Zvit009023.1
Basic Information
- Insect
- Zaprionus vittiger
- Gene Symbol
- lrrfip2
- Assembly
- GCA_018904025.1
- Location
- JAEIFQ010001075.1:20112-24363[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-115 7.1e-111 370.1 24.5 1 299 30 321 30 322 0.98 2 2 0.019 3.1e+02 0.3 3.1 220 251 350 374 324 395 0.53
Sequence Information
- Coding Sequence
- ATGGATATCACTAGTTCTACTGGTCGAAGACGGAACAATGTATGTGTTAACGCTGAAGATAATGCTCTCAATCAAATAACTAAGGAGGCTGAAGCGCGGCTAGCAGCTCGTCGTCAAGCTCGGGCGGAAGCTCGTGAAATTCGTATGCGAGAACTGGACAGGCAGCAAAAAGAACAGGAGCAAAACGCTGATCGCGCGTTTGACATGCATAGTACTAGTGGTGGCATTATTACCGACACGGTACCATCACATCCCACACGTCTAGCCCATGGAGGTATTACAAGCTTAACACGTTCGGCAGCTTCGCGTCGCAGCAGCGAAGATTCCTTAGAAGAAGAAGGCCGAAGTTTGCGCGACATCAAACATGAGCTTAAGGAAGTTGAGGAACGCTTTCGAAAGGCAATGATAACAAATGCACAGCTTGACAATGACCGATCATCACAAACATACGAAGTTAAACTACTTAAAGATAAAAATGAAACAATTCAAGAGTCTTTCGCTCAACTTCAGCGTGAGCTTAAAAATAAGTTTCGAGATTGTAATGCCCTTAAACGTAACTTGGACCGCACAACACTCGAATTGAATTTGCTGCAAGGTCAATTAAACGAACGGGATGCGCTAATTGCTGAGCAAGGTCTAGTTATAGTTGCCATTGAAAATAGTGATGGGAGTGATGCCAAACGGGCTTTAGTCAGTATTGAAAACTCTAATATTTTGGCGACCGTGCAAGGCTCACTTGATGTAAGACTTAAGAAATTTACTGAAGAAAAACAGAGTCTTTTAATGGAAGTGCAGAAACTTCAGGAAGAGTTAAATTTATATAAAACTGAGGGAAGGCTGGGCAGAGGTATGTCACTCAACGGCTCGTGGGGGTCGGACGATGATTATGAGATACAAAGAGAAGCCAATAAAACCATATCAGATTATAAATACAAACTGCAAAAGTCTGAGCAGGAAATCGCTAGTCTCCAAGCAAGTTTGGCACGATCGGAGACGCAAGTAATACGGTACAAAAGCACGGCAGAAGCAGCAGAGAAAGCAGAGGCAGAACTTAAAGTGGAAAGGCGTAAGCTGCAACGTGAGCACAGAGAAATCATGGAACGTCTGGAAGAAGCAGAAACTGCAAATAACCATTTACTTAAACGGCTTGATAAGCTTAAAAATGCGAAGAGCGCAATTTTAAAAGATTTATGA
- Protein Sequence
- MDITSSTGRRRNNVCVNAEDNALNQITKEAEARLAARRQARAEAREIRMRELDRQQKEQEQNADRAFDMHSTSGGIITDTVPSHPTRLAHGGITSLTRSAASRRSSEDSLEEEGRSLRDIKHELKEVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKNETIQESFAQLQRELKNKFRDCNALKRNLDRTTLELNLLQGQLNERDALIAEQGLVIVAIENSDGSDAKRALVSIENSNILATVQGSLDVRLKKFTEEKQSLLMEVQKLQEELNLYKTEGRLGRGMSLNGSWGSDDDYEIQREANKTISDYKYKLQKSEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKVERRKLQREHREIMERLEEAETANNHLLKRLDKLKNAKSAILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01554690;
- 90% Identity
- -
- 80% Identity
- -