Dpru006364.1
Basic Information
- Insect
- Drosophila pruinosa
- Gene Symbol
- ftz-f1_1
- Assembly
- GCA_018150935.1
- Location
- JAECWR010000199.1:28390904-28403598[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-19 6e-15 55.6 3.4 1 80 196 274 196 295 0.74 2 2 3.9e-74 3.6e-70 237.5 2.7 117 408 255 549 248 551 0.81
Sequence Information
- Coding Sequence
- ATGTTATTAGAAATGGATCAACAACAGGCGACTTACATATTCCCCACAGGCTACCAGGAGACAAACTCCTCGCACTCCCAGCAGAGTGGCAATGGCGGTGGCAACTCTGGTGCTGGCAATGCAGCACAGCTTTTGAATGGCGGCGCCAGCTCGGGCGCTGGCAATGGCTACATGCTGCTGCCACCGGCTGGCGGTGGTGCTGGCAACTCTGCCACGGCTGGTGGCAATCATATGGCTGGCAATGTCGGAGCTGGCACCTCAGCTGCTGCCGGCGGTGGCCATGGCGGTGGCGCTGGCGGTGGTGGACATGGTGGCACCAGTGCCAGCTCGGGGGGCGGCGGGGAGGCCATTGATTTCAAGCATCTGTTCGAGGAACTGTGCCCCGTGTGTGGCGACAAGGTGAGCGGCTACCATTATGGCCTGCTCACCTGCGAGTCCTGCAAGGGCTTCTTCAAGCGCACCGTGCAGAACAAAAAGGTCTACACATGCGTCGCGGAGCGTTCCTGCCACATCGACAAGACGCAGCGCAAGCGTTGTCCCTACTGTCGCTTCCAAAAGTGCCTCGAGGTGGGCATGAAACTGGAGGCGGTTCGAGCGGATCGCATGCGAGGCGGTCGCAACAAGTTCGGACCGATGTACAAAAGGGATCGAGCGCGGAAGCTGCAGGTGATGCGACAGCGCCAGTTGGCGCTGCAGGCGTTGCGCAGTTCGATTGGGTCAGACATCAAACCGACGCCTCTCTCGCCGGGCTATCAGCAAGCATATCCAAATATGAATATTAAGCAAGAAATACAAATACCTCAGGTATCCTCACTCACACAGTCGCCGGACTCATCGCCCAGTCCCATTGCCATTGCACTGGGGCAGAGCACAGCCGAATCGAAATTGTGCTTCGATTCTGGCACGCATCCATCGAGCACAGCCGATGCGCTTATCGAGCCACTGAGGGTATCACCAATGATACGTGAGTTTGTGCAATCGATCGACGATCGGGAATGGCAGACGCAGCTTTTTGCGCTGCTGCAGAAGCAGACGTACAATCAAGTAACCGTGGATCTCTTTGAGCTAATGTGCAAAGTGCTGGATCAGAATCTGTTCTCGCAAGTCGATTGGGCAAGAAACACCGTCTTCTTTAAGGATCTGAAGGTGGACGATCAAATGAAACTGCTGCAGCACTCTTGGTCCGACATGCTTGTGCTTGACCATCTGCATCACCGCATACACAACGGTCTGCCCGATGAGACGCAACTGAATAACGGTCAGGTGTTCGATCTGATGAGCCTCGGCCTTTTGGGCGTGCCCCAGTTGGGTGATTACTTCAATGAGCTGCAGAATAAGCTGCAGGACCTCAAGTTTGATATGGGCGATTATGTGTGCATGAAATTCCTAATACTGTTAAATCCAGATGTGCGTGGCATTGTCAACAAGAAGACCGTCTTGGAGGGGCACGAGAGTGTGCAGGCAGCGCTGCTGGATTACACTCTTACGTGTTATCCCTCAGTGAATGACAAATTCAGGAGGCTATTGAACATACTACCGGAAATCCACGCCATGGCCTCACGTGGCGAGGAGTATCTGTACTCGAAGCACTGTGCTGGCAGTGCGCCCACGCAGACGCTGCTCATGGAGATGCTGCATGCCAAGCGGAAGGTGTAA
- Protein Sequence
- MLLEMDQQQATYIFPTGYQETNSSHSQQSGNGGGNSGAGNAAQLLNGGASSGAGNGYMLLPPAGGGAGNSATAGGNHMAGNVGAGTSAAAGGGHGGGAGGGGHGGTSASSGGGGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRSSIGSDIKPTPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQSTAESKLCFDSGTHPSSTADALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVTVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFDLMSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIVNKKTVLEGHESVQAALLDYTLTCYPSVNDKFRRLLNILPEIHAMASRGEEYLYSKHCAGSAPTQTLLMEMLHAKRKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00587454;
- 90% Identity
- iTF_01557593;
- 80% Identity
- iTF_00579332;