Zorn002601.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zaprionus ornatus
Gene Symbol
Hr39
Assembly
GCA_018904035.1
Location
JAEIFZ010000002.1:20129645-20134568[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.7e+04 -6.7 8.8 52 103 104 155 19 226 0.60
2 3 1.3e-09 1.1e-05 25.0 0.0 1 26 294 319 294 331 0.87
3 3 5.5e-85 4.8e-81 273.2 1.4 90 408 337 619 319 619 0.91

Sequence Information

Coding Sequence
ATGCCCAACATGTCCAGCATTAAGACGGAGCAAGGCGTGTCCCCTGGCGGCAGCAGCAGCGGTAGTTACCACCAGTTGCCGGTGAACATGTCCACCACAATGACCTCATCGAGCAGCTCCACAACCACAACTCGTCACAATGTGTCTGTGACAAACATCAATGATCCCATCAATCTGAAGTATGAACCCGCTGCCGGCGTCGGTGTCTGCGATCGCAGCAAATCCTCAAGCGGTGGCCATCTGCCACTGTTGCCCGCCAATCCGAGTCCAGATTCTGCCATACATTCCGTCTACACGCACAGCAGCCCATCGCAGTCGCCCCTGACGTCGCGTCACGCCCCCTACACGCCCTCGCTGAGCCGCAACAACAGCGATGCATCGCACAGCAGCTGCTATAGCTATAGCTCCGAGTTCAGTCCCACCCATTCACCCATCCAGGCACGTCATGCTCCACCAGCCGGTTCAGCACTGTTTCCGGGCGGCAGCGCAGCCGCCAATGGATTACTCTACAGGCCGCTCAACGTGGATGCTGCTGCCGCAGCGGCGCAGGAGGCACAAAATCTCAGCATGGATGCAAGTGGTGCAGGTGCAGGCTCCACCCAACTGGATGCCACTGCTGCGCTGCCTGCCTCCCCGGCAGGCATCTCACGGCAACAACTGATCAATTCACCCTGCCCCATTTGTGGTGATAAGATCAGTGGCTTCCATTACGGCATCTTCTCCTGCGAATCCTGCAAGGGTTTCTTCAAACGCACCGTACAGAATCGCAAGAACTATGTGTGCGTGCGTGGAGGTCCCTGCCAGGTGAGCATCTCCACGCGCAAGAAGTGCCCCGCCTGCCGTTTCGAAAAGTGCCTGCAGAAAGGCATGAAACTGGAGGCCATACGAGAGGATCGCACACGTGGCGGACGTTCGACCTATCAATGCTCTTACACGTTGCCCAATTCCATGCTCACGAGTCCCAGTCTGGGTGCATCCATTAAAACAGAGCAGACTGAACCGCTCAATCATCACGCTTCGCGTGCCTCAAGCATTCCAGCCCTGCTGCAGGAAATCATGGATGTTGAACATCTCTGGCAATACACAGATGCAGAACTGGCGCGCATCAATCAACCTTTGTCCTCATTTGCTAGCGGCGGCGGCTCTACGTCGGGCTCCACGGCGGGCAATGCAACGGGTGCGAGTGGCACAGCCAGTGGTGCCAGTGCCCAACAGATGACCAATCCACTGCTGGCCAGTGCGGGTCTGTCATCCAATGGGGAGAATGCCAATCCCGATCTGATTGCCCATCTCTGCAACGTGGCCGATCATCGACTGTACAAGATTGTCAAATGGTGCAAGAGTTTGCCGCTCTTCAAGAACATCTCGATCGACGATCAGATCTGCCTGCTCATCAATTCATGGTGCGAGTTGTTGCTCTTCTCCTGCTGCTTTCGTTCCATTGACACGCCTGGGGAGATTAAGATGTCACAGGGTCGAAAGATTACGCTGGCACAAGCCAAAACCAATGGACTGCAGGCCTGCATTGAGCGCATGTTGAATCTGACCGATCATTTGCGACGTTTACGCGTTGATCGCTACGAATATGTTGCCATGAAGGTAATCGTGCTGCTGCAGTCTGACACCACAGAGCTGCACGAGGCGGTCAAGGTGCGCGAGTGCCAGGAGAAGGCGCTGCAGGGACTGCAGGCTTATACGCTAGCTCATTATCCCGATACGCCGTCCAAGTTTGGTGAGCTGCTGTTGCGCATACCCGATCTGCAGCGCACGTGTCAGTTGGGTAAGGAAATGTTAACGATCAAGACGCGCGACGGCGCCGACTTCAATTTGCTGATGGAGCTGCTACGCGGAGAACATTGA
Protein Sequence
MPNMSSIKTEQGVSPGGSSSGSYHQLPVNMSTTMTSSSSSTTTTRHNVSVTNINDPINLKYEPAAGVGVCDRSKSSSGGHLPLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGSALFPGGSAAANGLLYRPLNVDAAAAAAQEAQNLSMDASGAGAGSTQLDATAALPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLTSPSLGASIKTEQTEPLNHHASRASSIPALLQEIMDVEHLWQYTDAELARINQPLSSFASGGGSTSGSTAGNATGASGTASGASAQQMTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLAQAKTNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELHEAVKVRECQEKALQGLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRDGADFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01559808;
90% Identity
iTF_01557609; iTF_01548884; iTF_01548903; iTF_01554013; iTF_01553995;
80% Identity
iTF_01557609;