPVEVQS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01193357; iTF_01561763; iTF_00357157; iTF_00358260; iTF_00710778; iTF_00709923;
- 90% Identity
- -
- 80% Identity
- -