Xxan024830.2
Basic Information
- Insect
- Xestia xanthographa
- Gene Symbol
- retn
- Assembly
- GCA_905147715.1
- Location
- LR990650.1:11362992-11368795[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-20 5.4e-16 60.8 0.0 16 89 60 131 45 131 0.93 2 2 4.1 3.1e+04 -2.6 0.0 25 38 258 271 220 273 0.54
Sequence Information
- Coding Sequence
- ATGCTGCGCGCGCGCATCGTAAAAGCGCGATCTGACTCGCTCGCGCCCGTAAATCATCGATCGTGCGATGCGATGCGATTTAGCACGCTCGCCTTGTTGCCCACTCGACGCGCGTTGTCCCAAGTGAGTAAGCAAACGTCACATATCATCCATTCTAACCCTGAACTATCTGTTGCTGCAGGCACTCCAATCAACCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTACGAGCTGTACAACCTGGTGATAGCTCGCGGTGGGCTGGTGGAGGTCATTAACAAGAAGCTGTGGCAGGAGATCATCAAGGGTCTGCGGCTGCCGTCGTCCATCACGTCTGCTGCCTTCACGTTGCGCACACAATACATGAAATACCTGTATGACTATGAGTGCGAGAAGAAAAATCTATCAACCAGGAGCGAGCTGGACGCAGCTATTGAAGGCAACAAACGTGAGGGTCGCCGCGCCTCGGGGCAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCACTGTCGCTGGGGGGCGTGGCCCCGCGCCTGCCGCCACTGCCGCCGCACGCACCTCACCTGGCGCAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAACAGCAGAGGGAGCTTATGAGAAAtgGCTCCGAATCACCCCCCAGCAACGGCCAAGCGCCAATAATGTCACCCCGCGACGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACCCTCTGGTCGCtctacaacaataacaacaacaacagcccacaaccgGACCTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTCGCGAGCGGCGGCAAGCGCGAGGCGTGCCGctcgcccgcgccgcccgccaaGCGCCGCACGCCGCGCCCCACCTCGCGCCCCCCCTCGCCGCGCGACCACCTGCACTCGCCGCCACAGCACCGCCACAGCCGCAGGGACGCCACATCACCGTCATCGATCAACGGCATGCCCAATACTAATGGTGTCAATGGGGCTGCCTTCAAGATAACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTAGTAGTGTCAATAGAGCTAAACGGAGTAACGTATGAAGGAGTACTCTTCCCCTCAGGCAGCGGTCAGAACGGACACAGACAAATGGTGTcctaa
- Protein Sequence
- MLRARIVKARSDSLAPVNHRSCDAMRFSTLALLPTRRALSQVSKQTSHIIHSNPELSVAAGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLASGGKREACRSPAPPAKRRTPRPTSRPPSPRDHLHSPPQHRHSRRDATSPSSINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGSGQNGHRQMVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -