Basic Information

Insect: Zaprionus davidi
Gene Symbol: su(Hw)
Assembly: GCA_018903715.1
Location: JAEIGL010000003.1:1718227-1721323[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00058 0.04 14.2 2.2 1 20 221 240 221 242 0.94

2 12 2.4e-06 0.00017 21.7 0.4 3 23 293 314 291 314 0.93

3 12 0.0082 0.57 10.6 0.1 1 23 320 342 320 342 0.97

4 12 4.7e-07 3.3e-05 23.9 2.4 1 21 349 369 349 370 0.95

5 12 2.8e-06 0.0002 21.5 0.6 2 23 382 403 381 403 0.96

6 12 9e-05 0.0063 16.8 5.3 1 23 414 436 414 436 0.99

7 12 7e-05 0.0049 17.1 0.9 1 23 442 464 442 464 0.97

8 12 1.4e-05 0.00098 19.3 0.8 1 23 470 492 470 492 0.99

9 12 1.3e-06 9e-05 22.6 3.0 1 23 498 520 498 520 0.98

10 12 6.1e-05 0.0043 17.3 1.2 1 23 524 546 524 546 0.97

11 12 0.0003 0.021 15.1 0.1 1 21 554 574 554 578 0.92

12 12 7.8e-05 0.0054 17.0 0.3 3 23 598 619 596 619 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00058	0.04	14.2	2.2	1	20	221	240	221	242	0.94
2	12	2.4e-06	0.00017	21.7	0.4	3	23	293	314	291	314	0.93
3	12	0.0082	0.57	10.6	0.1	1	23	320	342	320	342	0.97
4	12	4.7e-07	3.3e-05	23.9	2.4	1	21	349	369	349	370	0.95
5	12	2.8e-06	0.0002	21.5	0.6	2	23	382	403	381	403	0.96
6	12	9e-05	0.0063	16.8	5.3	1	23	414	436	414	436	0.99
7	12	7e-05	0.0049	17.1	0.9	1	23	442	464	442	464	0.97
8	12	1.4e-05	0.00098	19.3	0.8	1	23	470	492	470	492	0.99
9	12	1.3e-06	9e-05	22.6	3.0	1	23	498	520	498	520	0.98
10	12	6.1e-05	0.0043	17.3	1.2	1	23	524	546	524	546	0.97
11	12	0.0003	0.021	15.1	0.1	1	21	554	574	554	578	0.92
12	12	7.8e-05	0.0054	17.0	0.3	3	23	598	619	596	619	0.96

