Basic Information

Gene Symbol
kn
Assembly
GCA_035045125.1
Location
JAWNNJ010002342.1:17969-44644[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.77 2e+03 -3.3 0.3 530 541 53 64 24 96 0.51
2 2 2.2e-89 5.6e-86 289.1 0.0 39 182 180 323 161 323 0.98

Sequence Information

Coding Sequence
ATGAGCTGGCGTGACAGGCAAACGAGATTAAAGCCCTTGCAATATTTTCACAGAAGTGCAAAAGAGATACCTAGATCCGCAGATCGGGTGACCCGTAGAACCCAGTTGACCCCGTGCTCAAGTGttgcaacaaccacaaccacaaccacaacaacaatcacaacaacaacattcacCACGGCTGCCACAATTGCCACCACGCCCGCCGCCTCCAACTACGCGAAAGTGAGCGATTACCCGTACGCTGATCTCCACCAGCACCATCACTTCGCTAGCACAGCGCCCCTGACCAGCGCCGACAGCTTCAAGCTGCGCTCCGAGGAGCCGGTGCCGGGCTTCAGCTCGGCCTCGCCGTGGCCCACGCTGGAGCTGGGCATGGAGTGGGGCCGCAAGCTTTACCCCTCCGCCGGGCCCCGATCGGCCGGGGGCCTCATGTTCGGCCTGCCGCCCTCTGCGGCGGACATGAACCAGCCCCGAGGCCCGATGACGTCCCTCAAGGAGGAGCCCCTCGGCGGCCGCTGGGCCATGCAGCCCGTTGTCGATCAGAGCAACCTGGGCATAGGCCGCGCCCACTTCGAGAAGCAGCCGCCCAGCAATTTGCGCAAGTCCAATTTCTTTCACTTTGTGATTGCGCTCTACGATCGCGCTGGCCAGCCCATTGAGATCGAGCGCACCGCATTCATTGGCTTCATTGAGAAGGATTCGGAATCGGATGCCACCAAGACCAATAACGGCATACAATATCGTCTGCAATTGCTTTATGCCAATGGTGCCCGACAGGAACAAGACATCTTTGTCAGACTCATCGACTCAGTGACGAAAGCGGCCATCATCTATGAGGGTCAGGACAAGAATCCGGAGATGTGCCGCGTACTGTTGACTCATGAGGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGGTAA
Protein Sequence
MSWRDRQTRLKPLQYFHRSAKEIPRSADRVTRRTQLTPCSSVATTTTTTTTTITTTTFTTAATIATTPAASNYAKVSDYPYADLHQHHHFASTAPLTSADSFKLRSEEPVPGFSSASPWPTLELGMEWGRKLYPSAGPRSAGGLMFGLPPSAADMNQPRGPMTSLKEEPLGGRWAMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01554473;
90% Identity
iTF_00476410;
80% Identity
-