Xsex023056.1
Basic Information
- Insect
- Xestia sexstrigata
- Gene Symbol
- retn
- Assembly
- GCA_941918865.2
- Location
- CALNXB020000521.1:214450-219526[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-21 9.5e-18 64.9 0.0 12 89 54 129 47 129 0.94 2 2 3.6 1.1e+04 -2.5 0.0 25 38 256 269 218 271 0.54
Sequence Information
- Coding Sequence
- ATGTACTCCTCTATTGGAAGTTACGTCGTGATGAACATGTTCCCAGTGTTCGTGAAGACTCTTTTGTTACATTACGATATATTTGCTATCCTCGATTTTGAATTGCTGCTGTTGTATTTTGAGAATTTTATTGCTGACGGAAGTTTGAACAAGTTGATGTTCTTCCAATACCGGGGCACTCCAATCAACCGGCTACCTATAATGGCGAAGTCGGTGCTAGACCTGTATGAGCTGTACAACTTGGTGATAGCTCGCGGTGGACTAGTGGAGGTCATCAACAAGAAGCTGTGGCAAGAGATCATCAAGGGTCTGCGGCTGCCGTCGTCCATCACGTCTGCTGCCTTCACGTTGCGCACACAATACATGAAATACCTGTACGACTACGAGTGCGAGAAGAAGAACCTATCAACCAGGAGTGAGCTGGACGCAGCTATTGAAGGCAACAAGCGTGAGGGTCGCCGCGCCTCAGGGCAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAATCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCACTGTCGCTGGGGGGCGTGGCCCCGCGCCTGCCGCCACTGCCGCCGCATGCGCCTCACCTGGCGCAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCACCTCCCAGCAACGGTCAAGCGCCAATAATGTCACCCCGCGACGCCGCCCTCAGTGCCATTGACGTCTCCCGCCTCACCCTCTGGTCGCTCTACAACAATAACAACAACAACAGCCCACAACCGGACCTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTGACGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCGCCTCGCCGCGCGACCTGCCCTCGCCGCCACAGCACCGCCACAGCCGCAGGGACGCCACGTCGCCGCCACCGATCAACGGCATGCCCAATACTAATGGTGTCAATGGAGCTGCCTTCAAGATAACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTAGTGGTATCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTCCCCTCAGGCAACGGTCAAAACGGACACAGACAAATGGTGTCCTAA
- Protein Sequence
- MYSSIGSYVVMNMFPVFVKTLLLHYDIFAILDFELLLLYFENFIADGSLNKLMFFQYRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPASPRDLPSPPQHRHSRRDATSPPPINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -