Basic Information

Insect: Xestia rhomboidea
Gene Symbol: -
Assembly: GCA_963853795.1
Location: OY970783.1:3423507-3478785[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.011 1.1 10.9 0.1 1 23 521 544 521 544 0.95

2 17 0.17 18 7.1 2.2 2 21 670 689 670 690 0.94

3 17 0.017 1.7 10.3 4.8 2 23 753 774 752 774 0.95

4 17 1.6 1.6e+02 4.1 0.9 1 23 786 810 786 810 0.90

5 17 0.00016 0.017 16.6 0.3 2 23 817 840 816 840 0.97

6 17 0.27 28 6.5 0.4 1 23 846 868 846 868 0.93

7 17 0.0042 0.43 12.2 2.9 1 23 874 896 874 896 0.98

8 17 1.3 1.3e+02 4.4 1.5 2 19 907 924 906 927 0.89

9 17 0.36 37 6.1 0.1 1 23 1006 1028 1006 1028 0.97

10 17 2.6 2.6e+02 3.4 7.2 1 23 1035 1057 1035 1057 0.95

11 17 0.0017 0.18 13.4 1.8 1 23 1100 1123 1100 1123 0.95

12 17 0.001 0.11 14.1 0.6 1 23 1130 1153 1130 1153 0.97

13 17 0.019 1.9 10.1 0.2 2 23 1175 1197 1174 1197 0.96

14 17 0.0018 0.19 13.3 3.1 3 23 1223 1244 1222 1244 0.95

15 17 0.00038 0.039 15.5 1.2 1 23 1268 1290 1268 1290 0.96

16 17 0.00015 0.015 16.7 0.1 1 23 1296 1318 1296 1318 0.97

17 17 0.00048 0.049 15.1 0.7 3 23 1326 1347 1324 1347 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.011	1.1	10.9	0.1	1	23	521	544	521	544	0.95
2	17	0.17	18	7.1	2.2	2	21	670	689	670	690	0.94
3	17	0.017	1.7	10.3	4.8	2	23	753	774	752	774	0.95
4	17	1.6	1.6e+02	4.1	0.9	1	23	786	810	786	810	0.90
5	17	0.00016	0.017	16.6	0.3	2	23	817	840	816	840	0.97
6	17	0.27	28	6.5	0.4	1	23	846	868	846	868	0.93
7	17	0.0042	0.43	12.2	2.9	1	23	874	896	874	896	0.98
8	17	1.3	1.3e+02	4.4	1.5	2	19	907	924	906	927	0.89
9	17	0.36	37	6.1	0.1	1	23	1006	1028	1006	1028	0.97
10	17	2.6	2.6e+02	3.4	7.2	1	23	1035	1057	1035	1057	0.95
11	17	0.0017	0.18	13.4	1.8	1	23	1100	1123	1100	1123	0.95
12	17	0.001	0.11	14.1	0.6	1	23	1130	1153	1130	1153	0.97
13	17	0.019	1.9	10.1	0.2	2	23	1175	1197	1174	1197	0.96
14	17	0.0018	0.19	13.3	3.1	3	23	1223	1244	1222	1244	0.95
15	17	0.00038	0.039	15.5	1.2	1	23	1268	1290	1268	1290	0.96
16	17	0.00015	0.015	16.7	0.1	1	23	1296	1318	1296	1318	0.97
17	17	0.00048	0.049	15.1	0.7	3	23	1326	1347	1324	1347	0.95

