Basic Information

Insect: Xylota segnis
Gene Symbol: -
Assembly: GCA_963583995.1
Location: OY757239.1:33795417-33806654[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.3e-05 0.0032 17.8 2.1 1 23 473 495 473 495 0.96

2 18 1.1e-05 0.00084 19.7 0.4 1 23 501 523 501 523 0.97

3 18 2.1e-05 0.0016 18.8 0.5 1 23 529 551 529 551 0.98

4 18 1.8e-05 0.0014 19.0 3.1 1 23 557 579 557 579 0.97

5 18 4.1e-05 0.0031 17.9 4.7 1 23 585 607 585 607 0.99

6 18 7.5e-05 0.0057 17.0 5.7 1 23 613 635 613 635 0.97

7 18 2.1e-07 1.6e-05 25.1 4.3 1 23 641 663 641 663 0.98

8 18 1.3e-07 1e-05 25.7 2.4 1 23 669 691 669 691 0.97

9 18 0.00018 0.013 15.9 5.7 1 23 697 719 697 719 0.97

10 18 2.2e-05 0.0017 18.7 6.5 1 23 725 747 725 747 0.98

11 18 3.7e-06 0.00028 21.2 4.5 1 23 753 775 753 775 0.98

12 18 8.7e-06 0.00066 20.0 8.1 1 23 781 803 781 803 0.98

13 18 2.1e-06 0.00016 21.9 7.9 1 23 809 831 809 831 0.98

14 18 7.9e-07 6e-05 23.3 7.7 1 23 837 859 837 859 0.98

15 18 0.00025 0.019 15.4 9.5 1 23 865 888 865 888 0.95

16 18 0.00021 0.016 15.7 0.5 1 23 894 916 894 916 0.97

17 18 0.00093 0.071 13.6 4.4 1 23 926 948 926 948 0.98

18 18 7.7e-06 0.00059 20.2 1.7 1 23 954 977 954 977 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.3e-05	0.0032	17.8	2.1	1	23	473	495	473	495	0.96
2	18	1.1e-05	0.00084	19.7	0.4	1	23	501	523	501	523	0.97
3	18	2.1e-05	0.0016	18.8	0.5	1	23	529	551	529	551	0.98
4	18	1.8e-05	0.0014	19.0	3.1	1	23	557	579	557	579	0.97
5	18	4.1e-05	0.0031	17.9	4.7	1	23	585	607	585	607	0.99
6	18	7.5e-05	0.0057	17.0	5.7	1	23	613	635	613	635	0.97
7	18	2.1e-07	1.6e-05	25.1	4.3	1	23	641	663	641	663	0.98
8	18	1.3e-07	1e-05	25.7	2.4	1	23	669	691	669	691	0.97
9	18	0.00018	0.013	15.9	5.7	1	23	697	719	697	719	0.97
10	18	2.2e-05	0.0017	18.7	6.5	1	23	725	747	725	747	0.98
11	18	3.7e-06	0.00028	21.2	4.5	1	23	753	775	753	775	0.98
12	18	8.7e-06	0.00066	20.0	8.1	1	23	781	803	781	803	0.98
13	18	2.1e-06	0.00016	21.9	7.9	1	23	809	831	809	831	0.98
14	18	7.9e-07	6e-05	23.3	7.7	1	23	837	859	837	859	0.98
15	18	0.00025	0.019	15.4	9.5	1	23	865	888	865	888	0.95
16	18	0.00021	0.016	15.7	0.5	1	23	894	916	894	916	0.97
17	18	0.00093	0.071	13.6	4.4	1	23	926	948	926	948	0.98
18	18	7.7e-06	0.00059	20.2	1.7	1	23	954	977	954	977	0.96

