Xcam016132.1
Basic Information
- Insect
- Xiphydria camelus
- Gene Symbol
- bab2
- Assembly
- GCA_963678675.1
- Location
- OY783198.1:1028903-1044402[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.1e-12 1.8e-09 37.6 0.0 1 39 379 418 379 422 0.90 2 4 2.5e-11 5.6e-09 36.1 0.1 2 39 434 471 433 474 0.94 3 4 9.1e-18 2e-15 56.7 0.0 2 45 489 533 488 533 0.97 4 4 1e-17 2.3e-15 56.5 0.1 1 42 540 582 540 583 0.97
Sequence Information
- Coding Sequence
- ATGGAGACCGATCGCTTTTGGGGTATCCACTACAGCGGAGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAACATGACATCGGTTTTTCATCAGTTGCTGCAGACAGAGGCCTTCGTTGACGTCACGCTCGCCTGCAACGAGGCTTCGCTGAAGGCGCACAAGGTGGTATTATCGGCGTGCAGTTCCTACTTTCAAAAGCTCCTGCTGTCGAACCCCTGCAAGCACCCGACCATCATCATGCCGCAAGACGTGTGCTTCAACGACCTCAAGTTCATCATCGAGTTCGTCTACAGGGGAGAGATCGACGTGTCGCAAGCGGAGCTCCAGTCCTTGCTGAAGACGGCTGACCAGTTGAAGATCAAGGGCCTCTGCGAAGTACCGGAGAGCCGGGAGGGTCCTCCCTCTGTCAGCCTCAGCTCACCTCCCAGGGAACACGGTGGCTCGAGATTGAACTACGCCAAACTAAAGAGGCATCATCCCAGGTACAAAAGGCCCAGATTCGAACCACGCTCCGACTCGAGGCACTGCGAGAAGTACAAAAAGGAAGAGGCGGAAGGAGCGTACGGTCGCGACGACAAGGAGAATCACAGAGACTGGCAGACGGAGGATGAGGATTGCGCGGATGCGGCGGTAGTATTGGAGACCTGCCAACGTGACAACAACAACGGTAACAGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGGTTAGGTCACTACGGTCATCATCCGGACCCGGGAGAGGTCGATCTACCCCCAGAGACCCAGCCCACACCCCCCAGCGCTACCTTAGTCGGCACCACGATCACCCACCTGCGAGATCCCGATCATCATTCGACAGAAATTCAAAACTGCGACAACGTCAAAATCAAATTTGAAACCTTACACACAATGGACTCGTCCGATACCATCGATATCGACAGCCACATGTCAGACAGGGCAAGCGTCAATTCGAAAAATGCCGCGGAAAATGACAATATGATGATGATCACGCCGGAACTACTGGGTCTTATGCCATCCGGGAGTTCGGTTCATTCGGATTCCGGCGAACCCAACGCGAGAGGACACTCGGGACAATCCGGTTCGCATCACCACGGCTCCAAGTCCTGGACGCAGGAGGACATGGACGCGGCTCTCGAAGCGCTGAGGAACCACGACATGAGCCTCACCAAAGCATCGGCAACTTTCGGTATACCTTCCACAACACTTTGGCAACGGGCCCATCGCCTGGGAATCGATACCCCGAAGAAAGACGGACCTACGAAGTCTTGGAGCGACGAGAGCCTAAACAACGCCCTGGAGGCGCTCAGAACCGGAACGATCTCGGCAAATAAGGCATCCAAGGCGTTCGGCATCCCTTCCAGTACGTTGTACAAAATCGCGAGGCGAGAAGGTATCAGGCTGGCCGCTCCGTTCAACGCGAGTCCCACCACGTGGTCGCCAGCGGATCTCGACAGAGCGTTGGAAGCGATAAGATCGGGTCAGACGTCGGTTCAAAGAGCCTCGACGGAATTTGGAATACCCACGGGAACTCTCTACGGCAGGTGTAAGAGGGAGGGGATCGAGCTCAGTAGAAGTAACCCGACGCCCTGGAGTGAAGACGCTATGACGGAAGCTCTCGAAGCTGTTAGGTTGGGTCACATGAGTATCAACCAAGCGGCTATACACTATAACCTGCCGTACTCTTCCCTTTACGGACGCTTCAAAAGAGGAAAATACGAGGAGCCGGTAGGCAATGAAATGTCGCAAGACGGGAGCAGTCCGCATTATCACCATCATCAAAGTCCCCATCAGAATCACTCCTCTTCCCTTCCCGATCAGATGCCTTACCAGGGCAGCTGA
- Protein Sequence
- METDRFWGIHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPREHGGSRLNYAKLKRHHPRYKRPRFEPRSDSRHCEKYKKEEAEGAYGRDDKENHRDWQTEDEDCADAAVVLETCQRDNNNGNSTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDNVKIKFETLHTMDSSDTIDIDSHMSDRASVNSKNAAENDNMMMITPELLGLMPSGSSVHSDSGEPNARGHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVGNEMSQDGSSPHYHHHQSPHQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00460397;
- 80% Identity
- iTF_01538087;