Basic Information

Insect: Xylota segnis
Gene Symbol: ECU03_0790
Assembly: GCA_963583995.1
Location: OY757237.1:73882795-73885903[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0042 0.32 11.6 0.1 2 23 105 127 104 127 0.96

2 20 0.00025 0.019 15.4 0.8 1 23 133 155 133 155 0.98

3 20 0.00034 0.026 15.0 0.3 2 23 164 185 164 185 0.97

4 20 0.00032 0.024 15.1 0.7 1 23 191 214 191 214 0.96

5 20 0.00051 0.039 14.4 1.8 1 19 246 264 246 266 0.97

6 20 1.1e-06 8.1e-05 22.9 1.2 1 23 274 296 274 296 0.98

7 20 5.3e-06 0.0004 20.7 3.4 1 23 302 325 302 325 0.98

8 20 0.00065 0.05 14.1 2.2 1 23 335 358 335 358 0.96

9 20 5e-06 0.00038 20.7 2.7 3 23 451 471 449 471 0.97

10 20 1.5e-05 0.0011 19.3 0.1 1 23 477 499 477 499 0.98

11 20 9.9e-05 0.0075 16.7 0.3 1 23 510 534 510 534 0.96

12 20 0.00086 0.065 13.7 1.2 1 20 540 559 540 561 0.94

13 20 1.4 1e+02 3.6 5.5 1 23 599 621 599 621 0.97

14 20 2.2e-06 0.00017 21.9 1.9 1 23 627 649 627 649 0.99

15 20 2.6e-06 0.0002 21.6 1.3 1 23 655 677 655 677 0.97

16 20 0.00013 0.0099 16.3 2.7 1 23 683 705 683 705 0.97

17 20 3.5e-07 2.6e-05 24.4 0.4 2 23 801 822 801 822 0.98

18 20 2e-05 0.0015 18.9 0.9 1 23 828 850 828 850 0.97

19 20 1.3e-05 0.00097 19.5 0.4 1 23 857 879 857 879 0.98

20 20 0.00018 0.013 15.9 4.7 1 23 885 907 885 908 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0042	0.32	11.6	0.1	2	23	105	127	104	127	0.96
2	20	0.00025	0.019	15.4	0.8	1	23	133	155	133	155	0.98
3	20	0.00034	0.026	15.0	0.3	2	23	164	185	164	185	0.97
4	20	0.00032	0.024	15.1	0.7	1	23	191	214	191	214	0.96
5	20	0.00051	0.039	14.4	1.8	1	19	246	264	246	266	0.97
6	20	1.1e-06	8.1e-05	22.9	1.2	1	23	274	296	274	296	0.98
7	20	5.3e-06	0.0004	20.7	3.4	1	23	302	325	302	325	0.98
8	20	0.00065	0.05	14.1	2.2	1	23	335	358	335	358	0.96
9	20	5e-06	0.00038	20.7	2.7	3	23	451	471	449	471	0.97
10	20	1.5e-05	0.0011	19.3	0.1	1	23	477	499	477	499	0.98
11	20	9.9e-05	0.0075	16.7	0.3	1	23	510	534	510	534	0.96
12	20	0.00086	0.065	13.7	1.2	1	20	540	559	540	561	0.94
13	20	1.4	1e+02	3.6	5.5	1	23	599	621	599	621	0.97
14	20	2.2e-06	0.00017	21.9	1.9	1	23	627	649	627	649	0.99
15	20	2.6e-06	0.0002	21.6	1.3	1	23	655	677	655	677	0.97
16	20	0.00013	0.0099	16.3	2.7	1	23	683	705	683	705	0.97
17	20	3.5e-07	2.6e-05	24.4	0.4	2	23	801	822	801	822	0.98
18	20	2e-05	0.0015	18.9	0.9	1	23	828	850	828	850	0.97
19	20	1.3e-05	0.00097	19.5	0.4	1	23	857	879	857	879	0.98
20	20	0.00018	0.013	15.9	4.7	1	23	885	907	885	908	0.96

