Zorn012127.1
Basic Information
- Insect
- Zaprionus ornatus
- Gene Symbol
- ftz-f1
- Assembly
- GCA_018904035.1
- Location
- JAEIFZ010000200.1:3122467-3136427[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-18 1.2e-14 54.6 3.7 1 76 197 272 197 287 0.71 2 2 9.5e-71 8.3e-67 226.3 1.8 116 409 255 551 233 552 0.79
Sequence Information
- Coding Sequence
- ATGTTATTAGAAATGGATCAGCAACAGGCGACTTATATATTCCCGACAGGCTACCAGGAGACAAACTCCTCGCACTCACAGCAGAGTGGCAACGGTGGCACCTCGGCCAGTGGCAATGCTGGCCAATTGTTGAACGGCATTGGCAGCGGCGCTGGCAACTCTGCTGGTGGTGGCAGCTACATGTTGCTGCCCCCTGGTGCAGGTGCCGGTGGCAACTCAGGCGCCGGTGCTGGTCACATGTCCAGCGGCGGTGGTGGTGGCTCCAGCGGTACGGGTGTTGGTGGAACCGGAGCTGGCAACGGTGGCCATCATGGGGGCACAAGTGCCACCTCAGGTGGCAACGGTGAAGCCATCGATTTCAAGCATCTCTTTGAGGAGTTGTGCCCCGTTTGCGGTGACAAAGTGAGCGGTTACCACTATGGACTGCTCACCTGCGAGTCCTGCAAGGGCTTCTTCAAGCGCACCGTGCAGAACAAGAAGGTCTACACCTGCGTCGCCGAACGATCCTGTCACATCGATAAGACCCAGCGCAAGCGTTGTCCCTACTGTCGATTCCAAAAGTGCCTCGAGGTGGGCATGAAACTGGAGGCTGTACGAGCGGATCGCATGCGAGGCGGTCGCAATAAGTTTGGACCCATGTACAAGCGGGATCGGGCGCGAAAGTTACAGGTGATGCGACAGCGGCAATTGGCGCTTCAGGCGCTGCGCACCTCGATGGGGACGGACATTAAGCCGACTCCCCTTTCGCCGGGCTATCAGCAAGCATATCCAAATATGAACATTAAGCAAGAAATTCAAATACCTCAGGTATCCTCACTCACACAGTCACCAGACTCGTCGCCCAGCCCTATTGCCATTGCCCTGGGTCAGAACACAGCCGAATCGAAATTGTGCTTCGATTCTGGCACACATCCATCGAGCACAGCCGATGCGCTCATCGAGCCACTGAGGGTCTCACCAATGATACGTGAATTTGTGCAATCGATCGACGATCGGGAATGGCAGACGCAGCTGTTTGCTCTGCTGCAGAAGCAGACGTACAACCAGGTCGAAGTGGATCTCTTTGAGTTAATGTGCAAAGTGCTCGATCAGAATCTGTTCTCTCAGGTCGATTGGGCAAGAAACACTGTCTTCTTTAAGGATTTAAAGGTGGATGACCAAATGAAGCTGCTACAGCACTCGTGGTCCGATATGCTTGTCTTGGATCATCTGCATCATCGTATACACAATGGGCTGCCCGATGAGACGCAGCTTAACAATGGGCAAGTGTTCAACCTGATGAGCCTGGGCCTGTTGGGAGTGCCGCAACTTGGAGACTATTTCAATGAGCTGCAGAATAAGCTGCAGGATCTGAAGTTCGACATGGGCGACTATGTGTGCATGAAATTCCTAATACTGTTAAATCCAGATGTGCGAGGCATTGTGAACAAGAAGACCGTGCAGGAAGGACACGAGAGTGTGCAGGCAGCGCTGCTCGACTACACTCTCACCTGCTATCCCTCAGTAAATGATAAATTCAAGAGGCTATTGGACATTTTACCGGGAATTCACGCCATGGCCGCACGCGGCGAGGCGCATCTGTACTCGATGCACTGCGATGGTGGAGCGCCGACGCAGACGCTGCTGATGGAAATGCTGCACGCCAAGCGGAAGGGGTAA
- Protein Sequence
- MLLEMDQQQATYIFPTGYQETNSSHSQQSGNGGTSASGNAGQLLNGIGSGAGNSAGGGSYMLLPPGAGAGGNSGAGAGHMSSGGGGGSSGTGVGGTGAGNGGHHGGTSATSGGNGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRTSMGTDIKPTPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQNTAESKLCFDSGTHPSSTADALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLMSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIVNKKTVQEGHESVQAALLDYTLTCYPSVNDKFKRLLDILPGIHAMAARGEAHLYSMHCDGGAPTQTLLMEMLHAKRKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00587454;
- 90% Identity
- iTF_01557612; iTF_01553994; iTF_01554017; iTF_00579308; iTF_00579332; iTF_01553262; iTF_01553284; iTF_01556886; iTF_01556867; iTF_00587454; iTF_00587429;
- 80% Identity
- iTF_01557612;