Cgro010977.1
Basic Information
- Insect
- Cheilosia grossa
- Gene Symbol
- bab2
- Assembly
- GCA_963082955.1
- Location
- OY720146.1:817706-844201[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-16 1.7e-13 50.4 0.0 2 43 499 541 498 543 0.95
Sequence Information
- Coding Sequence
- ATGGATGTAATAAAAGATTTACCATCGTTCGGTGAGCCCTTGCCATTCCTTAAGAGTCTCTCGCCAGCCTCAACAGGTGACATTCCACCATCACCCCGTCTAGACGACGAACGCATCGAAGTGCCGATGCCAAAGTCACAGTCGTTGCCAGCCTCTCCGCAGCACCACTTGAGTGTGCCCAACATTCCACCGTTTTTCAAGGACAAGGAAGCGATAAATTTCTCAGCCAAGATCCTGGAGGCCACAGTTACCAAAAATAAACCGCCCGTCGAGGTGACCAAACCACCGACACCGTCTCCCAGCCAGAAGTCGTCGTCCGGTGGCCAATCGCATCAGCAATTCTGCTTGCGGTGGAATAATtaccaaaccaatttgacaaaCGTCTTTGACGAACTGCTGCAGAGTGAGTCCTTTGTCGATGTAACGCTGGCGTGCGAGGGACAATCGATTAAGGCGCACAAAATGGTTCTATCCGCCTGCAGTCCGTATTTCCAAGCCCTCTTCTACGACAATCCGTGTCAACATCCAATAATCATTATGCGTGACGTCCGGTGGAACGAGCTGAAAGCAATAATGGAGTTTATGTACAAAGGCGAAATCAATGTGAGTCAGGATCAGATAAATCCGCTGCTAAAGGTCGCCGAAATGCTAAAAATACGCGGTCTAGCCGAGGTGAACACCACTGAAACGGCGGATGACATCAGTGCCCTGGCCAGCGCAACATTGGTCAGCGAGGAGCCGACTCCACGCAGGTCACCACCGTCGCCGAAAAAACCACGTCTTCACGTAAACACCGAAAAGCTGTTGGAGGTGAATTTGTCTTTAGCTGGAGGACGCAAGCGCAGTAGGTCTCCATCTCCTGCCGCTACAGACCACCAAAAAGAGAAACTCAAACAAATGCAGCAcgaacaacagcaacaccagcaccaacaacagcagcagcagcagcagcagcagcatcaacagcaacaacaacaacaccaacaacaacaacaacaacatcaataCCAAcaacggcagcagcagcagcagcaacaacaacagcaacagccacCACAGGAATGTCCTTCGCCGGCGATGTCTTCATCTGTGCGAAATCCTTTTGCGTCGCCCATACCGCATTTGTCATCGTCAAGTGGAAACAACCATTCATCGTCgggtggaggtggtggtgggCCTGGTAGTGGTAGTGCTGGTGGCTATCCGATCGCTACACCACCTGCAGGTGATTCAATGAGCCTATCAGCTTTGGGCATCAATCATGTGGACGAGATGGAGATCAAGCCTGAGATAGCTGAGATGATCCGCGAGGAGGAGAGGGCTAAACTGATCGAAGGAGCACATCCATGGATGAGCGGGGCAGCGTCCTCTTCTGTAGCTGACAGCTACCAATACCAACTGCAGTCAATGTGGCAGAAATGCTGGAATACCAACCAGCAAAGTCTAGTGCAGCAGCTGCGCTTTCGCGAACGAGGGCCCCTCAAGTCTTGGCGCCCAGAATCAATGGCCGAAGCCATATTTAGCGTGTTAAAAGAGGGTTTGTCCCTGTCACAGGCGGCACGGAAGTTCGATATCCCCTACCCGACCTTCGTTCTGTATGCTAATCGGGTTCACAATATGTTGGGGCCCTCGTTAGACGGTGGGTCCGATCCCCGACCCAAGGCCAGAGGCCGTCCCCAGAGGATTCTCCTGGGAATGTGGCCGGAAGAGTTGATTCGTTCGGTCATAAAGGCAGTGGTATTTCGGGACTATCGTGAAATAAAAGAGGAAACTGTCCAAATGTACGCAAACGGCGGTGGAGGCGGTGCAGCTGCAGTTGCTCATTCGTCGCAGTATGGTATGCCGGGAACACCATCGAACGGCTCTTCATCTAACGGTTACCACAATAAAATCGGACATCCCAGTGGAACCCTGCCGGCAGATTCCGCCAGCCCCTTGTCAACTATGGCCGAGACTCTGCGCCGTCAAATCCAAATGTCACAACAGTCCCCGTCGCCATCGTTGAACATGTACAAGTCGCCAGCCTTCCTGCAGCGCTCTGAAATGGAAGACCCGATTGCGAAAAGAAGTTCTGCCGACCTCCATCTGTCTGCGGGAAAGATGCCGGACAATTTGCCCGACCTGAGCGCACTGGGCATCATGGGAATTCCCGGTCTTAATGTCATTCCGCAAGGTCGCAGCCAGCACCCAATttcacaacagcaacagcatctCCAGCCAAACTCTTCGTTCTCGAGTCGCGACCTGAAGGAAAGCATGCAACAACACATGTCGAATGCAATGTCACAGGCGGCCGCAGCCGCTGCATCCAGACCTCAGCTTCCATATGCACAGCAACGAAGTGGCAGTCAGAGCAGTAGCGGTAGCAGTTCCCACCAAAAGCCCAACAGCAGCTCTCCGTTCTCCATGAACTACAAGACAAAAGCCGAGCCGTCATCGTATAAATTCCCCGACAAGCGAATGCTCGAGGGTCTGACCCCCGGCATCGACTTCGAGGCGATCGCCAACGGTCTTCTGCAGAAATCGCACAAAGCATCGCCCCGCTTCGAAGACTTCTTCCCCGGCCCCGACGTCAGCGAACTATTTGCGGCGAACTCGGCCTCCGAAGCAGCAGCTGGCTACCCCATGAAAGATCACCCCATCGCGAAGATCAAGTTGGAACATCAGCACCACAGCACAGACACCCACGAGGAATAG
- Protein Sequence
- MDVIKDLPSFGEPLPFLKSLSPASTGDIPPSPRLDDERIEVPMPKSQSLPASPQHHLSVPNIPPFFKDKEAINFSAKILEATVTKNKPPVEVTKPPTPSPSQKSSSGGQSHQQFCLRWNNYQTNLTNVFDELLQSESFVDVTLACEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVRWNELKAIMEFMYKGEINVSQDQINPLLKVAEMLKIRGLAEVNTTETADDISALASATLVSEEPTPRRSPPSPKKPRLHVNTEKLLEVNLSLAGGRKRSRSPSPAATDHQKEKLKQMQHEQQQHQHQQQQQQQQQQHQQQQQQHQQQQQQHQYQQRQQQQQQQQQQQPPQECPSPAMSSSVRNPFASPIPHLSSSSGNNHSSSGGGGGGPGSGSAGGYPIATPPAGDSMSLSALGINHVDEMEIKPEIAEMIREEERAKLIEGAHPWMSGAASSSVADSYQYQLQSMWQKCWNTNQQSLVQQLRFRERGPLKSWRPESMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEETVQMYANGGGGGAAAVAHSSQYGMPGTPSNGSSSNGYHNKIGHPSGTLPADSASPLSTMAETLRRQIQMSQQSPSPSLNMYKSPAFLQRSEMEDPIAKRSSADLHLSAGKMPDNLPDLSALGIMGIPGLNVIPQGRSQHPISQQQQHLQPNSSFSSRDLKESMQQHMSNAMSQAAAAAASRPQLPYAQQRSGSQSSSGSSSHQKPNSSSPFSMNYKTKAEPSSYKFPDKRMLEGLTPGIDFEAIANGLLQKSHKASPRFEDFFPGPDVSELFAANSASEAAAGYPMKDHPIAKIKLEHQHHSTDTHEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311137; iTF_00671655; iTF_00671526; iTF_01521803; iTF_01521961; iTF_01116369; iTF_01116526; iTF_00724693; iTF_00724872; iTF_01541365; iTF_01541519; iTF_01300983; iTF_01300769; iTF_01542297; iTF_01542134; iTF_00672285; iTF_00672152; iTF_00310174; iTF_00310345; iTF_00670878; iTF_00671020;
- 90% Identity
- iTF_00724693;
- 80% Identity
- iTF_00311137;