Ztar007492.1
Basic Information
- Insect
- Zaprionus taronus
- Gene Symbol
- -
- Assembly
- GCA_018901805.1
- Location
- JAEIFH010000387.1:3326986-3331881[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0081 0.58 10.7 0.1 3 23 151 171 150 171 0.99 2 13 2.7e-05 0.0019 18.5 0.4 1 23 395 417 395 417 0.99 3 13 0.97 70 4.1 1.4 1 23 472 495 472 495 0.93 4 13 0.85 61 4.3 0.4 9 23 628 642 627 642 0.93 5 13 0.039 2.8 8.5 1.4 1 23 648 671 648 671 0.98 6 13 0.96 69 4.1 1.6 3 23 709 729 707 730 0.87 7 13 0.0043 0.31 11.5 1.9 1 23 751 774 751 774 0.97 8 13 0.018 1.3 9.6 0.8 1 23 1005 1028 1005 1028 0.90 9 13 0.0064 0.46 11.0 6.0 1 23 1041 1063 1041 1063 0.98 10 13 0.00091 0.065 13.6 0.1 2 23 1070 1092 1069 1092 0.89 11 13 0.0006 0.043 14.2 4.1 2 23 1099 1123 1098 1123 0.90 12 13 0.0015 0.11 13.0 0.6 1 23 1128 1150 1128 1150 0.98 13 13 0.0051 0.37 11.3 1.3 1 23 1156 1179 1156 1179 0.96
Sequence Information
- Coding Sequence
- ATGGCGTACAAGCGGCAAAAAACAGAGGACATTGATGTTAATTTTAAGTTTGCGTGTCGCTGTTGTCTCAAATCTGAGACGGAACTGTTAAAGCTGGACGTGCCTACAGAGAGCAGCCTGGACGACAATGATGGCTCATCCACAAAAGTGCCCCTTATACGGTTTCTATTGTTCTGTATGCGCACTGAGAATATGCCCGAGCTGCCGCAAGTGATTTGCATTGAATGCAGTAAAAGTCTGAAAATCGCCTACTTTTTCATACAAAACTCTCTCAAGGCACACGAAATACTGTGTCGCAAACTCTGTCCGGGCAAGACGAAGACTTCAGCGCATTTCAATGGCCAACAGCAGCAGCAGACCCAGTCTCTTTCCGATAGATTTGAGGGAGATGACGCGACAGTTGGCACAAATCACAGAGCAAAGCAACAGAGGTCTGGTGTGCGACACGGATGCAAAATCTGCGGCGCTATCATCTATAATCGTCTGGAGCTGAAGCAGCACATACGCATGCATGCAGAGCAATCACGGCATTCGTGCAAATTGTGCAGCTATGTGACACTTAAACTACATCAGCTTCCGGAGCATTATCGAAGGATTCACGGTTTGACGGCGATTCAAATTGAACAACAACTGAAATGGCGGAGATCCATGCAAGCGAAGGCATCTACATTAAGATCATCAACAAAACAAAAAGATGCAGATGATGACCAGGTAAAGGTATGTACACTGGAGGATATGGAACTGCTAATTCCCACAGTGCTGACGCCGGAAGATTTCTCGCATCCACAATTGGATGCTGAACAATTGCGTGATATTGAGCAACAGCTGACAAAATCGCTGTCGAAACCAAGTGCAACTGCAACTGAGCCAACGATACCAGCAGCCGACAGCAAAGGTGGCAATATGAGCATAGGCGCTGAGTTTCTGGTTATGCCCGATGGTTCCCTCCAGCAGGTCAACGACGGTGGAGTTGTCTTTGAGTATATTGATGACAGCAAAAGTGCGCAAACAACAACGGCAACGAATATGACGCTGCAAAATCTCTTGAGTGATTCCAAACCCAACCAGAACTTTGATGCAATACAGATGGATGTGAGTGATCTAGTTGTACAGGAGTCGGCACCGCAGATGACAGTCAAGCCTAAGCCCAGACCGGCACCAGCATCAATTGCCGCACTTAAATACAAGTGTAAACTGTGTCCCAAAGCATTTCCAACTGTAGCTCGCCTTAAATCCCACCAGTTAACCCATAGTCATTTGCCCAAGTTCTATTGCGATCAATGTAGCTTCTATACGCTGCGTTGTGCGGATCTAAAACAGCACTATATGGAAGAACACAATGGATCCATTCAGGAGGTTAGCAAGGGTGGTCTCTTGGAGAGGACACCAATGCCATTGGACAGAAGTCGCATCTACTCGTGCGATATGTGTCTCTTTGATACGCCGAGATGCGCACAGCTACAGATACACTACAGTGAAAAGCATCTGATAACGCCCAGCGAAGTGCAATTGCGTCCAAGTTGGGTCAACGACACGAGGGACAACAGGTACAACAACTCGACAGTTGGATTTCTCCAGGGACCACAGCCAGCCATACCGTTGGGTATTAAATCAACAGACTCGAATGCATTTGCTGCAATGTTTCCCAACCAATCGCTGTTGCCACCGCCAGCTACAGGAGCAGGAGCAGCTGGTGCGAATACCAGCATATTTGGAGATATGCAGGACTTTATTGATAACACAGATGTGGCAGCTATTTGCACTATACCCGCCGATGATATGCCCCCTGTCGATGGAGATGACATTGTCATCGATAATAACAACATTAGTTTGGACTTTGATGCAGAGAACTTGTTTGAAGAGTTCGATGAAGATGTGGAGAAGTTTACCAGTCAGTACAAGTTCGAGAATCACATGTTTGTGCATCGGGGACTGGCGCCATATCGCTGTGAGCTCTGCACCAATTTGTACAACATGAAGCGACTGCTGATACGGCATTATAAGACAGTGCATAAGCGAATGCCCACGCGGGACATGGTGCAGGCTAAGGGTGACAGGGTGTCTGTGGCACGCACCACAATTGAAAAGATCTTTGTGAATAATGATAAAGCACCCATGGTTATGTGCGCAAAGTGTCCTTTCGAATGTGAGCTGGAGAGTGATATGCGTAAGCATCTGAATGCGCATCATGGCATTAACGATGGTGTATCTGTGCATGCCAACGAGGTGTTTATCATACGCAAATTGCCTTTCGAGTGTCCACGCTGCATACGTTCATTTGCGGCGAAACACACGTTGACCCGCCATTTACAACGAAGTCATTTAGTGGACACAATCATTGAGATGCAGGCGCCTCAATTGACAACGAGTTCGGCGCTAACAACAACCACAACGACGGCAACAACCACATTGCCACTGAATACCGGCGAAGAAGATGTCAATAACGCTAGCGAAGCCAACAATGATAACAATAATCAAGGTGATGGCGAAGGTGTAGGCGTAGGCGTAGATAAATGCGAGGAGAAACTATTGAAACTGGATTCCGAGGATGGGGATAATAATGGAACAGACAAGAAAACTATACAAGATACCACGGCAACAATAACTGAGATTCCACCACAAACTGCAATGCCCGAAACTCCAACAACAGCAATATCTGTTTCTTCAACAACAGCTACAACAACACCGGAGGCCACGACAACTACAAATGTGGAGAAAACCACCACCACAGTTGACTCTTCGCTTTTTCCCACGCCCACGCCATTTAATTTTGATCTTGACTTCATGGGCGATGGAGCACAGCCCGCGTCGCTTAAGAACAATAATGATAGTTTTGACGTTATTCCCAATGAGCTACTGAATGGCAGCGATAAGATGCTCACATCTGCACTAGACCCATCGTTCATAAATATTGTGCGTTCATGCGGTCTGCCGTTCGATGAACACAGGAAATTGTTGCAAAACGAATTGGAACAACATTCCAGTTCCTGCGATCTGCCGCGTACTCCGATCTTTGTGTGCAAGCAATGCAATCAGACGTTCGATGAACTCAAGAAATTGTTGCAACACGAATTGGATCAGCATTCCAGTGGCACGCTGTCGCCGCGTAGTAGCTATCAACATCAGTGCGATATTTGCCATACAACATATCGTACTGTGACGTTGCTCAACTATCATAGAAAGCGACATTTTACTACACGTAAGGTGGAGTGTAAAAAGTGCACCAAAGAGTTCGCGAGTGCCGAAGAACTAGAGCAGCATGTGGACGCGGATCATCGCGATAAAATGATACTCAAATGTGGCGTGGATGGCTGTAAGAAGACTTTTAATTATAAACATCATCTGAAGCGACATCAGACAGCTTCCCATACGCCTGTACAGTACATATGTCCGGAATGCGGTAGGGATATGATGACTAGTCTGCATCTACGCAATCATATGAGCATGCACAGGGGCACACACTCATACAAGTGCCCAAAGTGTGTGCGCACCTATATGCGACGCAATCCTTTTAGAAGACATGCGCTGCGTGAACACAAATGGGAGCTAACCGACGATCAGATGAAAGAAATCTATTGTGCAAACGATACGCAAAATTCTATTCAATTGCGCAGTCGTAGATCGGTTGGAGTTGAGAATGAGGAATCTGATTAG
- Protein Sequence
- MAYKRQKTEDIDVNFKFACRCCLKSETELLKLDVPTESSLDDNDGSSTKVPLIRFLLFCMRTENMPELPQVICIECSKSLKIAYFFIQNSLKAHEILCRKLCPGKTKTSAHFNGQQQQQTQSLSDRFEGDDATVGTNHRAKQQRSGVRHGCKICGAIIYNRLELKQHIRMHAEQSRHSCKLCSYVTLKLHQLPEHYRRIHGLTAIQIEQQLKWRRSMQAKASTLRSSTKQKDADDDQVKVCTLEDMELLIPTVLTPEDFSHPQLDAEQLRDIEQQLTKSLSKPSATATEPTIPAADSKGGNMSIGAEFLVMPDGSLQQVNDGGVVFEYIDDSKSAQTTTATNMTLQNLLSDSKPNQNFDAIQMDVSDLVVQESAPQMTVKPKPRPAPASIAALKYKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCSFYTLRCADLKQHYMEEHNGSIQEVSKGGLLERTPMPLDRSRIYSCDMCLFDTPRCAQLQIHYSEKHLITPSEVQLRPSWVNDTRDNRYNNSTVGFLQGPQPAIPLGIKSTDSNAFAAMFPNQSLLPPPATGAGAAGANTSIFGDMQDFIDNTDVAAICTIPADDMPPVDGDDIVIDNNNISLDFDAENLFEEFDEDVEKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDRVSVARTTIEKIFVNNDKAPMVMCAKCPFECELESDMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKHTLTRHLQRSHLVDTIIEMQAPQLTTSSALTTTTTTATTTLPLNTGEEDVNNASEANNDNNNQGDGEGVGVGVDKCEEKLLKLDSEDGDNNGTDKKTIQDTTATITEIPPQTAMPETPTTAISVSSTTATTTPEATTTTNVEKTTTTVDSSLFPTPTPFNFDLDFMGDGAQPASLKNNNDSFDVIPNELLNGSDKMLTSALDPSFINIVRSCGLPFDEHRKLLQNELEQHSSSCDLPRTPIFVCKQCNQTFDELKKLLQHELDQHSSGTLSPRSSYQHQCDICHTTYRTVTLLNYHRKRHFTTRKVECKKCTKEFASAEELEQHVDADHRDKMILKCGVDGCKKTFNYKHHLKRHQTASHTPVQYICPECGRDMMTSLHLRNHMSMHRGTHSYKCPKCVRTYMRRNPFRRHALREHKWELTDDQMKEIYCANDTQNSIQLRSRRSVGVENEESD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01559951; iTF_01549121; iTF_01551236; iTF_01557063; iTF_01552700; iTF_01555645; iTF_01550519;
- 90% Identity
- -
- 80% Identity
- -