Basic Information

Insect: Zaprionus gabonicus
Gene Symbol: -
Assembly: GCA_018903695.1
Location: JAEIFO010000401.1:18542170-18546976[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0086 0.6 10.5 0.1 3 23 151 171 150 171 0.99

2 14 0.00012 0.0082 16.4 1.3 1 23 395 417 395 417 0.98

3 14 7.6 5.3e+02 1.3 0.7 1 23 423 446 423 446 0.87

4 14 0.21 15 6.1 2.0 1 23 472 495 472 495 0.95

5 14 0.001 0.072 13.4 1.9 3 23 747 767 746 767 0.92

6 14 0.041 2.9 8.4 1.4 1 23 773 796 773 796 0.98

7 14 1 71 4.0 1.6 3 23 834 854 832 855 0.87

8 14 0.0046 0.32 11.4 1.9 1 23 876 899 876 899 0.97

9 14 0.021 1.5 9.3 1.0 1 23 1103 1126 1103 1126 0.90

10 14 0.013 0.93 9.9 5.8 1 23 1139 1161 1139 1161 0.98

11 14 0.00014 0.0096 16.2 0.1 2 23 1168 1190 1167 1190 0.91

12 14 0.00063 0.044 14.1 4.1 2 23 1197 1221 1196 1221 0.90

13 14 0.031 2.2 8.8 0.6 1 23 1226 1248 1226 1248 0.97

14 14 0.0054 0.38 11.2 1.3 1 23 1254 1277 1254 1277 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0086	0.6	10.5	0.1	3	23	151	171	150	171	0.99
2	14	0.00012	0.0082	16.4	1.3	1	23	395	417	395	417	0.98
3	14	7.6	5.3e+02	1.3	0.7	1	23	423	446	423	446	0.87
4	14	0.21	15	6.1	2.0	1	23	472	495	472	495	0.95
5	14	0.001	0.072	13.4	1.9	3	23	747	767	746	767	0.92
6	14	0.041	2.9	8.4	1.4	1	23	773	796	773	796	0.98
7	14	1	71	4.0	1.6	3	23	834	854	832	855	0.87
8	14	0.0046	0.32	11.4	1.9	1	23	876	899	876	899	0.97
9	14	0.021	1.5	9.3	1.0	1	23	1103	1126	1103	1126	0.90
10	14	0.013	0.93	9.9	5.8	1	23	1139	1161	1139	1161	0.98
11	14	0.00014	0.0096	16.2	0.1	2	23	1168	1190	1167	1190	0.91
12	14	0.00063	0.044	14.1	4.1	2	23	1197	1221	1196	1221	0.90
13	14	0.031	2.2	8.8	0.6	1	23	1226	1248	1226	1248	0.97
14	14	0.0054	0.38	11.2	1.3	1	23	1254	1277	1254	1277	0.96

Sequence Information

Coding Sequence: ATGGCGTACAAGCGGCTAAAAACAGAGGACATGGATGTCAATTTTAAGTTTGCGTGTCGCTGTTGTCTCAAATCCGAGACGGAATTATTAAAGCTGGACGTGCTTACAGAGAGCAGCCTGGACGATAGTGACGCCTCATCCACAAAAGTGCCTCTCATACGGTTTCTACTGTTTTGTATGCGCACTGAAAATATGCCCGAGCTGCCGCAAGTGATATGCATTGAGTGCAGTAAGAGTCTGAAAATTGCATACTTTTTCATACAAAACTCTCTCAAGGCACACGAAATACTGTGTCGCAAACTTTGTCCGGGCAAGGCGAAGCCATCTGTGCGCTTTAATGGTCAACAACAGCAGCAGACCCAGTCCATTTCCGATAGATTTGAGGGAGACGACGCGACAGTTGGCACAAGTCACAGTACAAAGCAACAGAGGTCTGGTGTGCAACATGGATGCAAAATCTGCGGCGCTATAATCTACAATCGTCTGGAGCTCAAGCAGCACATACGTATGCATGCAGAGCAATCACGGCATTCATGCAAATTGTGCAGCTATGTGACTCTTAAACTACACCAGCTTCCGGAGCATTATCGAAGGGTTCACGGATTGACGGCGATTCAAATTGAACAACAACTGAAATTACGGAGATCCATGCAAGCGAAGGCAGCTACATTAAGATCACCAGCAAAACAAAAAGATTCAAATGATGACCAGGTGAAGGTGTGTACACTAGAGGATATGGAACTGCTAATTCCTACAGTGCTGACACCGGAAGATTTCTCGCATCCACAATTGGATGCTGAACAATTACGTGATATTGAGCAACAGCTGACAAACTCGCTGTCCAAACCAAGTGCAACTACAAATGAGCCAACGATACCAGCAGCCGACAGCAAAGGTGGCAATATGAGTGTAGGTGCTGAGTTTCTGGTTATGCCGGATGGTTCCCTCCAGCAGGTCAACGACGGTGGAGTTGTTTTTGAGTATATTGATGATAGTAAAAATGCGCAAACAACAACGACAACGAATATGACACTGCAGAATCTCTTGAGCGATTCCAAACCTAACGCAAACTTTGATGCAATACAGATGGATGTGAATGATCTAGTTGTACAGGAGTCGCCACCACAGATAACAGTCAAGCCTAAGCCCAGGCCGGGGCCAGGGTCAATTGCTGCACTTAAACACAAGTGTAAACTGTGTCCCAAAGCATTTCCCACTGTAGCTCGCCTTAAATCCCACCAGTTAACCCATAGTCATTTGCCTAAGTTCTATTGCGATCAATGTACCTTCTATACTTTGCGTAGTGCGGATCTAATACAGCACTATACGGAAGAACACAAAGGATCCATTCAGGAAGTTAGCAAAGGTAATCTCTTAGAGAGAACACCAATGCCATTGGACAGAAATCGCATCTACTCGTGTGATATGTGTCTGTTTGATACGCCAAGATGCTCACAGCTACAGATACACTACAATGAAAAGCATCTGATAACGCCCAGCGAAGTGCAGTTGCGTCCAAGCTGGGTCAACGACACGAAGGACAACAGATACAACAACTCGACAGTTGGATTTCGCCGGGAACCACAGCCAGCCATACCGTTGGGTATTAAATATCCACCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCGAATGCCTTTGCTGCAATGTTTCCCAATCAATCGCTATTGCCACCACCGGCTACAGGAGCTGGAGCAGCTGGTGCGAATACCAGCATATTTGGAGATATGCAGGACTTTATTGATAACACAGATGTGGCAGCGATTTGCACTATACCCGCCGATGATATGCCCGCTGTCGATGGAGATGATATTGTCATTGATAATAACAACATTAGTTTGGACTTTGATGCAGAGAATCTGTTTGAAGAGTTTGATGAAGATGTGGAGGTGGGCGACGAAGATGACGAGGATGCCGAGAATGAGGATGAGAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAATCAAAGCATCTGCAGAAACCTTATTGTATATATTGTAACAAGAAGTTTACCAGTCAGTACAAGTTCGAGAATCACATGTTTGTGCATCGAGGACTGGCGCCATATCGCTGTGAGCTCTGCACCAATTTATACAACATGAAGCGACTGTTGATACGGCATTATAAGACAGTGCATAAGCGAATGCCCACGCGGGACATGGTGCAGGCTAAGGGTGACAAGGTGTCTGTGGCACGCACCACAATTGAAAAGATCTATGTGAATAATGATAGAGCACCCATGGTTATGTGCGCAAAGTGTCCTTTTGAATGTGAGCTGGAGAGTGATATGCGTAAGCATCTGAATGCGCATCATGGCATCAACGATGGTGTGTCTGTGCACGCCAACGAGGTGTTTATCATACGCAAGTTGCCTTTCGAGTGTCCACGTTGCATACGGTCATTTGCGGCGAAACACACTTTGACCCGCCATTTACAACGAAGTCATTTAGTGGACACAATCATTGAGATGCAGGCGCCTCAATTGACAACGAGTTCGGCGCTAACAACAACCACAACGACGGCAACAACTACATTGCCGTTGAATACCGGCGAAGCGGATGTCAATAACGCTAGCGAAGCCAACAATGATAACAATAATCAAGGTGATGGCGAAGGCGTAGGCGTAGATAAATGCGAGGAGAAACTAATGAAAATGGATTCCGAAGATGTGGATAACAATGGAACAGACAAGAAAAGTATAGAAGATACCACGGCACAAACAGTAATGCCTGAAACTCCATCAACAGCAATATCAGATGTATCTGTTGCATCAACAACAGCTACAACAACAACAGCAGAGGCCACGACAACTACAAATGAGGAGAAAACTACCACCACAGTCGATTCTTCGCTTTTTCCCACGCCCACGCCATTTGAATTTGATCTGGACTTCATTGGCGATGGGGCACAGGAAGCGTCGCTTAAGAACAATAATGATAGTTTTGACGTTATGCCCAATCAGCTACTGAATGGCAGCGATAAGCTCCTTACAGCTGCATTAGACCCAACGTTTATTAAGATGCTGCGCACATGCGGTCTGCCGCGCACTCCAATCTTTGTGTGCAAGCAATGCAATCAGACGTTCGATGAACTCAAGAAATTGTCGCAACACGAATTGGATCAACATTCCAGTGGCACGCAGTCACCGCGTAGTAGCTATCAACATCAGTGCGATGTTTGCCATAAAACATATCGTACTGTGACGTTGCTCGACTATCATAGAAAGCGACATTTTGCTACACGTAAGGTGGAGTGTAAAAAGTGCCCGAAGGAGTTCACGAGTGCCGAAGAATTAGAGCAGCACGTGGAGGCGGACCATCGCGATAAAATGATACTCAAATGTGGTGTGGATGGCTGTAAGAAGACTTTTAATTATAAACATCATCTGAAGCGACATCAGACCGCCTCCCATACGCCTGTACAGTACATATGTCCGGAATGCGGCAGGGATATGTTGACTAGTCTGCATCTACGCAATCATATGAGCATGCACAGGGGCACACACTCGTACAAGTGCCCCAAGTGTGTGCGCACTTATATGCGACGCAATCCTTTTCGAAGACATGCGCTGCGTGAACACAAGTGGGAGCTAACCGACGATCAGATGAAAGAAATCTATTGCGCAAACGATACGCAAAGTGATGTTCAATTGCGCAGTCGTAAATCAGTTGGAGTTGAGAATGAGGAATCTGATTAG
Protein Sequence: MAYKRLKTEDMDVNFKFACRCCLKSETELLKLDVLTESSLDDSDASSTKVPLIRFLLFCMRTENMPELPQVICIECSKSLKIAYFFIQNSLKAHEILCRKLCPGKAKPSVRFNGQQQQQTQSISDRFEGDDATVGTSHSTKQQRSGVQHGCKICGAIIYNRLELKQHIRMHAEQSRHSCKLCSYVTLKLHQLPEHYRRVHGLTAIQIEQQLKLRRSMQAKAATLRSPAKQKDSNDDQVKVCTLEDMELLIPTVLTPEDFSHPQLDAEQLRDIEQQLTNSLSKPSATTNEPTIPAADSKGGNMSVGAEFLVMPDGSLQQVNDGGVVFEYIDDSKNAQTTTTTNMTLQNLLSDSKPNANFDAIQMDVNDLVVQESPPQITVKPKPRPGPGSIAALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCTFYTLRSADLIQHYTEEHKGSIQEVSKGNLLERTPMPLDRNRIYSCDMCLFDTPRCSQLQIHYNEKHLITPSEVQLRPSWVNDTKDNRYNNSTVGFRREPQPAIPLGIKYPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNAFAAMFPNQSLLPPPATGAGAAGANTSIFGDMQDFIDNTDVAAICTIPADDMPAVDGDDIVIDNNNISLDFDAENLFEEFDEDVEVGDEDDEDAENEDENXXXXXXXXXXXXXXXXXXXXXXXXXXQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVARTTIEKIYVNNDRAPMVMCAKCPFECELESDMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKHTLTRHLQRSHLVDTIIEMQAPQLTTSSALTTTTTTATTTLPLNTGEADVNNASEANNDNNNQGDGEGVGVDKCEEKLMKMDSEDVDNNGTDKKSIEDTTAQTVMPETPSTAISDVSVASTTATTTTAEATTTTNEEKTTTTVDSSLFPTPTPFEFDLDFIGDGAQEASLKNNNDSFDVMPNQLLNGSDKLLTAALDPTFIKMLRTCGLPRTPIFVCKQCNQTFDELKKLSQHELDQHSSGTQSPRSSYQHQCDVCHKTYRTVTLLDYHRKRHFATRKVECKKCPKEFTSAEELEQHVEADHRDKMILKCGVDGCKKTFNYKHHLKRHQTASHTPVQYICPECGRDMLTSLHLRNHMSMHRGTHSYKCPKCVRTYMRRNPFRRHALREHKWELTDDQMKEIYCANDTQSDVQLRSRKSVGVENEESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01558564;
90% Identity: iTF_01549121;
80% Identity: -