Zcap005356.1
Basic Information
- Insect
- Zaprionus capensis
- Gene Symbol
- Hr39
- Assembly
- GCA_018903675.1
- Location
- JAEIFN010001071.1:8917239-8921087[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.05 4.1e+02 -0.0 1.8 73 130 41 100 3 140 0.49 2 3 0.059 4.8e+02 -0.3 0.6 52 112 308 368 289 422 0.77 3 3 4.9e-91 4e-87 293.1 2.9 1 408 495 890 495 890 0.81
Sequence Information
- Coding Sequence
- ATGCCCAACATGTCCAGCATTAAGACGGAGCAGGGCGTCTCCCCTGGCGGCAGCAGCAGCAGCGGCAGTTACCACCAGTTGCCGGTGAACATGTCCAGCACGATGACCTCGACAAGCAGCTCCACGACCACAAGCCGTCACAATGTGTCCGTGACGAACATCAAGTGCGAGCTGGAGGATCAGTTGCCGCAGACGCCCAACGGGAATCATCTGGTGCCTGTGATAGCCAGCTACACGACGCATCCCCACAACAATCACAGCAGCAGCAATCACATCAATCACAACAATCACAGCAGCAACAGCAGCAGCCTGCGCATACCGCTGGGCGGGGGCGGTCAGGAGGAGGATGAGGAGTCCGACTCAGAGGCGGAGCTGGCGAATATTGAGAATCAAAAGGTGCGCAGACGTGGCACAGATAAGAACGGACCGCGTCCCATGTCCTGGGAGGGTGAACTGAGTGAAACGGAGACGGGGCCGCCGGGGGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAAGCTGGCGCCCACGCAAAGTGATCCCATCAATCTAAAGTATGAACCCGCTGTCGGCGTCGGCGTTTGCGATCGCAGCAAATCCTCAAGCGGTGGCCACCTGCCACTGTTGCCCGCCAATCCGAGTCCAGATTCTGCCATACATTCCGTCTACACGCACAGCAGCCCATCGCAGTCGCCACTGACGTCACGCCACGCCCCCTACACACCATCGCTGAGTCGCAACAACAGCGACGCATCGCACAGCAGCTGCTACAGCTATAGCTCTGAGTTCAGTCCCACCCACTCACCCATCCAGGCACGTCATGCCCCACCCGCCGGTTCAGCACTGTTTCCTGGCGCCAGCGCAGCCGGCAATGGTTTGCTCTACAGGCCGCTCAATGTGGATGCAGCGGCGCAGGAGGCGCAAAATCTCAGCATGGATGGAAGCGGTGCAGGTGCAGGCTCCACCCAACTGGATGCCACAGCTGCGCTGCCTGCCTCGCCAGCGGGCATCTCACGGCAACAGCTCATCAATTCACCCTGCCCCATTTGTGGTGATAAGATCAGTGGCTTCCATTACGGCATCTTCTCCTGCGAATCGTGCAAGGGCTTCTTCAAGCGCACCGTACAGAATCGCAAGAACTATGTGTGCGTACGCGGAGGTCCCTGTCAGGTGAGCATCTCCACGCGCAAGAAGTGCCCCGCCTGCCGCTTCGAGAAGTGCCTGCAGAAGGGCATGAAACTGGAGGCCATACGAGAGGATCGCACACGTGGCGGTCGTTCCACCTATCAATGCTCCTACACGTTGCCCAACTCGATGCTCAGTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCACTCTCTGCCAGCGAGTCCCAGTCTGGGTGCATCCATCAAAACGGAGCAGACAGAGCCGCTAAATCATCACGCGTCGCGTGCCTCAAGCATTCCAGCCCTGCTGCAGGAAATCATGGATGTTGAGCATCTCTGGCAATACACAGATGCGGAACTGGCGCGCATCAATCAACCTTTGTCCTCATTTGCCAGCGGCGGCGGCGGCGGCTCCACGTCGGGCTCTACGGCGGGCAATGCAACGGGTGGGGGTGGCACAGCTGGTGCCAGTGCCCAACAGATGACCAATCCACTGCTGGCCAGTGCGGGTCTCTCATCCAATGGCGAGAATGCCAATCCCGACCTGATTGCCCATCTCTGCAACGTGGCCGATCATCGACTGTACAAGATTGTCAAATGGTGCAAGAGTTTGCCGCTCTTCAAGAACATCTCGATCGACGATCAGATCTGCCTGCTCATTAATTCATGGTGCGAGCTGTTGCTATTTTCCTGCTGCTTTCGTTCCGTTGACACGCCTGGGGAGATCAAGATGTCGCAGGGTCGAAAGATCACGCTGGCACAAGCCAAAACCAATGGACTGCAGGCCTGCATTGAGCGCATGTTGAATCTGACCGATCATTTGCGACGTTTACGCGTTGATCGCTACGAATATGTTGCCATGAAGGTAATCGTGCTGCTGCAGTCCGACACCACAGAGCTGCACGAGGCGGTCAAGGTGCGCGAGTGCCAGGAGAAGGCGCTGCAGGGACTGCAGGCTTATACGCTGGCTCATTATCCCGATACGCCGTCCAAGTTTGGTGAGCTGCTGTTGCGCATACCCGATCTTCAGCGCACGTGTCAGTTGGGCAAGGAAATGTTAACGATCAAGACGCGCGACGGCGCCGACTTCAATTTGCTGATGGAGCTGCTACGCGGAGAACATTGA
- Protein Sequence
- MPNMSSIKTEQGVSPGGSSSSGSYHQLPVNMSSTMTSTSSSTTTSRHNVSVTNIKCELEDQLPQTPNGNHLVPVIASYTTHPHNNHSSSNHINHNNHSSNSSSLRIPLGGGGQEEDEESDSEAELANIENQKVRRRGTDKNGPRPMSWEGELSETETGPPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKLAPTQSDPINLKYEPAVGVGVCDRSKSSSGGHLPLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGSALFPGASAAGNGLLYRPLNVDAAAQEAQNLSMDGSGAGAGSTQLDATAALPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHSLPASPSLGASIKTEQTEPLNHHASRASSIPALLQEIMDVEHLWQYTDAELARINQPLSSFASGGGGGSTSGSTAGNATGGGGTAGASAQQMTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVDTPGEIKMSQGRKITLAQAKTNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELHEAVKVRECQEKALQGLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRDGADFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01551046; iTF_01553261; iTF_01553282; iTF_01550324; iTF_01550307; iTF_01552502; iTF_01552485; iTF_01559065; iTF_01559085; iTF_01554752; iTF_01554729;
- 90% Identity
- iTF_01551046; iTF_01553261; iTF_01553282; iTF_01550324; iTF_01550307; iTF_01552502; iTF_01552485;
- 80% Identity
- iTF_01551046;