Sequence Information

Coding Sequence: ATGACAGACACAGCGGCCAGCACGACAGCAGCTGTGATCAAAATCGTCGACGTTGCAAAGATCGCGGCGCCCCCTAAGGAGAAACGAACGGGTGCACGCATGAAGCTACTAAACGATTTACAGCCCAAGGGAGGCGGAAAATCCTCCGTGAAGCAGGAGAAACGCACAAGTATCAAAATACTCAATAACAACGATGAGGCCACAACGGGAACGGGAACTCCCAAACCAGATCGCCGATCTACTGGAAAGACTTCTCTTAGCTCCACTAGTCCCGCAGGCAGTGTCAAGATATTAAATGAAAAACGAGCAGCTCCTGCTGCCAGCACGCCCGTTGAGACGGCAAAGATAAAGACATCGCCGAGCAAGAAAAAGAAAATGGATCATTACGTGCTGCAGGCTATAAAGAACGAGAACAGCGCCAAGGTGGACAACAAAACGTCGTCCACCATCGAGGTGGACGATGAAGATACCATTGACTTTATACTCGCCGAGAACGATGACATCGAATTGGCCCCGTCCAAGGGGGGCAACGACGATGAGTTTGTTGTCTCTGGCGTCGAGGAAGACGATGACGAGGATGACGATGGCGACGATACATTGGGTGAGGGCAGTGTCAATCGCACCAGCGGTACCAATAGTGACCTCAAGGAGATGGTGGAGCATGTGTGCGGTAAATGTTACAAAACATTCCGCCGCGTCAAGAGTCTGAAGAAACATCTTGAGTTCTGTCGCTATGACAGTGGTTATCACCTACGCAAGGCGGACATGCTTAAAAATCTGGAGAAGATCGAAAAGGATGCGGTTGTTATGGAGAAAAAAGACATTTGTTTCTGCTGCAGCGAGAGTTACGACACCTTCCACTTGGGCCACATTAACTGTCCGGATTGCCCCAAGTCGTTTAAGACTCAGACTAGCTATGAACGTCACATCTTCATCACCCACTCGGAGTTCAGTGACTACCCCTGCTCCATTTGCAATGCAAAACTGCGCAGCGCTGCCCTGCTAAAGTTGCACGAGCAGCAGCATCAGTCGCGAGGCAAACCCTATGCCTGCAAGATCTGTGGCAAGGATTTCACACGCTCCTACCATCTGAAGCGACATCAAAAGTACTCGTCGTGCTCGGCCAATGAGAACGATACTATGAGCTGCAAGGTGTGCGATCGTGTCTTCTATCGCTTGGACAATTTGCGTGCGCATCTCAAGCAGCATCTGGGTACGCAGGTGGTCAAGAAACCGGAGTATATGTGCCATGTGTGCAAGAACTGTTTCTACAGTCTCTCGACGCTCAACATACACATACGCACACACACGGGCGAGAAACCCTTCGATTGCGATCTGTGCGACAAGAAGTTCTCCGCCTTGGTGGCCCTAAAGAAGCATAGACGTTATCACACCGGCGAGAAGCCTTACACATGCACTGTTTGCAGTCAATCCTTTGCTGTCAAGGAGGTGCTCAATCGCCACATGAAGCGCCACACAGGCGAGCGTCCACACAAGTGCAATGAGTGCGGCAAAAGTTTCATTCAGGCCACACAGTTACGCACACATTCCAAGACGCATCTGCGTCCCTTCCCCTGCTCCCAGTGTGAGCAAAAATTCAAGACAGAGAAACAACTCGAACGCCATGTGAAGGATCATTCGCGCCAGAAGCGTCCCTCGTTTGCGTGCACTGAATGTACGCGTAGCTTCCGTACCGATGCATTGCTCAAGGAGCACATGGACGCCGGTGATCACTCGCCCATTAAACCCACGCGTGCTAAGCGCACAGCTAAGGTGATCGAGCGCACTGATTGCGCCATTTGTGACAAGAACTTTGATAGCACCGAAACCTTAAGGAATCACATACGCAACGTCCATGAATGTGATCCGGATGACATCTTTGGCACTGAGCCACCAGCGAAGCGTAAGACCAAGAAGTCTGTTGCGGCTGCCGTTGTAGTGCAACCAGATTCGGATGAGGAGGAGGAATCAGAGGCGGAAGAGATTCTGCCTACAACTGCCGCCAATACATCGGCAGGTTCGCTCATCTCAAGCAAAACAGATGATAATGGAGTCGTGGTGCGTGAATTTCTGGTGGATGAGGGCGATGGCAGTGCACAGACGATTGTGCTGGAAAATGAAGTGTACACCATATTGCCATTGGAAGGAACTGAAGAAGGAGCTGCTGCTGCACAGGCACCGGCATCCAAATCGCAGCCAGCGTCCAAGGAGAAAGAGAAGACCGTATCGCCGGTGGTTAAGAAGGAGCAGCGCAAATCACTGGCTGCCAGTTTGGCCGCTGCCATTGCCGACAATATCGAGGAACCCTCGAGCGATGATGACTTCAGCGGCGAGGTGCTCACCGAGGAAGATCTCAAGCTGAAGGAGAACATTGGCAAGCTAATCGATATGCTTGTTGATCCGCAAACTCTCAAGAAATATGGCTGGCCCAACAGCTCCGAGGAGACGGTGCTATGCAAGGTGATCGAGAACTGTGGCCACGATCTGGGCAAGGGAGCCGAGAACTACGCGGAGTTGGACTATGGTAATCGCATGCGCGAGTATTGCAAGTTACTCTTCACTGTGGTCATTCACAATGATTCCATCAAGTCGCTGCTTAACAATTTCCCCATCGACGATGTCATCGAGTATGTGCTAGGCGATGAGGATGCAGAACAAGATCAGGAGGAGCATGACAATGATTCGGAGAACGAGCAAGTGGGAGAGAAGGAGCTCGATGAGTCGCTCGATAAGTCGAAGGAGAAATCGAAATCGGATGCGGAGAAAACCAGAATAGAAACTATTGAAGTAGACGCTTAA
Protein Sequence: MTDTAASTTAAVIKIVDVAKIAAPPKEKRTGARMKLLNDLQPKGGGKSSVKQEKRTSIKILNNNDEATTGTGTPKPDRRSTGKTSLSSTSPAGSVKILNEKRAAPAASTPVETAKIKTSPSKKKKMDHYVLQAIKNENSAKVDNKTSSTIEVDDEDTIDFILAENDDIELAPSKGGNDDEFVVSGVEEDDDEDDDGDDTLGEGSVNRTSGTNSDLKEMVEHVCGKCYKTFRRVKSLKKHLEFCRYDSGYHLRKADMLKNLEKIEKDAVVMEKKDICFCCSESYDTFHLGHINCPDCPKSFKTQTSYERHIFITHSEFSDYPCSICNAKLRSAALLKLHEQQHQSRGKPYACKICGKDFTRSYHLKRHQKYSSCSANENDTMSCKVCDRVFYRLDNLRAHLKQHLGTQVVKKPEYMCHVCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYTCTVCSQSFAVKEVLNRHMKRHTGERPHKCNECGKSFIQATQLRTHSKTHLRPFPCSQCEQKFKTEKQLERHVKDHSRQKRPSFACTECTRSFRTDALLKEHMDAGDHSPIKPTRAKRTAKVIERTDCAICDKNFDSTETLRNHIRNVHECDPDDIFGTEPPAKRKTKKSVAAAVVVQPDSDEEEESEAEEILPTTAANTSAGSLISSKTDDNGVVVREFLVDEGDGSAQTIVLENEVYTILPLEGTEEGAAAAQAPASKSQPASKEKEKTVSPVVKKEQRKSLAASLAAAIADNIEEPSSDDDFSGEVLTEEDLKLKENIGKLIDMLVDPQTLKKYGWPNSSEETVLCKVIENCGHDLGKGAENYAELDYGNRMREYCKLLFTVVIHNDSIKSLLNNFPIDDVIEYVLGDEDAEQDQEEHDNDSENEQVGEKELDESLDKSKEKSKSDAEKTRIETIEVDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01551133; iTF_01557693; iTF_01558432; iTF_01554095; iTF_01552581; iTF_01555539; iTF_01550407; iTF_01556969; iTF_01559896; iTF_01548991; iTF_01553375; iTF_01554845;
90% Identity: iTF_01556969;
80% Identity: -