Zkol015872.1
Basic Information
- Insect
- Zaprionus kolodkinae
- Gene Symbol
- kn
- Assembly
- GCA_018901885.1
- Location
- JAEIFM010000242.1:248516-267954[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.36 2.9e+03 -4.0 0.3 491 497 32 38 12 66 0.47 2 2 6.2e-90 5e-86 289.1 0.0 38 182 148 292 122 292 0.92
Sequence Information
- Coding Sequence
- ATGTGCACAGTGTACCCCGCTCCGTGCTCCGTGCTTAGCCTCATCGCAATAGCAGCTCCGGCAGCAACAAACGCATCCACCACGGCTGCCACAATTGCAACTTCGCCCGCCGCGAGCAACTACTCGAAAGTGAGCGATTACCCGTACGCCGATCTCCACCAGCATCATCACTTCGCTAGCACAGCGCCCCTGACCAGCGGCGAAGGCTTCAAGCTGCGTTCCGAGGAGCCGGTGCCGGGCTTCAGCTCGGCCTCGCCGTGGCCCACGCTGGAGCTGGGTATGGAATGGGGACGTAAGCTATATCCCTCGGCGGGACCCAGATCCGCAGGCGGCCTCATGTTCGGTCTGCCCCCCTCGGCGGCGGACATGAACCAGCCCCGAGGTCCAATGACTTCCCTCAAGGAGGAACCCCTCGGCGCCGGACGTTGGGCCATGCAGCCCGTGGTCGATCAGACGAACCTGGGCATCGGCCGCGCCCACTTCGAGAAGCAGCCGCCCAGCAATTTGCGCAAGTCCAACTTCTTTCACTTTGTGATTGCGCTCTACGATCGCGCCGGACAGCCCATTGAGATCGAGCGTACCGCCTTCATTGGCTTCATCGAGAAGGACTCGGAATCGGACTCAACGAAAACCAACAATGGCATCCAGTATCGCCTGCAGTTGCTCTACGCTAATGGCGCTCGACAGGAGCAGGATATATTTGTGAGACTCATCGACTCGGTCACCAAAGCGGCCATCATCTACGAGGGGCAGGACAAGAACCCCGAGATGTGCCGTGTCCTGTTGACGCACGAAGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCGTCGGACCCCGTCATTATTGATCGGTAA
- Protein Sequence
- MCTVYPAPCSVLSLIAIAAPAATNASTTAATIATSPAASNYSKVSDYPYADLHQHHHFASTAPLTSGEGFKLRSEEPVPGFSSASPWPTLELGMEWGRKLYPSAGPRSAGGLMFGLPPSAADMNQPRGPMTSLKEEPLGAGRWAMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01558817; iTF_00579073; iTF_01570028; iTF_00476410; iTF_00541562; iTF_00495647; iTF_00544257; iTF_00586466; iTF_00534370; iTF_00831933; iTF_00550724; iTF_01557348; iTF_00529353; iTF_00494173; iTF_00904556;
- 90% Identity
- iTF_00476410;
- 80% Identity
- -