Zcap012252.1
Basic Information
- Insect
- Zaprionus capensis
- Gene Symbol
- bab2
- Assembly
- GCA_018903675.1
- Location
- JAEIFN010000605.1:10639299-10641494[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-10 5.3e-07 29.1 0.0 1 44 427 470 427 471 0.91
Sequence Information
- Coding Sequence
- ATGGGGGGACCACAGCCTCCGGCACCGGTGGCACCAAGCAGCGAGGGGCAAACCTATTGCCTGCGCTGGAATAATCACCAGACGAACCTGGTGCAGATCCTGCACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTGGTGGATGATGAACAGTTCAAGGCACATCGCGTCGTCCTGGCAGCCAATTCGCCCTACTTTCAAGCGATTCTACAGGATGTGCCGCAGGATCAGTGCAGCATCATATTGCCGGGTGTGAAGGGCTTCGAGATCGCTGCCCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCAGAGATCCTGCGCACTGCCAAGGAGCTGCAGGTGAAGGGTCTCTATGATAACCTCATGAAGTTCAATCACAAAGCAGCTGCTGCTGCCGAGGAGCGCTCACAGAATCATCAGTTCCAGGGCAGCACCGCAGCAGGTGGACCACATCACCTGCACCACCACGCGGCACCCACCTCCAGCTGCAGTTCGAGTGGCAAACCACATAATGGCGACGGTGTCTCTAGAGCGGATGCCGGCTATGCTGGTGGTCATCATCATCATCACAACTCCTCCTCGGTGATCTCAACATCCACACACGCCTCGCCCAGCGCCGCCATCTCGAGCAGCTGCTCGCCACCGCCACCGCCCTTTGGGCACGCCTATCAACCGCCATACACGAGTTTCCCCTCCGCCTCCGCCTCGGGCGTTCCCCTGAATATCAATGCACACATTCCCGCTGGCGAGGCCCCACTGACGCCCACACACTCCACGCCCCATCATGCCGCCGGCGAGGCTGGCCAGTGGCCACTGTCGCCCTCGGCTGCCACAGCCGCTGCCATGCTGACCTCCGTCTACGACTCTGCTGCCGACATGAATCCTCTCAAGCGCAAGAAGCTCTCGGCCATCTCGAGCATGTTGTTCAGCCCACGCGACACGCCCATCTTGCGCAATGTGCTGGCCAATCCCGCGGACTCCTCCCAGCCCAATCCCCTGCTGCTGCCGTCGAAGAACTCCGCCGAGAAGACGCCCACACATCAGCAGCTCTCCAGCTCTGGCCATGGCAGTGGCGGAGGAGGAGGAGGTGGCAGCGCTGTCGGCGCTGGCAGTCACAGCTTCAACGGCTCCGACTATGGCGGCGACAAGGAACCCCTCTCCCCCCACACAGATCGCTCGTTCGACGACGAGACTGGCGGCGGCGGCGGTGGGGGCAAGAAGCCCGAGTGGAAGCGGTACAAGCAATACACACGCGCCGACATGATGTGCGCCATCCAGTGCGTGCGGGAGGGCATGAGTGCTCTGCAGGCCAGTCGCAAGTTCGGCCTGCCCAGCCGCACGCTGTACGACAAGGTGCGCAAGCTGAACATCACCACGGGACGTGGCACCCACCGTACGCCCAAGCGCAGCCCGCCAGGCGAATCCTCGGCAGCGTTTCCCTATTCCGCAGCAGCTGCAGCGGCGGCAGCAGCGCATAATTATGGCCAGACAGAGCTGGATCGCGAGCCCAAGGAACATGGTGCAGGCGCGCCGGGAGCGGGCCCTGCTGGACCAGGTCATGGACATGGTCATCATGGCATGCCGCCCACAATTCCACACTCGGCAGCGGCGCTGCTGGATCACGCGTTCCTGCAGCAGGCCCTGGAGAATCGCGGCGGCGACATTGCCGGCCGTGAGGCACTGCATGCCATGGCACTGGCAGCAGCGGCCCATGCTGCCGCCAATCGCATGTCCAGCAGTCCGCCAGGCTCGAATGGACATGCGGCGGCACGTGGCGTCTCGCCCGTGCATCATCACTACGGGGAGGAGAAGCACGCGGGGCATCAGGCCATCATCAAGCGCGAAGCCATTGAGGATGAGCGCGATGCTGACGATGAGGATGATCATGATCAGGTGGAGGATTTGTCGCTGCAACGTAAGGAGCGACCCGAGTCGCCCTACTCGCCTCCTCCGCCACGTGCTGCATCGCCACTGGAGAGCGCCAGCGTCATTATGCACTCCTCGTCCACCAATGGTGGCAAGGAGCAGCACAGCGAAATGGAGCAGGAGCAGGAGCATGAGGAGCGCGATGACTATGGCAGCGAGGATGGGCTCAAGCGGGAGCGGAGCGAGCAGCAGCTGCTGGCCAGCGATGAGGCAGAGGCTCAGGCCCAGCGCACTGACTGA
- Protein Sequence
- MGGPQPPAPVAPSSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAAAAAEERSQNHQFQGSTAAGGPHHLHHHAAPTSSCSSSGKPHNGDGVSRADAGYAGGHHHHHNSSSVISTSTHASPSAAISSSCSPPPPPFGHAYQPPYTSFPSASASGVPLNINAHIPAGEAPLTPTHSTPHHAAGEAGQWPLSPSAATAAAMLTSVYDSAADMNPLKRKKLSAISSMLFSPRDTPILRNVLANPADSSQPNPLLLPSKNSAEKTPTHQQLSSSGHGSGGGGGGGSAVGAGSHSFNGSDYGGDKEPLSPHTDRSFDDETGGGGGGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGESSAAFPYSAAAAAAAAAHNYGQTELDREPKEHGAGAPGAGPAGPGHGHGHHGMPPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAAARGVSPVHHHYGEEKHAGHQAIIKREAIEDERDADDEDDHDQVEDLSLQRKERPESPYSPPPPRAASPLESASVIMHSSSTNGGKEQHSEMEQEQEHEERDDYGSEDGLKRERSEQQLLASDEAEAQAQRTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01551081; iTF_01553892; iTF_01552535; iTF_01552381; iTF_01554047; iTF_01551656; iTF_01551813; iTF_01559689; iTF_01559842; iTF_01558411; iTF_01558217; iTF_01548781; iTF_01548940; iTF_01555341; iTF_01555491; iTF_01557489; iTF_01557643; iTF_01559121; iTF_01558958; iTF_01553109; iTF_01553314; iTF_01556758; iTF_01556930; iTF_01550208; iTF_01550358;
- 90% Identity
- iTF_01551656;
- 80% Identity
- iTF_01551081;