Zafr008888.1
Basic Information
- Insect
- Zaprionus africanus
- Gene Symbol
- Hr39
- Assembly
- GCA_018151435.1
- Location
- JAECXB010001253.1:3223790-3227536[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.2 1.1e+03 -1.4 0.2 131 160 33 62 17 89 0.47 2 5 1.3 7.1e+03 -4.1 6.5 32 157 45 168 32 187 0.51 3 5 0.33 1.7e+03 -2.1 2.8 52 111 133 192 117 216 0.75 4 5 0.016 86 2.2 0.4 1 10 320 329 320 332 0.93 5 5 1.3e-84 7e-81 272.6 0.8 91 408 349 634 331 634 0.88
Sequence Information
- Coding Sequence
- ATGCCCAACATGTCCAGCATCAAGACGGAGCAGGGCGTCTCCCCTGGCGGCAGCAGCAGCGGTAGTTACCACCAGTTACCGGTGAACATGTCCACCACGATGACCTCAACGAGCAGCTCGACGACCACAACCCGTCACAATGTGTCCGTGACGAACATCAAGTGCGAGTTGGAGGATCAGTTGCCGCAGACGCCAAACGGGAATCATCTGGTGCCTGTGATAGCCAACTATCTGGCGCCCACGCAAAGTGATCCCATCAATCTGAAGTATGAACCCGCTGTCGGCGTCGGCGTTTGCGATCGCAGCAAATCCTCAAGCGGTGGCCACCTGCCACTGTTGCCCGCCAATCCGAGTCCAGATTCTGCCATACATTCCGTCTACACGCACAGCAGCCCATCGCAGTCGCCACTGACGTCACGCCACGCCCCCTACACGCCCTCGCTGAGTCGCAACAACAGCGATGCGTCGCACAGCAGCTGCTACAGCTATAGCTCCGAGTTCAGTCCCACCCATTCACCCATCCAGGCACGTCATGCTCCACCCGCCGGTTCAGCTTTGTTTCCCGGCGCCAGCGCAGCCGGCAATGGATTGCTCTACAGGCCACTTAATGTAGATGCAGCGGCGCAGGAGGCGCAAAATCTCAGCATGGATGGAAGCGGTGCAGGTGCAGGCTCCACCCAACTGGATGCCACAGCTGCGCTGCCTGCCTCCCCGGCGGGCATCTCACGACAACAGCTCATCAACTCGCCCTGCCCCATTTGTGGTGATAAGATCAGTGGCTTCCATTACGGCATCTTCTCCTGCGAATCCTGCAAGGGTTTCTTCAAGCGCACCGTACAGAATCGCAAGAACTATGTGTGCGTACGTGGAGGTCCCTGTCAGGTGAGCATCTCCACGCGCAAGAAGTGTCCCGCTTGCCGGTTCGAGAAGTGCCTGCAGAAGGGCATGAAACTGGAGGCCATCAGGGAGGATCGTACACGTGGCGGTCCGAGTCCCAGTCTGGGTGCATCCATCAAAACGGAGCAGACAGAGCCACTCAATCATCACGCGTCGCGTGCCTCAAGCATTCCAGCCCTGCTGCAGGAAATCATGGATGTTGAACATCTCTGGCAGTACACAGATGCGGAACTGGCGCGCATCAATCAACCTTTGTCCTCATTTGCCAGCAGCGGCGGCGGCGGCTCCACGTCGGGCTCTACGACGGGCAATGCAACGGGTGCGGGTGCGGGTGGTGGCACAGCTGGTGCCAGTGCCCAACAGATGACCAATCCACTGCTGGCCAGTGCGGGTCTCTCATCCAATGGCGAGAATGCCAATCCCGATCTGATTGCCCATCTCTGCAATGTGGCCGATCATCGACTGTACAAGATTGTCAAATGGTGCAAGAGTTTGCCACTCTTCAAGAACATCTCGATCGACGATCAGATCTGCCTGCTCATCAACTCATGGTGCGAGCTGTTGCTCTTCTCCTGCTGCTTTCGTTCCATTGACACGCCTGGGGAGATCAAGATGTCGCAAGGTCGAAAGATCACGCTGGCACAAGCCAAAACCAATGGACTGCAGGCCTGCATTGAGCGCATGTTGAATCTGACCGATCATTTGCGACGTTTACGCGTTGATCGCTACGAATATGTTGCCATGAAGGTTATTGTGCTGCTGCAGTCCGACACCACAGAGCTGCACGAGGCGGTCAAGGTGCGCGAGTGCCAGGAGAAGGCGCTGCAGGGACTGCAGGCTTATACGCTGGCACATTATCCCGATACGCCGTCCAAGTTTGGTGAGCTGCTGTTGCGCATACCCGATCTGCAGCGCACGTGTCAGTTGGGTAAGGAAATGTTAACGATCAAGACACGCGACGGCGCCGACTTCAATTTGCTGATGGAGCTGCTACGCGGAGAACATTGA
- Protein Sequence
- MPNMSSIKTEQGVSPGGSSSGSYHQLPVNMSTTMTSTSSSTTTTRHNVSVTNIKCELEDQLPQTPNGNHLVPVIANYLAPTQSDPINLKYEPAVGVGVCDRSKSSSGGHLPLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGSALFPGASAAGNGLLYRPLNVDAAAQEAQNLSMDGSGAGAGSTQLDATAALPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGPSPSLGASIKTEQTEPLNHHASRASSIPALLQEIMDVEHLWQYTDAELARINQPLSSFASSGGGGSTSGSTTGNATGAGAGGGTAGASAQQMTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLAQAKTNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELHEAVKVRECQEKALQGLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRDGADFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01559808;
- 90% Identity
- iTF_01557592;
- 80% Identity
- iTF_01548903;