Znig011980.1
Basic Information
- Insect
- Zaprionus nigranus
- Gene Symbol
- bab2
- Assembly
- GCA_018903425.1
- Location
- JAEIGD010000006.1:5255099-5257394[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-10 6.1e-07 29.3 0.0 1 44 379 422 379 423 0.91 2 2 7 2.1e+04 -5.1 1.3 4 15 530 541 530 543 0.72
Sequence Information
- Coding Sequence
- ATGGGGGGGACCACAGCCTCCGGCACCGGTGGCACCAAGCAGCGAGGGGCAAACCTATTGCCTGCGCTGGAACAATCATCAGACGAACCTGATGATGAACAGTTCAAGGCACATCGCGTCGTCCTGGCCGCCAATTCGCCCTACTTTCAGGCCATTCTACAGGATGTGCCGCAGGATCAGTGCAGCATCATATTGCCGGGTGTGAAGGGCTTCGAGATCGCTGCCCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCAGAGATCCTGCGCACTGCCAAGGAGCTGCAGGTGAAGGGTCTCTACGATAACCTCATGAAGTTCAATCACAAAGCAGCTGGTGCTGCCGAGGAGCGCTCACAGAATCATCAGTTCCAAGGCAGCACCGCAGCAGGTCCACATCACCTGCACCATCACGCGGCACCCACCTCCAGCTGCAGTTCGAGCGGTAAGCCACATAATGGCGACGGTGTCCCTAGAGCGGATGCCGGCTATGGTCATCATCATCACAACTCCTCCTCGGTGATCTCAACATCCACACACATCTCGCCCAGCGCCACCATCTCGAGCAGCTGCTCGCCACCGCCACCGGCCTTTGGGCACGCCTATCAACCGCCATACACAAGTTTCCCCTCCGCCTCCGCCTCCGCCTCCGCCTCGGGCGTTCCCTTGAATGCACACAATGCACACATTCCCGCTGGCGAGGCCCCACTGACGCCCACACACTCCACGCCCCATCATGCTGCCGGCGACGCTGCTGGCCAGTGGCCACTGTCGCCCTCGGCTGCCACAGCCGCTGCCATGCTGACCTCCGTCTATGACTCTGCTGCTGGCGACATGAATCCTCTCAAGCGCAAGAAACTCTCGGCCATCTCGAGCATAACTCCGCCGAAAAGACGCCCACACATCAGCAGCAGCTCTCCAGCACTGGAGGAGGAGGTGCAGGTGGCAGTGCTGTTGGCGCTGGCAGTCACAGCTTCAATGGCTCCGACTATGGCGGCGACAAGGAGCCCCTATCCCCCCCACACAGATCTTTCGTTCGACGACGAGACTGGCGTCGGCGGCGGCGGCGGCGGTGGGGGCAAGAAGCCCGAATGGAAGCGGTACAAGCAATACACACGCGCCGACATGATGTGCGCCATCCAGTGCGTGCGGGAGGGCATGAGTGCTCTGCAGGCCAGTCGCAAGTTCGGCCTGCCCAGCCGCACGCTGTACGACAAGGTGCGCAAGCTGAACATAACCACAGGGCGTGGCACCCACCGTACGCCCAAGCGCAGCCCACCGGGTGAATCCTCGGCAGCGTTTCCCTATTCCGCAGCAGCGGCAGCGGCGGCAGCAGCGCATAACTATGGCCAGACAGAGCTCGTGGATCGCGAGCCCAAGGAGCATGGTGGGGGCCGGGCGCCGGGAGCGGGGCCAGGAGCGGCACCAGGTCATGGACATGGTCATCATGGCATGCCGCCCACAATTCCACACTCGGCAGCAGCGCTGCTGGATCACGCGTTCTTACAGCAGGCCCTGGAGAATCGTGGCGGCGACATTGCCGGCCGTGAGGCACTGCATGCCATGGCGCTGGCAGCGGCTGCCCATGCTGCCGCCAATCGCATGTCCAGCAGTCCGCCAGGCTCGAATGGACATGCGGCGGCGGCACGCGGAGTCTCTCCCGTTCCTCATCATCATCATCACTACGGAGGGGAGGAGAAGCACGCGGGGCATCAGGCCATCATTAAGCGGGAAGCCATTGAGGATGAGCGCGATGCTGATGATGAGGATGATCATGATCAGGTGGAGGATTTGTCGCTGCAACGTAAGGAGCGACCCGAGTCCCCCTACTCGCCACCTCCGCCACGTGCCGCATCGCCGCTGGAGAGCGCCAGCGTCATCATGCACTCCTCCTCGTCCACTAATGGTGGCAACAAGGAGCAGCAAACGAGGATGTATGCGGCCGATGATAGCCACGATTCCATATTCTAG
- Protein Sequence
- MGGTTASGTGGTKQRGANLLPALEQSSDEPDDEQFKAHRVVLAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAAGAAEERSQNHQFQGSTAAGPHHLHHHAAPTSSCSSSGKPHNGDGVPRADAGYGHHHHNSSSVISTSTHISPSATISSSCSPPPPAFGHAYQPPYTSFPSASASASASGVPLNAHNAHIPAGEAPLTPTHSTPHHAAGDAAGQWPLSPSAATAAAMLTSVYDSAAGDMNPLKRKKLSAISSITPPKRRPHISSSSPALEEEVQVAVLLALAVTASMAPTMAATRSPYPPHTDLSFDDETGVGGGGGGGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGESSAAFPYSAAAAAAAAAHNYGQTELVDREPKEHGGGRAPGAGPGAAPGHGHGHHGMPPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAAAARGVSPVPHHHHHYGGEEKHAGHQAIIKREAIEDERDADDEDDHDQVEDLSLQRKERPESPYSPPPPRAASPLESASVIMHSSSSTNGGNKEQQTRMYAADDSHDSIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01550925;
- 90% Identity
- iTF_01556930;
- 80% Identity
- iTF_01556930;