Sequence Information

Coding Sequence: ATGAATTCGGATCACACAACAGCTCCTGGCGAGTCGTCATCAAATCCGAATGACTCTCAACAAAGTCGGCATTCGCCGCAGCAGgcccagcaacaacaacagcagcagcagcagcagcaccatcaacatcaacagcagcagcagcagcagcagcaacagcaacagcaacaactcgCTCACCAGCGACATCCGCAACAATTGAACGAACAACATgtccagcaacagcaacatcacGAAAATCCTGGTATTAGCGGAGTTATTCAGCCTGTTGGCGGGATCGATTCGGATGTATccaaacaacaacatcaacaccaTCAGCCTTCACTCCTATCGGGTTCCCAACATCTTGGAAAGTACTGGGTTGTTACGAATCTATTTCAGGGTCCAGGTCAGCCGCCATACAATATTGGTGTAACACCAGCAACCTCAGCAGTTCCTACACTACCGCCTCCAATATCATCTCATTCAAGCGCCTCAGCAACAAAATCAGGAAACTCtaagcaacaacagcaagatCAACTAGCACCTAACTCGCACACCCAATCACCAGCACATATAGTATCATCGGTGGGTGCAACATCATTACAAATACCCAATCCAATGATAACAAATGCATCGATGAATCAGCAACAGCTTCCGAATGGCACAATTATTGCAGCACCAAGGCATCCGGATTCCTTACACGTCCATGGAACGATGTCCTCCGACGATAATCGACACGTCTCACACGGTATGCAAGACATAAAGGAGGAGAAACCTTTCGCAAACGGCAAACAAAATAATCACATGGCTCATGTTAATCCAGCATCTTCCGTATCGTCGAAAATGAATTCTGGCAGTGGTGGCAACAATGCGCAATCTGCCGAACCAGGCGGTGGCAGTGGTGGTGGACAAATGGTTAACAAATTACAAGCGGGCGGCGGTGGTCCCAGTGGAGCTGTTGGTGTCGGTGGCGGAGGCAATGAACAACAAGAGATGGTAAGCGGTAAGCCGCCACACGGCGTTGAAATGTACAAAGTCAATATTGAAGATTTGAGTCAATTTCTATCATATCACGAGGTCTTTGGTAAGATCCATGGCGAAGTAATAAATCAACAGCAAATATCATCGCACACGGTAACGCATCCTACTACGAATGTATCAACCTCAAATGCTGGTGGCAATACCTCTGTGAGTGGTACTGTTACCGGTTCACTACCTCCACCCCCGCCACCGTCGACAAATGGTAACTCGATAGTGACAACCAACAGCCTTACTAGTTCCGGGACTGGTGCACAAGCAGCTCCTCCACCAGGTGGTGGTGGGCCCACTGCTCCCGGTGATCTAATACTGCCTAAAATGGAAAATCAAGGGATGGGTGTAGATCAGAATACCCCTCTATTGGCACCCGATGGAACGCCCATTATGGGTGGCACGCATATCTGTGACATTTGCGGCAAAATGTTCCAATTTCGCTATCAACTTATTGTTCATCGTCGCTATCATAGCGAACGTAAGCCATTTAATTGCCAAGTTTGCGGACAGGGATTCACAACGTCGCAAGATCTCACCCGTCACGGTAAGATCCATATTGGTGGGCCAATGTTCACGTGTGTCATTTGCTTCAATGTGTTTGCCAACAACGCCAGCCTGGAACGGCATATGAAACGTCATTCTACCGACAAGCCATTCGCGTGCACCATATGCCAGAAGACATTTGCCCGCAAAGAGCACTTGGACAACCACTTTCGCAGTCATACGGGCGAGACGCCATTCCGTTGTCAGTATTGTGCGAAAACGTTTACCCGAAAGGAACACATGGTGAATCATGTGCGCAAGCATACCGGAGAGACGCCGCATCGTTGCGATATTTGTAAGAAATCTTTTACGCGGAAAGAACACTATGTAAACCATTACATGTGGCATACAGGTCAGACACCGCATCAGTGCGATATTTGTGGGAAGAAGTACACTCGGAAGGAACATCTAGCCAATCATATGCGATCCCATACAAATGATACGCCATTCCGGTGTGAGATATGTGGCAAGAGTTTTAGCCGAAAGGAACACTTTACCAATCACATCTTATGGCATACAGGAGAAACCCCTCATCGCTGTGATTTCTGTGCGAAGACGTTCACCAGGAAGGAGCACCTATTGAACCATGTCCGCCAACATACGGGTGAGTCACCACATCGCTGCACCTATTGCTTGAAGACCTTCACTCGTAAGGAACACCTAGTGAATCACATTCGTCAACACACAGGCGAGACCCCCTTCAAGTGCACCTACTGTACCAAGGCGTTTACACGAAAGGATCATATGGTAAATCACATCCGTCAACATACTGGAGAGTCACCGCATAAATGCACCTACTGCACGAAAACCTTCACAAGGAAAGAACATCTGACCAATCATGTGCGCCAACATACGGGTGAGTCGCCTCATCGTTGCACCTACtgcaaaaaaacatttacacgCAAGGAACACCTAACAAATCACATCCGGTTGCATACAGGCGATTCGCCCCACAAATGCGAATACTGCCAAAAGACGTTCACACGCAAGGAGCACTTAAACAACCATATGCGACAACACTCGAGTGACAACCCACACTGTTGTAATGTGTGCAACAAGCCGTTTACACGCAAGGAGCATTTGATCAATCATATGTCGCGCTGTCATACCGGTGATCGACCGTTTGCTTGCGAGACATGTGGCAAAAGTTTCCCGCTAAAAGGCAATTTACTCTTCCATCAACGTAGTCACACCAAGGGTCAAGAGTGTGAACGTCCGTTTTCGTGCGAGAAATGTCCCAAGAACTTCATTTGCAAAGGTCATCTGGTATCGCATATGCGTTCGCATTCAGGTGAGAAACCACATGCGTGCACTATGTGTAGTAAGGCATTTGTAGAGAGAGGGAATCTTAAGCGTCACATGAAAATGAATCATCCTGATGCAGTTATGCCACCGCCTCCGACACCGATTCCCGGTATATTGACGCAAATCAAACAGGAGATCAATCCAATAATAAttcCTCATCAACCTCCAACCATGCACACAATTCAGCAAATCACTTCAACTGCAGGCAGCTCAAGTGCAAATAATCCAGGGAATCCAGCTCTTCTGGCGCCCGGTCTTGTACCAATGGTAACATCTACAATAACTTCACATATTAGTCAAAAGCAGCAAtcccatcaacaacaacagcaacaacaacaacaacaccaacatcaacagcaattacaacagcaacaacaactctTACAGCTATCAATTCAACAAGCAGCTCAGCATCAGCAAGTTGAACAtagacaacagcaacaacagcaacagcagcagcaacaacatcagcagcagcaacaaagccatcaacagcaccaacaacagcagcagcaacaacagcagcaacaacaatcaCAACAGCAATCACAGCATCAACAGCCACAACCGCCATCAGTGCCGATAGCTCTAATTGGAGCAGATCCCTCAGCGATAGCACGTGCTGCTATGCAGCTACAACATTTGCCAACCAACGTCGAACAACATCCAGTGGTATACTAA
Protein Sequence: MNSDHTTAPGESSSNPNDSQQSRHSPQQAQQQQQQQQQQHHQHQQQQQQQQQQQQQQLAHQRHPQQLNEQHVQQQQHHENPGISGVIQPVGGIDSDVSKQQHQHHQPSLLSGSQHLGKYWVVTNLFQGPGQPPYNIGVTPATSAVPTLPPPISSHSSASATKSGNSKQQQQDQLAPNSHTQSPAHIVSSVGATSLQIPNPMITNASMNQQQLPNGTIIAAPRHPDSLHVHGTMSSDDNRHVSHGMQDIKEEKPFANGKQNNHMAHVNPASSVSSKMNSGSGGNNAQSAEPGGGSGGGQMVNKLQAGGGGPSGAVGVGGGGNEQQEMVSGKPPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISSHTVTHPTTNVSTSNAGGNTSVSGTVTGSLPPPPPPSTNGNSIVTTNSLTSSGTGAQAAPPPGGGGPTAPGDLILPKMENQGMGVDQNTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCVICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPIPGILTQIKQEINPIIIPHQPPTMHTIQQITSTAGSSSANNPGNPALLAPGLVPMVTSTITSHISQKQQSHQQQQQQQQQHQHQQQLQQQQQLLQLSIQQAAQHQQVEHRQQQQQQQQQQQHQQQQQSHQQHQQQQQQQQQQQQSQQQSQHQQPQPPSVPIALIGADPSAIARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426545;
90% Identity: iTF_00315368;
80% Identity: -