Basic Information

Insect: Xylota sylvarum
Gene Symbol: bab2
Assembly: GCA_905220385.1
Location: LR999959.1:86256432-86285812[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.2e-17 2e-13 50.4 0.0 2 43 479 521 478 523 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.2e-17	2e-13	50.4	0.0	2	43	479	521	478	523	0.95

Sequence Information

Coding Sequence: ATGGATGTAATAAAAGATTTGGCACCATTCAGCAGTGAACCCCTACCATTCCTGAAGAGTTTATCGCCAGCCTCAACAGGTGACATTCCACCATCGCCACGTCTCGATGACGACCGCATCGAAGTACCGATGCCAAAATCACAGTCGTTGCCAGCTTCGCCACAGCATCACTCGAGTGTGCCCAGCATTCCCCCGTTTTTCAAGGAAAAGGAAGCAATAAATTTCTCAGCCAAGAATTTAGAACCTGTAGTAACCAAAAATAGTCCCCCTATCGAGTTGACAAAACCACGAACACCAACCCCAAACCCAACCCCCATTCCCACGCCTTTGTCGCAGAAGTCGTCTGCTGGAAATCAGTCACATCAACAATTCTGCTTACGATGGAATAATTACCAAACCAATTTGACAAACGTCTTCGACGAACTCCTACAGAATGAGTCGTTCGTGGACGTGACACTTGCCTGCGAAGGGCAGTCCATTAAAGCGCACAAAATGGTGCTATCTGCATGCAGCCCATATTTCCAAGCACTTTTTTACGACAATCCATGTCAACATCCGATTATCATTATGCGTGATGTCCGGTGGAATGAACTGAAGGCAATCATGGAGTTTATGTACAAAGGTGAAATCAATGTGAGTCAGGATCAGATTAATCCGCTGCTAAAAGTCGCCGAAATGCTGAAGATACGCGGTTTAGCCGAGGTGAACACTACTGAAACGGCGGATGACATAAGCGCCCTAGCCAGCGCAACATTGGTCAGCGAGGAGGGAACTCCACGCAGGTCACCATCATCGCCGAAAAAACCACGTCTTCACGTAAACACCGAAAAGCTGCTGGAGGTGAATTTGTCTTCGGCTGGAGGACGCAAGCGCAGTAGATCTCCATCGCCTGCCGCCGTCACAGAACACCAAAAGGAGAAACAGAAGCAACTGCAGCACGAACAGCATCAACAACAACTTCAATACCAGCAaaggcaacagcaacagcaattgCCACAGGAATGTCCTTCGCCGTCAATGTCTTCTTCTGTGCGAAATCCTTTCGCATCACCCATACCACATTTGTCATCGTCAACTTCAAATAATCATTCATCATCTGCAGGTGGGGGTGGTAGTGGCAGTGGCAGCGCCGGCAGTGGCTATCCGATCGCGACACCACCTACAGGCGATGCATTAAGTTTGTCAGCTTTGGGCATTAATCATGTGGATGAGATGGAAATCAAGCCTGAGATTGCCGAGATGATTCGTGAGGAGGAAAGGGCTAAACTCATTGAAGGAGCACATCCATGGATGAGCGGAGCATCATCCTCATCAGTTGCTGATAGCTATCAATACCAATTGCAGTCGATGTGGCAGAAATGCTGGAATACTAATCAACAAAGTTTGGTTCAACAGTTGCGCTTTCGCGAACGTGGACCACTCAAGTCCTGGCGACCAGAATCAATGGCCGAGGCAATATTCAGTGTTTTAAAAGAAGGACTGTCCCTTTCACAGGCTGCACGTAAATTCGATATCCCATACCCGACCTTTGTTCTGTATGCCAATCGAGTTCATAATATGTTGGGACCTTCGTTAGATGGTGGTTCTGATCCTCGACCCAAGGCTAGAGGTCGTCCACAGAGAATTCTCTTGGGAATGTGGCCAGAAGAATTGATTCGTTCCGTCATAAAGGCAGTGGTATTCCGGGATTATCGTGAAATCAAAGAGGAAACTGTGCAAATGTACGCGAATGGAGGTGGAGGTGGAGCAGCCGCTGTTCCTCATACGGTAAACTTGTGTATTAACAACATCCTTAAATTCTCATTTATACAGTCTCAATATGGAATGCCAGGAGCTTCATCAAATGGCTCTTCATCCAACGGTTATCACAATAAAATCGGGCTTCCCAGCGGAACCTTGCAAGCAGATTCCACCAGTCCCCTTTCAACTATGGCGGAAACCCTTCGTCGTCAGATCCAAATGTCACAACAATCTCCGTCACCATCGTTAAATATGTACAAGTCGCCGGCCTTCCTGCAGCGATCTGAAATGGAAGACCCAATGTCGAAAAGGGGTTCCGCCGATCTCCATCTATCCTCGGGAAAAATGGCAGACAATTTGCCGGATCTAAGTGCACTTGGTCTCATGGGAATCCCCGGTCTCAATGTTATCCCCCAAGGCCGTAGCCAGCATCCTATTTcccatcaacaacagcaaccacAACATCTCCAGCCAAACCCTTCTTTCTCAAGTCGAGATCTGAAAGACAGCATGCATCAGCACATGTCCAATGCAATGTCACAGGCTGCCGCCGCCGCAGCGTCAAGACCCCAACTTCCATACGGACAACAGCGAAGTGGCAGCCAGAGCAGCAGTAGTAGTTCCCATGCAAAGCCCACCAGCAGCTCTCCCTTCTCCATAAACTACAAGACAAAAGCCGAACCCTTACCCTACAAATTCCCAGACAAGCGAATGCTCGAAGGCCTAACGCCCGGCATCGACTTCGAGGCAATCGCAAACGGTCTCCTTCAGAAATCGCACAAAGCCTCGCCCCGCTTCGAAGACTTCTTCCCCGGTCCAGATGTAAACGATTTGTTTGCGGCGAATTCGGCCTCCGAGGCGTCCTCAGCCGGCTACCCCATGAAGGATCATCCCATAGCGAAAATCAAGCTGGAGCACCAGCACCACAGCACAGATACCCATGAGGAATAA
Protein Sequence: MDVIKDLAPFSSEPLPFLKSLSPASTGDIPPSPRLDDDRIEVPMPKSQSLPASPQHHSSVPSIPPFFKEKEAINFSAKNLEPVVTKNSPPIELTKPRTPTPNPTPIPTPLSQKSSAGNQSHQQFCLRWNNYQTNLTNVFDELLQNESFVDVTLACEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVRWNELKAIMEFMYKGEINVSQDQINPLLKVAEMLKIRGLAEVNTTETADDISALASATLVSEEGTPRRSPSSPKKPRLHVNTEKLLEVNLSSAGGRKRSRSPSPAAVTEHQKEKQKQLQHEQHQQQLQYQQRQQQQQLPQECPSPSMSSSVRNPFASPIPHLSSSTSNNHSSSAGGGGSGSGSAGSGYPIATPPTGDALSLSALGINHVDEMEIKPEIAEMIREEERAKLIEGAHPWMSGASSSSVADSYQYQLQSMWQKCWNTNQQSLVQQLRFRERGPLKSWRPESMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEETVQMYANGGGGGAAAVPHTVNLCINNILKFSFIQSQYGMPGASSNGSSSNGYHNKIGLPSGTLQADSTSPLSTMAETLRRQIQMSQQSPSPSLNMYKSPAFLQRSEMEDPMSKRGSADLHLSSGKMADNLPDLSALGLMGIPGLNVIPQGRSQHPISHQQQQPQHLQPNPSFSSRDLKDSMHQHMSNAMSQAAAAAASRPQLPYGQQRSGSQSSSSSSHAKPTSSSPFSINYKTKAEPLPYKFPDKRMLEGLTPGIDFEAIANGLLQKSHKASPRFEDFFPGPDVNDLFAANSASEASSAGYPMKDHPIAKIKLEHQHHSTDTHEE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00310951;
90% Identity: iTF_01541365;
80% Identity: iTF_01542297;