Sequence Information

Coding Sequence: atgcaAACCAATACAGATTTATTTACTCCACTCCCAGTGGATATATCTACACCAAATGCACTCCTGTACCAACTTAATGATTCCGCCGAAAAGTTCTTGAAGTCCAATGAgttctatgcattcgagatgGATAGTTTCACTGTACCGGAGATAGATTACATACCAACGGTTATATCCAGCTTAAGTCCAATTCCTGAGGAGGAGAATTGTCCATTAAACGTACCACCACTCGAAACACTATTCCCTCCAGTTGATCTGGCTGAAACTACACAGAAATTCCCAAAGGCAAATCTGGTTCCAGTGAAACAGTTACCGTGCGACTTGTGTTCGGAGACGTTCCCATCGGCACAAGTATTGCGTTTGCACAGGCGAGTCCAGCACATTTCAACTAAGGAATTCCGATGTCGTAAATGTCCAGCGTCGTTTAACTTTGAATCTAATTTATTTCTTCACTTGGCATCACATGTGTCTAGTTGTAGTACTAACAATGAGTGCCCAGAGTGTAAGATGGTATTTAAACGTATTTCGGCGTTTAAGGGTCATCTTAAGTTACATCAGACAAGTGACCAATTCCAGTGCAACCGGTGTGACAAAGAGTTCGACTTGAAAGGTTACTACGAGAAGCATTTGGCTAGGGCACACAAGCCGGGAGCGGACGGCACAGTTGAAGAAATCCTCGCGAAAGTTGCCACCAATGGAAGAAGCAgaccaaaaactaaaaaattacAAGGGAAATACGTGTGCCAAACATGTGGGAAACATTTTCCCAAGCCATGCTTGCTGAAGCGTCATGAAGTTTGCCATAGCGGGGCGAAACCATTCCAATGCACAAAATGTGACCAAGGATTTACACAAAAGACATCTTTAGCGAGGCATATGTTGCTGCATCAGGGGGTTAAGGATTTCAAATGCCCTAAGTGCAACTGCAGCTTTGCTCAGAAAAATAACCTTATTATGCATATTAAGCGCACCCATCCTACGCAGCCGAATTTAGACGAGATGTTTGCGTGCGAGCACTGTCCTTGTGTGTTCACCAAATTAAACAGTGTCAACCGTCATATGGCTATGATGCATCCGAAAAGTGAAAACTCGGCTGACAACGATGGGtttaacgatgacgatgatgatagtGTGAATGTTGCTAAGGTAATGGAGCAGTTGAAGAGCTTTCAGGAGTATATGGGCATTATGGATATGCAGCCACCAGCTTTGGAGCTTTCACTAATGAAACCGCCATCGCCTGGACCTAAAGTACATACAGTAACACTGGTTGATACTTTAAATCCGAAAAAGGAGAAGACTTACAAAGTGGTAAAGGAAATTCTCTATAAGGGACAGCGAACGATGGCGTGCATGTATTGTGATAAGCCTTTTAAAAGGCAATTCGACTTACTAAGACACCACCGAACGCACACCAAGGAGAAGCCGTTCGAGTGTGAAGTTTGCAAAAAGAATTTTGCAACAAGTGCAGCAGTTAAAGTTCATATGAATATCCATCTTTCGTCCCAAGAACAGCCCGTGAAAGTCTACGCTTGCACAGCGCCCGAATGTGGAAAGCGATTCTCTTCTATGCGAAAATTAGACATTCACACAAGGACTCATACAAGTTCCATATCATACATTTGTCCCCTATGTTCGAAAACATTCACATCCAAGACCGGTTTCTCTGCTCACAAACATCAAGAGGAAGATAAAGAATTTGATACTGTTCGTCCACTTCTAATGTCTCCTATTAAAGTCGAATCTAATGCCGCCGAAGAAGAACATAAGGCTGAAGAGTACGCCAAAAGAAACCATCAGTGTTGCGTCTGCGGCCTAAAAATGCAAAAGTTGTCGCATTTGAGACAGCACGAAGCTACTCACAAGGGAGAGAAACCTTACAAGTGTGCCATTTGCTTTAGaTCGTTCACTACACAAAGCTCCCTCAACTTGCATTACAAGATCCACTCTTCCGAGAAGCCTCACGTTTGTAACGTCTGCAACGCAAAATTCATAACGCAATCTCTTCTCAAGCGACACATGATATCGCACAATAATGAACGTAAATTCGCCTGCCCTTACTGTAGTGAACGCTTCAAAACCAGCGACAACTGCAAGAACCATATTCTAACGCATGCCCGCAGTCTACTAGCAATGCCCGACCCTCAATCAGCAGAGGAACTTTTACAAACACCCGATGTTGAAGAACTTCAGTCAGAAACTATATCTCTGCCTTGTATGGCAGTGGTTCAAAGCCCTCAGAAGAACCTATCACCGAAGTTTATTCAACTGGAAATGGTTAAGAACTGTAAAAAGCACAATCATAAGAATTTTACCATACAAACGGTAGCCAATTCCCCGAAGAAGTCATCAAAAAAATCTTTAGCTCGATCTTTTAAACAAATAAGCCAAACTGGTCGCCAGTGCGGTGAATGTGGGAAAACTTTTTACAAAGCTAGTGACTTGGAACGCCATGCACGGACACATACAAAAGAGAAGCCATTTGATTGTAACTCATGTCCGAAACGATTCGCTTTAAGATCTACTCTGGTGCAGCATATGAAGACGCATGATACGCTTAGGGAGACCTACGATTGTCAAGTGTGTGGCAAGAAGTATACGTCGAAAAAAGTTCTAATTGTGCATTTAAGGATTCATACCGGTGAGCGACCATTTCAGTGTGCTGTGTGTAAGAAAACCTTTAGAACTTCGGGACATAAAATATCTCATATGAAGGCACATCATAAAAAGAGAAAGTGA
Protein Sequence: MQTNTDLFTPLPVDISTPNALLYQLNDSAEKFLKSNEFYAFEMDSFTVPEIDYIPTVISSLSPIPEEENCPLNVPPLETLFPPVDLAETTQKFPKANLVPVKQLPCDLCSETFPSAQVLRLHRRVQHISTKEFRCRKCPASFNFESNLFLHLASHVSSCSTNNECPECKMVFKRISAFKGHLKLHQTSDQFQCNRCDKEFDLKGYYEKHLARAHKPGADGTVEEILAKVATNGRSRPKTKKLQGKYVCQTCGKHFPKPCLLKRHEVCHSGAKPFQCTKCDQGFTQKTSLARHMLLHQGVKDFKCPKCNCSFAQKNNLIMHIKRTHPTQPNLDEMFACEHCPCVFTKLNSVNRHMAMMHPKSENSADNDGFNDDDDDSVNVAKVMEQLKSFQEYMGIMDMQPPALELSLMKPPSPGPKVHTVTLVDTLNPKKEKTYKVVKEILYKGQRTMACMYCDKPFKRQFDLLRHHRTHTKEKPFECEVCKKNFATSAAVKVHMNIHLSSQEQPVKVYACTAPECGKRFSSMRKLDIHTRTHTSSISYICPLCSKTFTSKTGFSAHKHQEEDKEFDTVRPLLMSPIKVESNAAEEEHKAEEYAKRNHQCCVCGLKMQKLSHLRQHEATHKGEKPYKCAICFRSFTTQSSLNLHYKIHSSEKPHVCNVCNAKFITQSLLKRHMISHNNERKFACPYCSERFKTSDNCKNHILTHARSLLAMPDPQSAEELLQTPDVEELQSETISLPCMAVVQSPQKNLSPKFIQLEMVKNCKKHNHKNFTIQTVANSPKKSSKKSLARSFKQISQTGRQCGECGKTFYKASDLERHARTHTKEKPFDCNSCPKRFALRSTLVQHMKTHDTLRETYDCQVCGKKYTSKKVLIVHLRIHTGERPFQCAVCKKTFRTSGHKISHMKAHHKKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00389797;
90% Identity: iTF_01542373;
80% Identity: -