Yevo013823.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- -
- Assembly
- GCA_963969515.1
- Location
- OZ018353.1:19580713-19602122[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1e-09 9.1e-07 29.4 0.0 4 39 158 194 155 198 0.88 2 4 3e-11 1.3e-08 35.3 0.6 4 39 212 247 210 250 0.93 3 4 9.8e-15 4.3e-12 46.4 0.0 2 45 265 309 264 309 0.97 4 4 6.3e-17 2.7e-14 53.5 0.0 2 43 317 359 316 361 0.93
Sequence Information
- Coding Sequence
- ATGCCCGGCTACGGGTTGCCTCATGTGAAGTGCGAACCCCCATCTGAATCGGATGACGATGACAGCAATTCACAATTCCCGCAAAAGTTTCTCATACATCAGGAGAAGTCCTGTGCTCTGCTCTGCAGCGGGGTGTATGCTATTATACATATTTTGGGGCAGGAAGCGCCATGCCTGGAGGAACTGGGCGGGCCAGCGCCAGCCGCGCCATCCGCTACGCCCGTCTGCGTCAAACAGGAGCCCCTGGACGTCGCCGCCGCGTCACTCGAGACACTCGAGCCCGCGCCGCATACAAGTTCAGCGCTCCAGCTGTCGCTCATCAGTTCGAGTGAGCTCCAGGCGGAGTTCATGCCATTACTGGCCGTTAAAGATGAGCCCATCTCCGAAGAGCAGCACCAACTGAGCGGGTCTGACACAAGCGACTCATGCGGTGGCGATGCGGCCCGCAGCCCTAAGAGCTGGACCCAGAAAGACATGGAGAACGCACTCGACGCTCTGAAAACTCAAAACATGAGCCTGACCAAGGCGTCGGCCCGGTACGGCATCCCGTCGACGACGCTGTGGCAGCGGGCGCACCGGCTGGGCATCGACACGCCGAAGCGCGAGGGCGCCGCCAAGTCGTGGGCCGCCGCCGACCTGCGCGCCGCCCTGCACGCGCTGCGCGCCGGCGCCATCTCCGCCAACAAGGCCAGCAAGGCTTACGGCATCCCCAGCAGTACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGCCTCGCCGCGCCCTTCAACGCCGCGCCCACCAGCTGGCGGCACGAGGACCTCGACCGCGCCCTGCACGCCATACGGGCCGGACACGCCTCCGTGCAGCGCGCCTCCGCGCAGTTCGGGATCCCCACGGGCACGCTGTACGGGAGATGCAAACGCGAGGGCATTGAGCTATCCCGCTCCAACCCCACGCCGTGGTCCGAAAACGCTATGGGGGAGGCGCTAGAGGCTGTGAGAGTTGGTCAGATGTCGATAAATCAAGCTGCTATCCACTACAATCTGCCATATTCTTCTCTGTATGGTCGGTTCAAACGCTGCAAATATCCACAGAGTCCCCAGCAGCCGCACCAGCCGCCGCCGGAGCACCCCGAGCCGGAGCCGCAGTTCCCGCCCTACCAGCCCTACCCCCCCGCCCCGGGGCCGTCGCCGTACCCCCCGCACCCGCTGGGGGGGCACTCGCTGATGCCCCACGAGCCAGGCCCGGCGGGAGAGGAAATGGGGCACCAACTGGTGAGTGAGCAGTTCGCCATGTACTACGGACAGGGGATCGCCACCAGTTGA
- Protein Sequence
- MPGYGLPHVKCEPPSESDDDDSNSQFPQKFLIHQEKSCALLCSGVYAIIHILGQEAPCLEELGGPAPAAPSATPVCVKQEPLDVAAASLETLEPAPHTSSALQLSLISSSELQAEFMPLLAVKDEPISEEQHQLSGSDTSDSCGGDAARSPKSWTQKDMENALDALKTQNMSLTKASARYGIPSTTLWQRAHRLGIDTPKREGAAKSWAAADLRAALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWRHEDLDRALHAIRAGHASVQRASAQFGIPTGTLYGRCKREGIELSRSNPTPWSENAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYPQSPQQPHQPPPEHPEPEPQFPPYQPYPPAPGPSPYPPHPLGGHSLMPHEPGPAGEEMGHQLVSEQFAMYYGQGIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01546560;
- 90% Identity
- iTF_01544796;
- 80% Identity
- -