Basic Information

Insect: Xylota sylvarum
Gene Symbol: ECU03_0790_1
Assembly: GCA_905220385.1
Location: LR999957.1:103642206-103645517[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0013 0.15 13.1 0.2 2 23 105 127 104 127 0.96

2 20 0.00027 0.033 15.2 0.5 1 23 133 155 133 155 0.98

3 20 0.00016 0.019 16.0 0.4 2 23 164 185 164 185 0.97

4 20 0.00032 0.039 15.0 0.9 1 23 191 214 191 214 0.97

5 20 0.004 0.48 11.6 2.0 1 19 246 264 246 266 0.97

6 20 6.5e-07 7.8e-05 23.5 0.7 1 23 274 296 274 296 0.98

7 20 2e-05 0.0024 18.8 3.4 1 23 302 325 302 325 0.98

8 20 0.00063 0.076 14.1 2.2 1 23 335 358 335 358 0.96

9 20 4.8e-05 0.0057 17.6 2.3 5 23 453 471 450 471 0.94

10 20 9.1e-06 0.0011 19.9 0.1 1 23 477 499 477 499 0.98

11 20 0.00038 0.046 14.8 0.3 1 23 510 534 510 534 0.97

12 20 0.00059 0.071 14.2 0.8 1 20 540 559 540 561 0.94

13 20 1.3 1.6e+02 3.6 5.5 1 23 599 621 599 621 0.97

14 20 1.3e-05 0.0015 19.4 1.8 1 23 627 649 627 649 0.98

15 20 5.4e-06 0.00064 20.6 1.0 1 23 655 677 655 677 0.96

16 20 0.00013 0.015 16.3 2.7 1 23 683 705 683 705 0.97

17 20 3.3e-07 4e-05 24.4 0.4 2 23 801 822 801 822 0.98

18 20 1.9e-05 0.0023 18.9 0.9 1 23 828 850 828 850 0.97

19 20 2e-05 0.0024 18.8 0.4 1 23 857 879 857 879 0.98

20 20 0.00017 0.021 15.9 4.7 1 23 885 907 885 908 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0013	0.15	13.1	0.2	2	23	105	127	104	127	0.96
2	20	0.00027	0.033	15.2	0.5	1	23	133	155	133	155	0.98
3	20	0.00016	0.019	16.0	0.4	2	23	164	185	164	185	0.97
4	20	0.00032	0.039	15.0	0.9	1	23	191	214	191	214	0.97
5	20	0.004	0.48	11.6	2.0	1	19	246	264	246	266	0.97
6	20	6.5e-07	7.8e-05	23.5	0.7	1	23	274	296	274	296	0.98
7	20	2e-05	0.0024	18.8	3.4	1	23	302	325	302	325	0.98
8	20	0.00063	0.076	14.1	2.2	1	23	335	358	335	358	0.96
9	20	4.8e-05	0.0057	17.6	2.3	5	23	453	471	450	471	0.94
10	20	9.1e-06	0.0011	19.9	0.1	1	23	477	499	477	499	0.98
11	20	0.00038	0.046	14.8	0.3	1	23	510	534	510	534	0.97
12	20	0.00059	0.071	14.2	0.8	1	20	540	559	540	561	0.94
13	20	1.3	1.6e+02	3.6	5.5	1	23	599	621	599	621	0.97
14	20	1.3e-05	0.0015	19.4	1.8	1	23	627	649	627	649	0.98
15	20	5.4e-06	0.00064	20.6	1.0	1	23	655	677	655	677	0.96
16	20	0.00013	0.015	16.3	2.7	1	23	683	705	683	705	0.97
17	20	3.3e-07	4e-05	24.4	0.4	2	23	801	822	801	822	0.98
18	20	1.9e-05	0.0023	18.9	0.9	1	23	828	850	828	850	0.97
19	20	2e-05	0.0024	18.8	0.4	1	23	857	879	857	879	0.98
20	20	0.00017	0.021	15.9	4.7	1	23	885	907	885	908	0.96

