Zhep003847.2
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- bab1
- Assembly
- GCA_949319315.1
- Location
- OX439379.1:26289652-26297681[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-18 1.4e-14 53.9 0.0 1 43 53 96 53 98 0.95 2 2 2.5 3.8e+03 -1.9 1.2 6 15 200 209 198 212 0.86
Sequence Information
- Coding Sequence
- atgcaatattatttgcgtctcaagcttctgaatacctcgctacgctcagACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACGAATCAGAGTCTCGTGCACAACCTGCGCTTCCGTGAGCGCGGCCCTCTGAAGTCCTGGCGGCCTGAGACCATGGCTGAGGCCATCTTCTCAGTCCTGAAGGAGGGATTGTCGCTATCGCAGGCCGCTAGGAAGTACGACATCCCATACCCGACGTTCGTGCTCTACGCCAACCGGGTCCACAACATGCTCGGGCCCAGCGCCGACGGCGGAGCAGATTTGAGGCCAAAGGGGCGCGGGCGGCCGCAGCGCATCCTGCTGGGCGTGTGGCCCGACGAACACATCCGCGGGGTCATCCGCGCCGTGGTGTTCCGCGACACGCATGCGCCGCACGTGCCGCACGCGCCGCACGCGCAGCATGTGCCGCACCACATCAAGGAGGAGTCCATGCCCGTCTACCCCGCGATCACGGACGGCAGCGGCATCGGCGTACCGACCGCGTACGGCGCGGCGCCGTGCGGCAACGGACGCGACGGCGGCGTGTCGCccagcgcggcggcggcggcggccgtgGCGGCCGTGGCGCACGGTCTGCGCCGCCAGATGTGCAGCATGGTAGCGGCGCAGCGGCCCGCGGAGCACCCGCCGCACCTGGCGCTGCCGCCGCTGCCCTCGCCGCTCACCGCCGGGCTGGAGTCACCGCTgtgctcgccgccgccgccgggtcACGCGCTCGAGCCGCCAAAGCCGACCGACCCCTTCCGCCCCTTCGCCTCGCCCCGCCCCGACAGTCGATACTCCGACCGCGACCTCCTCGAGCAGCCCGAGATGGGCCCCCCTAAGACCCCGCTCGGCATCGCCAAGAACGGCAAGGAGCAGCTGTCGAGCCCGGTGCCGGTGAAGCTGGAGCCGCCGGCGGGCGAGGCGCGCGCGGAGCACATCTGA
- Protein Sequence
- MQYYLRLKLLNTSLRSDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPHVPHAPHAQHVPHHIKEESMPVYPAITDGSGIGVPTAYGAAPCGNGRDGGVSPSAAAAAAVAAVAHGLRRQMCSMVAAQRPAEHPPHLALPPLPSPLTAGLESPLCSPPPPGHALEPPKPTDPFRPFASPRPDSRYSDRDLLEQPEMGPPKTPLGIAKNGKEQLSSPVPVKLEPPAGEARAEHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00162430; iTF_01542879; iTF_01546563; iTF_01543814; iTF_01545678; iTF_01544799;
- 90% Identity
- iTF_01542879; iTF_01546563; iTF_01543814; iTF_01545678; iTF_01544799;
- 80% Identity
- -