Xare002283.1
Basic Information
- Insect
- Xylocampa areola
- Gene Symbol
- retn
- Assembly
- GCA_935412865.1
- Location
- CAKXYQ010000068.1:222384-229112[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-20 2.5e-16 60.3 0.0 17 89 21 91 9 91 0.94 2 2 3.6 1.1e+04 -2.7 0.0 25 38 219 232 181 234 0.58
Sequence Information
- Coding Sequence
- ATGTCAGTGGACGGTCATCAATGTCAACTCTACAACTCTATTTCTTGCAGTGTTCCGATAGGCACTCCAATCAACCGGCTACCTATAATGGCGAAGTCGGTACTAGACCTATACGAGCTGTACAATTTGGTGATAGCCCGCGGAGGCCTGGTAGAGGTGATCAATAAGAAGCTATGGCAGGAGATCATCAAAGGGCTGCGGCTACCATCCTCCATCACGTCTGCAGCCTTCACGTTACGCACACAATACATGAAATACCTGTACGATTATGAGTGTGAGAAGAAGAACCTGTCCACCAGGAATGAGCTGGATGCAGCTATTGAAGGGAACAAGCGAGAGGGTCGCAGGGCCTCCGGGCAGTACGACGCACAGGCCGCATTAGCTATGCCCCCTCTAAATCGCGTTCCCGCGTCTCTCGCGCAGCTGTCCCAGCACATGCAGCCGCTGTCGCTGTCCCTGGGGGGCGTGGCGCCGCGCTTGCCGCCACTGCCGCCGCACGCGCCGCATCTAGCGCAGCACGACATCGAGTACAGAGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAACTGATGAGGAATGGTTCCGAATCGCCTCCAAGCAATGGCCCAGCTCCCATAATGTCTCCTCGCGACGCAGCTGCCCTTAGTGCTATCGATGTCTCCCGCCTCACTCTCTGGTCACTCTACAATAATAACAACAACAATAGTCCACAACCAGACCTTGAGCCACAACGCGAGGCTCTAAACCTGAGCGAGAGCCCCAACTCGATGACGAGTGGAGGCAAGCGGGAGGCGTGTCGGTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGGCCTGCCTCTCCGCGCTCCGAGCCGCACTCGCCGCCTGCACACCGTCACGCGCGGCGAGAAGCTACATCACCACAGATCAATGGACTTCCCAATACTAATGGTGTTAATGGGGCTGCATTCAAGATTACTACTAGAGGTGACGCGAGCACGGGTGACCAACAGCTAGTGGTGTCAATAGAGTTGAACGGAGTGACGTACGAAGGTGTCCTCTTTCCCTCAGGCAACGGCCAGAACGGACACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MSVDGHQCQLYNSISCSVPIGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRNELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSMTSGGKREACRSPAPPAKRRTPRPASPRSEPHSPPAHRHARREATSPQINGLPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -