Basic Information

Insect: Zaprionus nigranus
Gene Symbol: -
Assembly: GCA_018903425.1
Location: JAEIGD010000010.1:1057936-1062832[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0084 0.76 10.6 0.1 3 23 151 171 150 171 0.99

2 14 0.00011 0.01 16.5 1.3 1 23 395 417 395 417 0.98

3 14 7.6 6.9e+02 1.3 0.7 1 23 423 446 423 446 0.86

4 14 1 91 4.1 1.4 1 23 472 495 472 495 0.93

5 14 0.001 0.091 13.5 1.9 3 23 675 695 674 695 0.92

6 14 0.04 3.6 8.5 1.4 1 23 701 724 701 724 0.98

7 14 0.99 90 4.1 1.6 3 23 762 782 760 783 0.87

8 14 0.0045 0.41 11.5 1.9 1 23 804 827 804 827 0.97

9 14 0.023 2.1 9.2 0.7 1 23 1058 1081 1058 1081 0.90

10 14 0.0066 0.6 10.9 6.0 1 23 1094 1116 1094 1116 0.98

11 14 0.00018 0.016 15.9 0.1 2 23 1123 1145 1122 1145 0.89

12 14 0.00062 0.056 14.2 4.1 2 23 1152 1176 1151 1176 0.90

13 14 0.0016 0.14 12.9 0.6 1 23 1181 1203 1181 1203 0.98

14 14 0.0053 0.48 11.2 1.3 1 23 1209 1232 1209 1232 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0084	0.76	10.6	0.1	3	23	151	171	150	171	0.99
2	14	0.00011	0.01	16.5	1.3	1	23	395	417	395	417	0.98
3	14	7.6	6.9e+02	1.3	0.7	1	23	423	446	423	446	0.86
4	14	1	91	4.1	1.4	1	23	472	495	472	495	0.93
5	14	0.001	0.091	13.5	1.9	3	23	675	695	674	695	0.92
6	14	0.04	3.6	8.5	1.4	1	23	701	724	701	724	0.98
7	14	0.99	90	4.1	1.6	3	23	762	782	760	783	0.87
8	14	0.0045	0.41	11.5	1.9	1	23	804	827	804	827	0.97
9	14	0.023	2.1	9.2	0.7	1	23	1058	1081	1058	1081	0.90
10	14	0.0066	0.6	10.9	6.0	1	23	1094	1116	1094	1116	0.98
11	14	0.00018	0.016	15.9	0.1	2	23	1123	1145	1122	1145	0.89
12	14	0.00062	0.056	14.2	4.1	2	23	1152	1176	1151	1176	0.90
13	14	0.0016	0.14	12.9	0.6	1	23	1181	1203	1181	1203	0.98
14	14	0.0053	0.48	11.2	1.3	1	23	1209	1232	1209	1232	0.96

