Zvit005390.1
Basic Information
- Insect
- Zaprionus vittiger
- Gene Symbol
- bab2
- Assembly
- GCA_018904025.1
- Location
- JAEIFQ010000344.1:10902213-10904468[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-10 4.8e-07 29.2 0.0 1 44 432 475 432 476 0.91
Sequence Information
- Coding Sequence
- ATGGGGGGACCACAGCCTCCGGCACCGGTGGCACCAAGCAGCGAGGGGCAAACCTATTGCCTGCGCTGGAACAATCATCAGACGAACCTGGTGCAGATCCTGCACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTGGTGGATGATGAACAGTTCAAGGCACATCGCGTCGTCCTGGCCGCCAATTCGCCCTACTTTCAGGCCATTCTACAGGATGTGCCGCAGGATCAGTGCAGCATCATATTGCCGGGTGTGAAGGGCTTCGAGATCGCTGCCCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCAGAGATCCTGCGCACTGCCAAGGAGCTGCAGGTGAAGGGTCTCTACGATAACCTCATGAAGTTCAATCACAAAGCAGCTGGCGCTGCCGAGGAGCGCTCACAGAATCATCAGTTCCAAGGCAGCACCGCAGCAGGTGGTGCAGTGGGGGGTCATCCACATCATCTGCACCATCATGCGGCACCCACCTCCAGCTGCAGTTCGAGCGGCAAACCACATAATGGCGACAGTGTCTCTAGAGCGGATGCCGGCTATGGTGGTGGTCATCATCATCATCACAACTCCTCCTCGGTGATCTCAACATCCACACACATTTCGCCCAGCGCCGCCATCTCGAGCAGCTGCTCGCCACCGCCACCGCCCTTTGGGCACGCCTATCAACCGCCATACACAAGTTTCCCCGCCTCCGCCTCGGGCGTTCCCTTGAATATCACACATGCACACATTCCCGCCGGCGAGGCCCCACTGACGCCCACACACTCCACGCCCCATCATGCTGCCGGCGAGGCTGGCCAGTGGCCACTGTCGCCCTCGGCTGCCACAGCCGCTGCCATGCTGACCTCCGTCTATGACTCTGCTGCCGACATGAATCCTCTCAAGCGCAAGAAACTCTCGGCCATCTCGAGCATGTTGTTCAGCCCACGCGACACTCCCATCTTGCGCAATGTGCTGGCCAATCCGGCAGACTCCTCCCAGCCCAATCCCCTGCTGCTGCCGTCGAAGAACTCCGCCGAAAAGACGCCCACACATCAGCAGCTCTCCAGCACTGGCCATGGCAGTGGAGGAGGTGGTGGCAGTGCTGTTGGCGCTGGCAGTCACAGCTTCAATGGCTCCGACTATGGCGGCGACAAGGAGCCCCTATCCCCCCACACAGATCGTTCGTTCGACGACGAGACTGGCGGCGGCGGCGGCGGCGGTGGGGGCAAGAAGCCCGAATGGAAGCGGTACAAGCAATACACACGCGCCGACATGATGTGCGCCATCCAGTGCGTGCGGGAGGGCATGAGTGCTCTGCAGGCCAGTCGCAAGTTCGGCCTGCCCAGCCGCACGCTGTACGACAAGGTGCGCAAGCTGAACATCACCACAGGACGTGGCACCCACCGTACGCCCAAGCGCAGCCCACCGGGTGAATCCTCGGCAGCGTTTCCATATTCCGCAGCAGCGGCAGCGGCGGCAGCAGCGCATAACTATGGCCAGACAGAGCTGGATCGCGAGCCCAAGGAGCATGGTGGGGGCGCGCCGGGAGCGGGGCCAGCTGGATCAGTTGGACATGGTCATCATGGCATGCCGCCCACAATTCCACACTCGGCAGCAGCGCTGCTGGATCACGCGTTCCTACAGCAGGCCCTGGAGAATCGTGGCGGCGACATTGCCGGCCGTGAGGCACTGCATGCCATGGCGCTGGCAGCGGCTGCCCATGCTGCCGCCAATCGCATGTCCAGCAGTCCGCCAGGCTCGAATGGACATGCGGCGGCGCGGGGCGTCTCTCCCATTCATCACTACGGGGAGGAGAAGCACGCGGGGCATCAGGCCATCATTAAGCGCGAAGCCATTGAGGATGAGCGCGATGCTGATGATGAGGATGATCATGATCAGGTGGAGGATCTGTCGCTGCAACGTAAGGAGCGACCCGAGTCGCCCTACTCGCCACCTCCGCCACGTGCCGCATCGCCGCTGGAGAGCGCCAGCTATGCGGCCGATGATAGCCACGATTCCATATTCTAG
- Protein Sequence
- MGGPQPPAPVAPSSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAAGAAEERSQNHQFQGSTAAGGAVGGHPHHLHHHAAPTSSCSSSGKPHNGDSVSRADAGYGGGHHHHHNSSSVISTSTHISPSAAISSSCSPPPPPFGHAYQPPYTSFPASASGVPLNITHAHIPAGEAPLTPTHSTPHHAAGEAGQWPLSPSAATAAAMLTSVYDSAADMNPLKRKKLSAISSMLFSPRDTPILRNVLANPADSSQPNPLLLPSKNSAEKTPTHQQLSSTGHGSGGGGGSAVGAGSHSFNGSDYGGDKEPLSPHTDRSFDDETGGGGGGGGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGESSAAFPYSAAAAAAAAAHNYGQTELDREPKEHGGGAPGAGPAGSVGHGHHGMPPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAAARGVSPIHHYGEEKHAGHQAIIKREAIEDERDADDEDDHDQVEDLSLQRKERPESPYSPPPPRAASPLESASYAADDSHDSIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01550925;
- 90% Identity
- iTF_01551656;
- 80% Identity
- iTF_01559842;