Sequence Information

Coding Sequence: ATGCAAACCAATACAGATTTATTTACTCCACTACCAGTGGAAATGTCTACTCCAAATGCACTCCTCTACCAACTTAATGATTCCGCCGAGAAGTTCTTGAAGTCCAATGAGTTCTATGCCTTCGAGATGGATAGTTTCACTGTGCCGGAGATAGACTACATACCAACGGTTATATCCAGCTTAAGTCCAATTCCCGAGGAGGTGAGCTGTTCATTAAACGTACCGCCACTCGAGTCACTGTTCCCTCCAGTTGAACCGGCTGAACCTATACAGAAATTCCCAAAGGCAAGTCCGGTTCCAGTGAAACAGCTGCCGTGCGACTTGTGTTCGGAAACATTCTCATCGGCACAAGTATTGCGTTTGCACAGACGTGTCCAACACATCTCGACCAAGGAATTCCGGTGTCGTAAATGCCCAGCATCGTTCAACTTTGAATCGAATTTACTCCTCCATTTGGCTTCGCATGTTCCCAGTTGTAGTACGAACAATGAGTGTCCAGAGTGTAAAATGGTATTTAAACGTATTTCGGCGTTTAAGGGTCACCTTAAGTCACATCAGACAAGCGACCAATTCAAGTGCAATCGGTGTGACAAAGAATTCGACTTGAAGGGTTACTACGAGAAGCACTTGGCTAGGGCACACAAACCAGGAGCGGACGGCACGGTTGAAGAAATCCTCGCAAAAGTTGGCACCAGTGGAAGAAGCCGACAAAAATCTAAGAAATTACAAGGGAAATACGTCTGCCAAACATGCGAGAAACATTTTCCTAAGCCATGCTTACTGAAGCGTCATGAAGTTTGTCATAGTGGAGCGAAACCATTCCAATGCACAGAATGTGACCAAGGATTTACGCAAAAAACATCCTTAGCGAGGCATATGTTGCTACACCAGGGTGTTAAAGATTTCAAATGCCCCAAGTGCAACTGCAACTTTGCCCAGAAAAACAACCTTATTATGCACATTAAGCGCACCCATCCTATGCAGCCGAATTTAGATGAGATGTTCGCATGCGAACACTGTCCATGTGTGTTCACCAAATTGAACAGTGTCAACCGCCATATGGCTATGATGCACCCGAAGAGTGAAAATTCTGCTGATAACGATGGGTttaacgatgacgatgatgatagtGTGAATGTTGCTAAGGTAATGGAGCAGCTGAAGAGTTTTCAGGAGTCTATGGGCATTATGGATATGCAGCCACCAGCGTTGGAACTTTCACTAATGAAACCCCCATCGCCTGGACCTAAAGTACATACTGTAACGCTGGTTGATACTTTAAATCCGAAGAAGGAGAAGACTTATAAAGTTGTAAAGGAAATTCTGTATAAAGGACAACGAACGATGGCATGCATTTATTGCGATAAGCCTTTCAAAAGGCAATTCGACTTGCTGAGACACCATCGAACGCACACTAAGGAAAAGCCGTTCGAGTGCGAAATATGCCAAAAGAACTTTGCAACAAGTGCAGCAGTTAAAGTTCATATGAATATCCATCTGTCTTCCCAAGAACAGCCCCTAAAAGTCTATGCTTGCACTGCGGCCGAATGTGGAAAGCGATTCTCTTCTATGCGAAGATTAGACATTCACACAAGGACTCATACAAGTTCCATATCATATATTTGCCCTTTATGCTCGAAAACGTTCACATCCAAGGCCGGATTCTCTGCTCACAAACATCAAGAGGAGGATAAAGAGTTTGATACTGTTCGTCCACTCCTAATGTCTCCTGTTAAAGTTGAATCCAGTTCCATCGAAGAGGAACACAAGGCCGAAGAGTACGCTAAGAGAAACCATCAGTGTTGCGTCTGTGGTCTAAAAATGCAAAAGTTATCACATCTGAGACAGCACGAAGCTACTCACAAGGGAGAGAAACCTTTCAAGTGTGCCATTTGCTTTAGATCGTACACTACACAAAGTTCCCTCAACCTGCACTACAAGATCCACTCTGCCGAAAAGCCTCACATTTGTGACGTCTGCAATGCAAAATTCATAACACAATCTCTTCTCAAGCGACACATGATATCGCACAGTAATGAACGTAAATTCGCCTGCCCTTACTGTAGTGAACGTTTCAAAACTAGCGACAACTGCAAGAACCACATTCTAACGCATGCCCGCAATCTACTAGCAATGCCTGAACCTCAATTAACGGAGGAACACCTACAGACACCTGATGTTGCAGAACCTCATTCAGAAACTATCTCTCAGCCTTGTATCGCAGTGGTTCAAAGCCCTCAGAAGAACCTATCACCGAAGTTTATACAACTAGAGATGGTTAAGAACTGTAAAAAGCACAATCACAAGAATTTTACCATAGAAACGGTGGCCAATTCGTCGAAAAAGTCCTCAAAAAAATCTCTAGCACGATCTTTGAAACAAATAAGCCAGACTGGCCGCCAATGCGGTGAGTGTGGGAAAACTTTCTATAAAGCCAGTGACTTGGAACGCCATGCACGAACACACACAAAAGAGAAACCATTCGATTGCAACTCATGTCCGAAACGATTCGCTTTGAGGTCCACTCTGGTGCAGCATATGAAAACGCATGATACGCTAAGGGAGACCTATGATTGTCAGGTGTGCGGCAAGAAGTATACATCGAGAAAAGTTCTAATTGTTCATTTGAGAATTCACACCGGTGAGCGACCATTTCAGTGTGCTGTGTGCAAGAAGACCTTTAGAACTTCGGGGCATAAAATATCTCATATGAAGGCTCATCATAAAAAGAGAAAGTGA
Protein Sequence: MQTNTDLFTPLPVEMSTPNALLYQLNDSAEKFLKSNEFYAFEMDSFTVPEIDYIPTVISSLSPIPEEVSCSLNVPPLESLFPPVEPAEPIQKFPKASPVPVKQLPCDLCSETFSSAQVLRLHRRVQHISTKEFRCRKCPASFNFESNLLLHLASHVPSCSTNNECPECKMVFKRISAFKGHLKSHQTSDQFKCNRCDKEFDLKGYYEKHLARAHKPGADGTVEEILAKVGTSGRSRQKSKKLQGKYVCQTCEKHFPKPCLLKRHEVCHSGAKPFQCTECDQGFTQKTSLARHMLLHQGVKDFKCPKCNCNFAQKNNLIMHIKRTHPMQPNLDEMFACEHCPCVFTKLNSVNRHMAMMHPKSENSADNDGFNDDDDDSVNVAKVMEQLKSFQESMGIMDMQPPALELSLMKPPSPGPKVHTVTLVDTLNPKKEKTYKVVKEILYKGQRTMACIYCDKPFKRQFDLLRHHRTHTKEKPFECEICQKNFATSAAVKVHMNIHLSSQEQPLKVYACTAAECGKRFSSMRRLDIHTRTHTSSISYICPLCSKTFTSKAGFSAHKHQEEDKEFDTVRPLLMSPVKVESSSIEEEHKAEEYAKRNHQCCVCGLKMQKLSHLRQHEATHKGEKPFKCAICFRSYTTQSSLNLHYKIHSAEKPHICDVCNAKFITQSLLKRHMISHSNERKFACPYCSERFKTSDNCKNHILTHARNLLAMPEPQLTEEHLQTPDVAEPHSETISQPCIAVVQSPQKNLSPKFIQLEMVKNCKKHNHKNFTIETVANSSKKSSKKSLARSLKQISQTGRQCGECGKTFYKASDLERHARTHTKEKPFDCNSCPKRFALRSTLVQHMKTHDTLRETYDCQVCGKKYTSRKVLIVHLRIHTGERPFQCAVCKKTFRTSGHKISHMKAHHKKRK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00389797;
90% Identity: iTF_01541590;
80% Identity: -