Lsab002328.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- kn
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010000255.1:1-22967[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-67 5.7e-64 217.1 0.0 10 158 123 259 114 259 0.93
Sequence Information
- Coding Sequence
- ATGATTAGTTGGCTGACGGGCAAAGGACACGGGGCCAGAAACGTGCCCAGAACCGCCACCATCACGGCTACCTCACTTGTCACGacgccagcggccagcaactACGCGAAAGTGACCGACTATCCGTACGCCGATCTTCACCAGCATCATCACTTCGCTAACACAGCGCCCCTGACCAGCGCCGACAGCTTCAAGCTGCGTTCCGACGAGCCGGTGCCGGGCTTCAGCTCGGCCTCGCCCTGGCCAACCTTGGAGCTGGACTGGGGCCGGAAGTTGTACCCCACGGCTGGGCCGCGGTCGGCTGGGGGACTGATGTTTGGGCTGCCGCCCACGGCGGCGGATATGAACCAGCCGCGGGGACCGATGACGTCGCTCAAGGAGGAGCCGCTGGGCGCCCGGGCCTGGATGCAGCCCGTCGTCGACGATGCCAActTGGGCATTGGACGCGCCCACTTCgagaagcagccgcccagcaactTGAGGAAATCaaactttttccattttgtgaTCGCGCTCTACGATCGCGCGGGCCAGCCCATTGAGATCGAGCGCACGGCCTTCATCGGCTTCATCGAGAAGGGCTCCGAGTCCGATGCCACCAAGACCAACAACGGCATCCAATATCACCTCCAGCTGCTCTACGCGAATGGCGCCCGACAAGAACAGAAAATTTGCGTACGATTAATCGACTCGGTCACCAAACAGGCCATAATATACGAGGGCCAGGACAAGAACCCCGAAATGTGCCGAGTCCTGTTGACGCACGAAGTGATGTGCAG
- Protein Sequence
- MISWLTGKGHGARNVPRTATITATSLVTTPAASNYAKVTDYPYADLHQHHHFANTAPLTSADSFKLRSDEPVPGFSSASPWPTLELDWGRKLYPTAGPRSAGGLMFGLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVVDDANLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKGSESDATKTNNGIQYHLQLLYANGARQEQKICVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01554473;
- 90% Identity
- -
- 80% Identity
- -