Sequence Information

Coding Sequence: ATGACGGAGGCGCATGAACCTTTGATCCTGTGCATGGAGAATGCAACGGGCGAAGAGGTAGCACTTAGAATAGAACCAGATGATAATTTCCAGATGTTTTTGGATAAAGCCAGAACTCTCCTAGGCTACGACGTAGAAATAAACTCGATAACCAGAAATCAACCAGTCTCGCTCTCAGAAAACGTCTACCAATTCCTTATCAACGCCGAACAGAACCTACAAGCAGATGACCTAACACAAAACTTCGATCCAATCTTGGACACCAATGATGGAGCCAACGACTTGGTCTACATATTGGATGATGGCACACAGATCCGTGCTTCTCAAATACATTTTGACAATGATGATCCTCTGGTAGATCTTACAGCTGAGAAAATACCTTTTGTTAAATACGCTGATGACGCTACCGATGTAGATGTTGACGACAACGGTGTTCATGAAACTGAAAAGATTAATATATGTGAAAGTCCCGTCTCTAAATGGTCGAGTAAAAACTCTTGTCCGAAATGCAGCTTCGTCAATTCCCTACCGTTCAAATTAGTATGCAATAATACGTCCGGTTTCGAAGCTCAATTCACGAAATATTTAGAagataataatactaaaacttacGCGACTTTGAACCCTGTTACAACCAGAAATAAATCtccaaaaagtttaataaaggaCAATTTTAAGAACTATGATGATAGTTATCAGAGGAACGACAATTTATCTTACACTCGAGAGGAGATCTTGAACATGTTTAAAGACTCCCCGATGACGTCATTGCCTTATGATCAGGGTTACAGCGAGAGGAGACATGTACGGAAAACTGACCCTTCAAGACTTGTTCATAAGAACTGGAGCAAGCCACTTTCCTATGTCGATATAGACGGTGTTTTGATAGGAGAAAGTGAGAGCCAAATCTGTTTTATTTGCGGCAAACATGTCGATAACAACGTGGATAAATTGTACCTCTTTGATAATGAAGACCAACGGTTACATAGGTGTTCTCCGCAAAAGAAAATGTCGACGCAATTGAAAATTATCTGTGAATGTTGTCTCAACGAGAACTTTACTCCCTGTCGAATGAAAGGTGCTAACCAATTCTTAAACCCAGATGAATATCTCGTTATTAGAAATAACCAGCAATACATCTTCCAAAAGGTTAAAAACTTCAATTTCGCGCATTTAGGGAAACCTAAAGAGACCATAACCAAGATAGATAAGAAAATAGACAAGGAGGAGTTTGTTAAAGTCGAAATTGGTTCTGATGGAGAAATTATCACCAAACCCATAGACAATAGGTCTGATGACGTCATAATAGTTAAAGATGAGGACAAGGAGGGTAGTTCAAGTGACGTAGAGATTGTAGAGCCGGAACCGGAAATAGATAATTTCATAGACAATTTGGAGGATGCTGATGAGGAGGTTAAAGAGTTTCTGGGGAAATATCAAGTTGATGATAGTGAAGTTACTGAATTGAAATGcagATTCTGTGAGCAAATATTTCCAGACCTAACGGCTGTGGCAGATCACTGTGAAACGCACAAACATGACCTGGAAGACGGCGAAGTGTTTCCTTGTCTGCTGTGTAATTATGGTTATGCAAACTTAAAATGGCTGAAAGCCCATTTGAAGGCGGCCCACGAGAAGACTGAAGCCCCTAAAgtattaaaagaagaaaatgaagCAGTGAAAGAGGAAGATAAAGATGATGAAGAAGCACCTGCTAAAGCATCATCACCGATCGCTACTCGCACTAGAAGTTCTAGTAAAAAAGAGGATGGCGATAGAAAAGAGAATGAAAAGTCAGACGAAATAAAGGCTGATTCTAATACCGAGACGGTGACCGAGCCACCCATCATAAAAACGGAGGTAAAGCAAGAATGCTTAGACAGCAGCGAGGATGAGATATGGATCGTTCAGACTGCTGATGTTGAGGCCACTCAGGAGCTGCAGAAACTACTGTGTAGCACCCAGGTGAAAGAAGTCGGCCAGGATGGTCAATCTGAGAAGACACCCAAATGTTTCAATTGcagTCAAGTATTCGCGAACGCAGAGGGCCTGTCACACCATCGCTGTAGACGACGTAACAGGAAACGGAAGTCCAAAGACCTGACCAACCTCATATGTATACCTTCTGAGGAAGACTTCTTGAAGAGAGCTCAGGGGCGTCCCCGACCACCTGATACAACAATAGACAATGATCTCCTCGTTATGCTTCCCCGCAAGCGTGGCAAACGGGAACTGACCTCCAACCCCCAGGTGGTGACCTGCCACAACTGTAACAAGTCGTTCACTTCCAAAGTTAGACTCAAGTTTCATATGCAGTTCCACGAAACATCAAACCAAGCCCGAACAGACGGACGCTACTCTTGCTCCGAGTGCAACGACGCCACCTTCGCCACGGAGACGGAACTGTTCGACCACGTGCACTTCCAGCACGACAAACAGAAGAGGTGGCAGTGTCCCGTCGAGGGCTGCGGGAAGACCTTCTTCCTCAGGGCTACCCTTACGAAACACAGTCGCACGCACACCGACACGCGGAGATACGTGTGCGTCACGTGCAACAAGCGGTTCTTAGACAAACAGACGCTAGACGAGCACGGAGTCACGCATTTACAGATCAAACCCTTCCAGTGCCACATCTGCCTGAAGCAGCTGACGCGGCGCTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGCCTGGTGTGCGTGTGCGCCGTCTGCACCAGGGCCTTCAGGGACCATCGCCATGCAGAGGAGCACGCGACCAAATCAAAGGAATGCATCGAAGCGTTTGCCAACGAGTTAAAAGAAGAGGTGGAAGAGGTATCCGTACAGTTGTCTCCCACCAGTGGCCTTGTGAGACACGCCGTGCAGATTTTTGAATCACCAAAACTATCAAAGCCGATTAAACGGCAAGTATCACCAGAAGTAGCCTTCCCACTGCTGTCTCAGCTGGCAGATGAAGCGCGCGCTCTGATCAGAGTGGTCGAGATCGAGAAGGCATTCCGATGCGAGTATTGTGAAGATGTGTTTTACTTGGAGGGCCGTCTGAACGCTCACCGCGCGATACACAAGGGCGTCAAGAACCCTTTCACTTGCCACATCTGTAAAGTTAGCTTCGCTACGTATTCCAGATGCACAACCCACAAAACAACCCACGGTTTCTACAAGCGCTCACTAGCCGACGCGAAGAAGCAAGCCGACGGCCACGCACAGTCCAACGCCGACTCGGCTCGCTCCGCCACCGGCATACTGGGATACGGCGACTTTCCTGTAGTCAAACACTTCTTGTGCGAGGACTGTGGGCGCTCATACCTGCACTGGACGTACCTACAGGTGCACAGGCGCATGAAACACGCGAATGAAAACTTCCTGTACAACTGTAACCAGTGCGAGCTGACCTTTCCTAACAGTTGGAGCCTGGCATATCATCGCAAGAAGGTGCACGGCAAGACTGGAGCCGACGACCCTGGTACCACCAACAAGAATAACAGAGATGATTATAGGATACCGTGTCGAGATTGTAGCGAGGTGTTGCCGAACAAGACAGCTTTGTATAAGCACAGGAAGAAAGAACACAGCGGTGGAACTACACGGGGATATACTAAACCAGGCACGTATACGAACGCACAGTCGGATTCTACAGGCGGCGCGTGTCCTCATTGTCAAGCCACGTTTACTCACGCTACAGATCTGCACAAACATGTCAAAGAGGTCCACGGTAAAGACGACGACTCCTGCCAATCTTGCAACAAGACAACGACCGATGGGACATGTCCGCGCCGTCCGCACGCCTGTCCGGTCTGCGGACACGCCTTCCGGACACTGTCCATGCGGAATGAACATTTGAGAGTACATACGGGTGAAAGACCCTTCCCTTGTGATGTTTGTGGAGTCGCTTTTAGGAGGTCGACAGCCATGCGCAACCACCGCCTCATCCACACGGGGGTCCGGGCGTGGGCGTGCGGGCGCTGCCCCAAGCGGTTCCGCATCCGCTCCGACCTGCGCACGCATCTGCGACTCAAACATCCCGCTACTATCGTAGTTGTTGAGATGGAAGGCCTAAACCCGACGTCTGACGAAGTACTGAAGGCACTCGCAGTACAAAACGTTCCACACGACAAACTTATAGATATCACCAAGATGTCCTTCATCAAGGGCTCCACCAGTGTCATTCCGTCGTCGGCGCGCGCGCTGTCGGCCCTGGACAACGTGCCGCGCACGCACGTCGCGTGCATCAAGCCGGAGCCCACACTGGAAGATTTCCAACCGGCCCGGCGAGGTCGCGGCATCGCCAAGAACCCGCGGCGACCCAAGATACTACAGCGGGGCGAGGACGACCCACAAGATAACTCTGCTTACCCCATCGTTGGCGGAGAGCTATCAGACTTAAACGTGCAGCTACTGCTCCGTGAGGGCGGGGTGCTCGTCAACGGCAACCAGATGGTGCAGCTGCAGCTGGACGACCCTATCCTGATGGAGTAA
Protein Sequence: MTEAHEPLILCMENATGEEVALRIEPDDNFQMFLDKARTLLGYDVEINSITRNQPVSLSENVYQFLINAEQNLQADDLTQNFDPILDTNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADDATDVDVDDNGVHETEKINICESPVSKWSSKNSCPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEDNNTKTYATLNPVTTRNKSPKSLIKDNFKNYDDSYQRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKNWSKPLSYVDIDGVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRLHRCSPQKKMSTQLKIICECCLNENFTPCRMKGANQFLNPDEYLVIRNNQQYIFQKVKNFNFAHLGKPKETITKIDKKIDKEEFVKVEIGSDGEIITKPIDNRSDDVIIVKDEDKEGSSSDVEIVEPEPEIDNFIDNLEDADEEVKEFLGKYQVDDSEVTELKCRFCEQIFPDLTAVADHCETHKHDLEDGEVFPCLLCNYGYANLKWLKAHLKAAHEKTEAPKVLKEENEAVKEEDKDDEEAPAKASSPIATRTRSSSKKEDGDRKENEKSDEIKADSNTETVTEPPIIKTEVKQECLDSSEDEIWIVQTADVEATQELQKLLCSTQVKEVGQDGQSEKTPKCFNCSQVFANAEGLSHHRCRRRNRKRKSKDLTNLICIPSEEDFLKRAQGRPRPPDTTIDNDLLVMLPRKRGKRELTSNPQVVTCHNCNKSFTSKVRLKFHMQFHETSNQARTDGRYSCSECNDATFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCNKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVCVCAVCTRAFRDHRHAEEHATKSKECIEAFANELKEEVEEVSVQLSPTSGLVRHAVQIFESPKLSKPIKRQVSPEVAFPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLEGRLNAHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGHAQSNADSARSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYNCNQCELTFPNSWSLAYHRKKVHGKTGADDPGTTNKNNRDDYRIPCRDCSEVLPNKTALYKHRKKEHSGGTTRGYTKPGTYTNAQSDSTGGACPHCQATFTHATDLHKHVKEVHGKDDDSCQSCNKTTTDGTCPRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPTSDEVLKALAVQNVPHDKLIDITKMSFIKGSTSVIPSSARALSALDNVPRTHVACIKPEPTLEDFQPARRGRGIAKNPRRPKILQRGEDDPQDNSAYPIVGGELSDLNVQLLLREGGVLVNGNQMVQLQLDDPILME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_01064943;
80% Identity: -