Sequence Information

Coding Sequence: ATGGCGTACAAGCGGCAAAAAACAGAGGACATGGATGTTAATTTTAAGTTTGCGTGTCGCTGTTGTCTCAAATCTGAGACGGAACTGTTAAAGCTGGACGTGCCTACAGACAGCAGCCTGGACGACAATGATGCCTCATCCACAAAAGTGCCCCTTATACGGTTTCTATTGTTCTGTATGCGCACTGAGAATATGCCCGAGCTGCCGCAAGTGATTTGCATTGAATGCAGTAAAAGTCTAAAAATCGCATACTTCTTCATACAAAACTCTCTCAAGGCACACGAAATACTGTGTCGCAAACTCTGTCCGGGCAAGACGAAGACTTCAGCGCGTTTCAATGGCCAACAGCAGCAGCAGACCCAGTCTATTTCCGATAGATTTGAGGGAGATGACGCGACAGTTGGTACAAATCACAGAGCGAAGCAACAGAGGTCTGGTGTGCGACACGGATGCAAAATCTGCGGCGCTATCATCTATAATCGTCTGGAGCTGAAGCAGCACATACGCATGCATGCAGAGCAATCACGGCATTCGTGCAAATTGTGCAGCTATGTGACACTTAAACTACACCAGCTTCCGGAGCATTATCGAAGGATTCACGGATTGACGGCGATTCAAATTGAAAAACAACTGAAATGGCGGAGATCCATGCAAGCGAAGGCATCTACATTAAGATCATCAACAAAACAAAAAGATGCAGATGATGACCAGGTAAAGGTGTGTACACTGGAGGATATGGAACTGCTAATTCCCACAGTGCTGACGCCGGAAGATTTATCGCATCCACAATTGGATGCTGAACAATTGCGTGATATTGAGCAACAGCTGACAAAATCGCTGTCAAAACCATGTGCAACTGCAACGGTGCCAACGATACCAGCAGCAGACAGCAAAGGTGGCAATATGAGCATAGGTGCTGAGTTTCTGGTAATGCCCGATGGTTCCCTCCAGCAGGTCAACGCTGGTGGAGTTGTTTTTGAGTATATTGATGACAGCAAAAGTGCGCAAACAACAACGACCACGAATATGACGCTGCAGAATCTCTTGAGTGATTCCAAACCCAACGAGAACTTTGATGCAATACAGATGGATGTGAATGATCTAGTTGTACAGGAGTCGCCACCGCAGATAACAGTCAAGTCTAAGCCCAGACCGGCACCAGCATCAATTGCCGCACTTAAACACAAGTGTAAACTGTGTCCCAAAGCATTTCCCACTGTAGCTCGCCTTAAATCCCACCAGTTAACCCATAGTCATTTGCCTAAGTTCTATTGCGATCAATGTAGCTTCTATACGTTGCGTAGTGCGGATCTAATACAGCACTATACGGAAGAACACAAAGGATCCATTCAGGAGGTAAGCAAAGGTGGTATTTTGGAAAGAACTCCAATGCCATTGGACAGAAGTCGCATCTACTCGTGTGATATGTGTCTCTTTGACACGCCGAGATGCGCACAGCTACAGATACACTACAGTGAAAAGCATCTGATAACGCCCAGCGAGGTGCAGTTGCGTCCAAGCTGGGTCAATGACACGAGGGACAACAGGTACAATAACTCGACAGTTGGAATTCTCCGGGGACCACAGCCAGCCATACCGTTGGGTATTAAATATCCACCCACGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGAATGCATTTGCTGCAATGTTTCCCAACCAATCGCTGTTGCCACCACCAGTTACAGGAGCTGGAGCAGCTGGTGCGAATACCAGCATATTTGGAGATATGCAGGACTTTATTGACAACACAGACGTGGCAGCTATTTGCACTATACCCGCCGATGATATGCCCGCTGTTGATGGAGATGATATTCATCTGCAGAAACCCTATTGTATATATTGTAACAAGAAGTTTACCAGTCAGTACAAGTTCGAGAATCACATGTTTGTGCATCGAGGACTGGCGCCATATCGCTGTGAGCTCTGCACCAATTTGTACAACATGAAGCGACTGCTGATAAGGCATTATAAGACAGTGCATAAGCGAATGCCCACGCGGGACATGGTGCAGGCAAAGGGTGACAGGGTGTCTGTGGCACGCACCACAATTGAAAAGATCTTTGTGAATAATGATAGAGCACCCATGGTTATGTGCGCAAAGTGTCCTTTCGAATGTGAGCTGGAGAGTGATATGCGTAAGCATCTTAATGCGCATCATGGCATCAACGATGGTGTATCTGTGCATGCCAACGAGGTGTTTATCATACGCAAGTTGCCTTTCGAGTGTCCACGATGCATACGCTCATTTGCGGCGAAACACACGTTGACCCGCCATTTACAACGAAGTCATTTAGTGGACACAATCATTGAGATGCAGGCGCCTCAATTGACAACGAGTTCGGCGCTAACAACAACCACAACGACGGCAACAACCACATTGCCGCTGAATACCGGCGAAGAAGATGTCAATAACGCTAGCGAAGCCAACAATGATAACAATAATCAAGGTGATGGCGATGGTGTAGGCGTAGGCGTAGATAAATGCGAGGAGAAACTATTGAAACTGGATTCCGAGGATTTGGATAATAATGGAACAGACAAGAAATCTATACAAGATACCACGGCAACAATAACTGAGATTACACCACAAACTGCAATGCCTGAAACTACAACAACAGCAATATCTGTTGCTTCAACAACAGCTACAACAACACCGGAGGCCACGACAACTACAAATGTGGAGAAAACCACCACCACAGTTGACTCTTCGCTTTTTCCCACGCCCACGCCATTTAATTTTGATCTGGACTTCATGGGCGATGGAGCACAGGCCGCGTCGCTTAAAAACAATAATGATAGTTTTGACGTTATGCCCAGTGAGCTACTGAATGGCAGCGATAAGATGCTCACAGCTGCACTAGACCCATCGTTTATAAAGATTGTGCGTTCATGCGGTCTGCCGTTCGATGAACACAGGAAATTGTTGCAAAACGAATTGGATCAACATTCCAGTTCATGCAATCTGCCGCGTACTCCGATCTTTGTGTGCAAGCAATGCAATCAGACGTTCGATGAACTCAGGAAATTGTTGCAACACGAATTGGATCAACATTCCAGTGGCACGCTGTCACCGCGTAGTAGCTATCAACATCAGTGTGACATATGCCATACAACATATCGTACTGTGACGTTGCTAAACTATCATAGAAAGCGACATTTTACTACACGTAAGGTGGAGTGTAAAAAGTGCCCGAAGGAGTTCACAAGTGCGGAAGAACTGGAACAGCACGTGGACGCGGAGCATCGCGATAAAATGATACTCAAATGTGGCGTGGATGGCTGTAAGAAGACTTTTAATTATAAACATCATCTGAAGCGACATCAGACAGCCTCCCATACGCCTGTACAGTACATATGTCCGGAATGCGGCAGGGATATGATGACTAGCCTGCATCTACGCAATCACATGAGCATGCACAGGGGCACTCACTCATACAAGTGCCCCAAGTGTGTGCGCACCTATATGCGACGCAATCCTTTTCGAAGACATGCGCTGCGTGAACACAAGTGGGAGCTGACCGACGATCAGATGAAAGAAATCTATTGCGCAAACGATACGCAAAATTCTATTCAATTGCGTAGTCGTAGATCGGTTGGAGTTGAGAATGAGGAATCTGATTAG
Protein Sequence: MAYKRQKTEDMDVNFKFACRCCLKSETELLKLDVPTDSSLDDNDASSTKVPLIRFLLFCMRTENMPELPQVICIECSKSLKIAYFFIQNSLKAHEILCRKLCPGKTKTSARFNGQQQQQTQSISDRFEGDDATVGTNHRAKQQRSGVRHGCKICGAIIYNRLELKQHIRMHAEQSRHSCKLCSYVTLKLHQLPEHYRRIHGLTAIQIEKQLKWRRSMQAKASTLRSSTKQKDADDDQVKVCTLEDMELLIPTVLTPEDLSHPQLDAEQLRDIEQQLTKSLSKPCATATVPTIPAADSKGGNMSIGAEFLVMPDGSLQQVNAGGVVFEYIDDSKSAQTTTTTNMTLQNLLSDSKPNENFDAIQMDVNDLVVQESPPQITVKSKPRPAPASIAALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCSFYTLRSADLIQHYTEEHKGSIQEVSKGGILERTPMPLDRSRIYSCDMCLFDTPRCAQLQIHYSEKHLITPSEVQLRPSWVNDTRDNRYNNSTVGILRGPQPAIPLGIKYPPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNAFAAMFPNQSLLPPPVTGAGAAGANTSIFGDMQDFIDNTDVAAICTIPADDMPAVDGDDIHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDRVSVARTTIEKIFVNNDRAPMVMCAKCPFECELESDMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKHTLTRHLQRSHLVDTIIEMQAPQLTTSSALTTTTTTATTTLPLNTGEEDVNNASEANNDNNNQGDGDGVGVGVDKCEEKLLKLDSEDLDNNGTDKKSIQDTTATITEITPQTAMPETTTTAISVASTTATTTPEATTTTNVEKTTTTVDSSLFPTPTPFNFDLDFMGDGAQAASLKNNNDSFDVMPSELLNGSDKMLTAALDPSFIKIVRSCGLPFDEHRKLLQNELDQHSSSCNLPRTPIFVCKQCNQTFDELRKLLQHELDQHSSGTLSPRSSYQHQCDICHTTYRTVTLLNYHRKRHFTTRKVECKKCPKEFTSAEELEQHVDAEHRDKMILKCGVDGCKKTFNYKHHLKRHQTASHTPVQYICPECGRDMMTSLHLRNHMSMHRGTHSYKCPKCVRTYMRRNPFRRHALREHKWELTDDQMKEIYCANDTQNSIQLRSRRSVGVENEESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01558564;
90% Identity: iTF_01551236; iTF_01555645; iTF_01559951; iTF_01550519;
80% Identity: -