Zafr010957.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zaprionus africanus
Gene Symbol
-
Assembly
GCA_018151435.1
Location
JAECXB010002221.1:3818186-3828050[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1.4e-05 0.00094 19.4 2.1 1 23 93 115 93 115 0.97
2 18 4.5e-06 0.00031 20.9 0.4 1 23 121 143 121 143 0.97
3 18 0.00066 0.046 14.0 0.9 1 23 149 171 149 171 0.95
4 18 9.4e-06 0.00066 19.8 3.1 1 23 177 199 177 199 0.97
5 18 2.1e-05 0.0015 18.7 4.7 1 23 205 227 205 227 0.99
6 18 3.9e-05 0.0027 17.9 5.7 1 23 233 255 233 255 0.97
7 18 1.9e-07 1.3e-05 25.2 4.3 1 23 261 283 261 283 0.98
8 18 6.9e-08 4.8e-06 26.6 2.4 1 23 289 311 289 311 0.97
9 18 4e-05 0.0028 17.9 6.7 1 23 318 340 318 340 0.97
10 18 7e-05 0.0049 17.1 6.5 1 23 346 368 346 368 0.98
11 18 6.2e-06 0.00043 20.4 4.5 1 23 374 396 374 396 0.98
12 18 4.5e-06 0.00032 20.9 8.1 1 23 402 424 402 424 0.98
13 18 3.7e-06 0.00026 21.1 7.6 1 23 430 452 430 452 0.97
14 18 4.1e-07 2.9e-05 24.1 7.7 1 23 458 480 458 480 0.98
15 18 0.00013 0.009 16.3 9.5 1 23 486 509 486 509 0.95
16 18 4.6e-05 0.0032 17.7 0.9 1 23 515 537 515 537 0.98
17 18 0.0005 0.035 14.4 3.4 1 23 547 569 547 569 0.97
18 18 5.7e-06 0.0004 20.5 1.6 1 23 575 598 575 598 0.96

Sequence Information

Coding Sequence
ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCGGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCACCTTGGGCGGAGGACCACCCCCAATAGCGAGTAAAGTGAGCGGCGGACACGGCGATAATCATCATAATCATAAGGAGGACGGTAGCGGTAAACCGCCGCACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCACAGTTATTTACGTATCACGAAGTCTTTGATGGGACGCCCATAGCGACTGGTACGCATGTATGCGATATTTGTGGCAAGATGTTCCAATTTCGTTATCAGCTGATTGTGCACCGTCGCTACCACAGCGAGCGTAAGCCGTTCATGTGTCAGGTGTGCGGTCAGGGTTTTACCACATCCCAGGATTTAACCCGTCATGGTAAAATTCATATTGGCGGTCCCATGTTCACCTGCATTGTCTGCTTCAATGTGTTCGCAAATAATACAAGCCTGGAGCGGCATATGAAGCGACATTCGACAGATAAACCATTCGCCTGCACTATTTGCCAAAAGACTTTTGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCCCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGTGGCAAGAAATACACACGCAAGGAGCATCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGTGAGATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCACATCGGTGCGATTTCTGCTCCAAGACGTTTACGCGCAAGGAACATCTGTTAAATCACGTGCGTCAGCACACCGGGGAGTCGCCGCACCGCTGCTCGTACTGCATGAAGACGTTTACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACTCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACATACTGCACCAAGACGTTTACACGCAAGGAGCATTTGACGAATCATGTGCGTCAGCACACGGGCGATTCGCCGCATCGTTGCAGCTATTGCAAGAAGACCTTTACCCGCAAGGAGCATTTGACGAATCATGTTCGTCTCCATACAGGTGATTCGCCGCACAAATGTGAATACTGTCAGAAGACGTTTACGCGCAAGGAGCATCTCAATAATCATATGCGCCAACATTCGAGCGACAATCCCCATTGCTGCAATGTGTGCAACAAGCCGTTCACACGCAAGGAGCATCTGATCAATCATATGTCACGTTGCCACACCGGCGATCGTCCCTTCACCTGTGAGACTTGTGGCAAATCTTTCCCCCTCAAAGGCAATCTGCTATTCCATCAGCGCAGCCACACCAAGGGACAGGAGTGTGAGCGTCCGTTTGCCTGTGAGAAGTGCCCCAAGAATTTCATATGCAAAGGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGTGAGAAACCACACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCGTGCATCCGCATCCGCAAATACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCACTCGGCGACGACCACGATGCATACCATCCAACAGATAACAGCGGGCGCAGCAGCGGCTGGCGCCGGTGCCGTCCAGCTAACGCCAGGCCTGGTGCCGCTGTTGCAACATCTGCCCAGCAATGTAGAGCAGCATCCCGTGGTTTACTAA
Protein Sequence
MQHVSAASSAPSVVSAPVVTTGGGTTITLGGGPPPIASKVSGGHGDNHHNHKEDGSGKPPHGIEMYKVNIEDISQLFTYHEVFDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLTPGLVPLLQHLPSNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00599004;
90% Identity
iTF_01555537;
80% Identity
-