Xseg013182.1
Basic Information
- Insect
- Xylota segnis
- Gene Symbol
- bab2
- Assembly
- GCA_963583995.1
- Location
- OY757238.1:68405540-68431517[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-17 1.3e-13 50.4 0.0 2 43 481 523 480 525 0.95
Sequence Information
- Coding Sequence
- ATGGATGTAATCAAAGATTTGGCACCATTCAGCAGTGAGCCCCTGCCATTCCTGAAGAGTTTATCGCCAGCGTCAACAGGTGACATTCCACCATCGCCACGTCTGGACGACGACCGCATCGAAGTGCCGATGCCAAAATCACAGTCGTTGCCAGCTTCGCCGCAGCACCACTCGAGTGTGCCCAGCATTCCGCCGTTTTTCAAGGAAAAGGAGGCAATAAATTTCTCCGCCAAGAGCTTAGAGCCTGCAGTAACCAAAAATAACCCCCCCATCGAGTTGACAAAACCACGAACACCGACACCAACACCGACGCCAACTCCCATTCCCACACCTGTGTCGCAGAAGTCGTCTGCCGGAAATCAGTCGCATCAACAATTCTGCCTACGATGGAATAATTACCAAACCAATTTGACAAACGTCTTCGACGAACTCCTCCAGAATGAGTCGTTCGTGGATGTGACACTCGCCTGCGAGGGGCAGTCCATCAAGGCGCACAAAATGGTCCTATCCGCTTGCAGCCCATATTTCCAGGCACTTTTCTACGACAATCCATGTCAACATCCGATTATCATAATGCGTGACGTCCGGTGGAACGAACTGAAGGCAATCATGGAGTTTATGTACAAAGGTGAAATCAATGTGAGTCAGGATCAGATAAATCCGCTGCTAAAAGTCGCCGAAATGCTAAAGATACGCGGTCTGGCCGAGGTAAACACCACTGAAACAGCGGATGACATAAGCGCCCTAGCCAGCGCAACATTGGTCAGCGATGAGGGAATTCCACGCAGGTCACCACCATCGCCGAAAAAACCACGTCTTCACGTAAACACCGAAAAGCTGCTGGAGGTGAATTTGTCTTCGGCTGGAGGACGCAAGCGCAGTAGATCTCCATCGCCTGCTGCCGCCACTGAACACCAAAAGGAGAAACAGAAGCAACTGCAGCAcgaacagcatcaacaacagcttcAATACCAGCAACGGCAACAGCAGCTGCCACAGGAATGTCCTTCGCCGTCAATGTCTTCTTCTGTGCGAAATCCTTTCGCATCGCCCATACCACATTTGTCATCGTCAACTTCAAATAATCATTCATCATCTACTGGTGCGGGTGGCACTGGCAGTGGCGGTGCTAGTGGTGGCAGTGGCTATccgatcgcgacaccacctacAGGCGATGCATTAAGTTTGTCAGCTTTGGGCATTAATCATGTTGACGAGATGGAAATCAAGCCTGAGATTGCCGAAATGATCCGCGAAGAGGAGAGGGCTAAACTAATTGAAGGAGCGCATCCATGGATGAGCGGAGCTGCATCCTCATCTGTTGCTGATAGCTACCAATACCAACTGCAGTCGATGTGGCAGAAATGCTGGAACACTAATCAACAAAGTTTGGTTCAACAGCTACGCTTTCGCGAACGTGGACCACTCAAGTCCTGGCGACCAGAATCTATGGCCGAGGCTATTTTCAGTGTTTTAAAGGAAGGACTGTCCCTTTCACAGGCTGCTCGTAAATTCGATATCCCGTACCCGACCTTTGTTCTGTATGCCAATCGCGTTCATAACATGTTGGGACCTTCGCTAGATGGTGGTTCTGATCCTCGACCCAAGGCCAGAGGTCGTCCACAGAGAATCCTCTTAGGAATGTGGCCAGAAGAGTTGATTCGCTCTGTCATAAAGGCAGTGGTATTCCGCGACTATCGTGAAATCAAAGAGGAAACGGTGCAAATGTACGCAAATGGAGGTGGAGGTGGCGCAGCCGCTGTTCCTCATACGTCTCAATACGGAATGCCGGGAGCTCCATCAAATGGCTCTTCATCCAATGGGTATCACAATAAAATTGGGCTTCCCAGCGGAAACCTGCAGGCAGATTCCACCAGCCCTCTGTCAACTATGGCGGAAACTCTCCGTCGTCAGATCCAAATGTCGCAACAATCTCCGTCACCATCGTTGAACATGTACAAGTCGCCGGCCTTCTTGCAGCGATCTGAAATGGAAGACCCAATGTCGAAAAGAGGCTCCGCTGATCTCCATCTATCTTCCGGCAAAATGGCAGACAATTTGCCGGATCTAAGCGCCCTTGGTTTGATGGGAATTCCCGGTCTCAATGTTATCCCACAAGGTCGCAGCCAACATCCGATTccccatcaacaacaacaaccgccGCATCTCCAGCCAAACACTTCATTCTCAAGTCGAGATCTAAAGGACACCATGCATCAGCACATGTCCAACGCAATGTCACAAGCAGCCGCCGCCGCAGCGTCAAGACCCCAAATTCCATACGGACAGCAGCGAAGTGGCAACCAGACCGGCAGTAGTAGTTCCCATCCCAAGCCCACCAGCAGCTCTCCCTTCTCCATAAACTACAAGACAAAAGCCGAACCCTCACCCTACAAATTCCCCGACAAGCGGATGCTTGAAGGCCTAACGCCCGGCATCGACTTCGAGGCCATCGCCAACGGACTCCTCCAGAAATCGCACAAAGCCTCGCCCCGCTTCGAAGACTTCTTCCCCAGCCCAGATGTAAACGACTTGTTTGCGGCGAATTCGGCCTCCGAACCGTCCTCCGCCGGCTACCCCATGAAGGATCATCCCATAGCGAAGATCAAGCTGGAGCACCAGCACCACAGCACAGACACCCATGAGGAATAA
- Protein Sequence
- MDVIKDLAPFSSEPLPFLKSLSPASTGDIPPSPRLDDDRIEVPMPKSQSLPASPQHHSSVPSIPPFFKEKEAINFSAKSLEPAVTKNNPPIELTKPRTPTPTPTPTPIPTPVSQKSSAGNQSHQQFCLRWNNYQTNLTNVFDELLQNESFVDVTLACEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVRWNELKAIMEFMYKGEINVSQDQINPLLKVAEMLKIRGLAEVNTTETADDISALASATLVSDEGIPRRSPPSPKKPRLHVNTEKLLEVNLSSAGGRKRSRSPSPAAATEHQKEKQKQLQHEQHQQQLQYQQRQQQLPQECPSPSMSSSVRNPFASPIPHLSSSTSNNHSSSTGAGGTGSGGASGGSGYPIATPPTGDALSLSALGINHVDEMEIKPEIAEMIREEERAKLIEGAHPWMSGAASSSVADSYQYQLQSMWQKCWNTNQQSLVQQLRFRERGPLKSWRPESMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEETVQMYANGGGGGAAAVPHTSQYGMPGAPSNGSSSNGYHNKIGLPSGNLQADSTSPLSTMAETLRRQIQMSQQSPSPSLNMYKSPAFLQRSEMEDPMSKRGSADLHLSSGKMADNLPDLSALGLMGIPGLNVIPQGRSQHPIPHQQQQPPHLQPNTSFSSRDLKDTMHQHMSNAMSQAAAAAASRPQIPYGQQRSGNQTGSSSSHPKPTSSSPFSINYKTKAEPSPYKFPDKRMLEGLTPGIDFEAIANGLLQKSHKASPRFEDFFPSPDVNDLFAANSASEPSSAGYPMKDHPIAKIKLEHQHHSTDTHEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00310951;
- 90% Identity
- iTF_01541519; iTF_01542297; iTF_01542134; iTF_00310174; iTF_00310345;
- 80% Identity
- iTF_01541519;